mRNA_M-pyrifera_M_contig85621.19964.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85621.19964.1
Unique NamemRNA_M-pyrifera_M_contig85621.19964.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A2D8GIM1_9ACTN (Glycine--tRNA ligase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GIM1_9ACTN)

HSP 1 Score: 523 bits (1346), Expect = 2.820e-184
Identity = 248/286 (86.71%), Postives = 267/286 (93.36%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKT+AGPV ++AAEVYLRPETAQGMFINFANVLNTSRK+PPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPP E+Q+WYEYWCQ RMDWYLDLGM   +++LR HDDDELSHYSSGTSDVE+LFPWGWDELEGIANRGDFDLTQHA  SGEKLD+F+QA+ ERY PHVIEPAAGATRTAMAFLM AYDEE VNDDTR VLRLDHRLAPYK+AVLPLSKK+TLTPTA EV D +K RWM DYDETQSIGKRYARQDE+GTPYCVTVDFDTLDD+AVT
Sbjct:  130 FNLMFKTHAGPVTETAAEVYLRPETAQGMFINFANVLNTSRKRPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPAESQEWYEYWCQTRMDWYLDLGMDPAKIKLRAHDDDELSHYSSGTSDVEYLFPWGWDELEGIANRGDFDLTQHATHSGEKLDFFNQANXERYVPHVIEPAAGATRTAMAFLMDAYDEEVVNDDTRAVLRLDHRLAPYKIAVLPLSKKDTLTPTAMEVXDSLKRRWMVDYDETQSIGKRYARQDEVGTPYCVTVDFDTLDDRAVT 415
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A7Y1U4K6_9ACTN (Glycine--tRNA ligase n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y1U4K6_9ACTN)

HSP 1 Score: 501 bits (1289), Expect = 1.310e-175
Identity = 235/286 (82.17%), Postives = 262/286 (91.61%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKT+AGPV  S  EVYLRPETAQGMF++F NVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEME+FVPP +A +WYEYW   RM WYLDLGMP  ++R+R HD DELSHYSSGT+DVE+ FPWGWDELEGIANRGD+DLTQHA  SGE+++YFDQ + ER+ PHVIEPAAGATRTA AFL+AAYDEETVNDDTRTVLRLD RLAP+KVAVLPLSKK+TLTPTAHEVFDMVKGRWM+DYDETQ+IG+RY RQDEIGTP+CVTVDFDTL+D+AVT
Sbjct:  129 FNLMFKTHAGPVEGSGHEVYLRPETAQGMFVDFMNVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEYFVPPGDADEWYEYWKNERMKWYLDLGMPEAKIRMREHDADELSHYSSGTADVEYFFPWGWDELEGIANRGDYDLTQHAEHSGERIEYFDQQANERWVPHVIEPAAGATRTAFAFLLAAYDEETVNDDTRTVLRLDARLAPFKVAVLPLSKKDTLTPTAHEVFDMVKGRWMSDYDETQAIGRRYRRQDEIGTPFCVTVDFDTLEDRAVT 414
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A6B1AY16_9ACTN (Glycine--tRNA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AY16_9ACTN)

HSP 1 Score: 497 bits (1279), Expect = 4.210e-174
Identity = 235/286 (82.17%), Postives = 256/286 (89.51%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKT+AGP+ DS AEVYLRPETAQG+F NFANVL TSRK+PPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPD+A  W+ YWC  R++WYLDLG+P  ++RLRPHD DELSHYSSGTSD+E+ FPWGWDELEGIANRGDFDLT H   SGE+L+YFDQ +   Y PHVIEPAAGATR AMAFLMAAYDEETVND  RTVLRLD RLAPYKVAVLPLS K+TLTPTA EVF +VK RWMADYD+TQSIGKRYARQDEIGTPYCVTVDFDTLDD+AVT
Sbjct:  129 FNLMFKTHAGPMVDSTAEVYLRPETAQGIFTNFANVLQTSRKRPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDDADHWFNYWCDQRLEWYLDLGIPEADVRLRPHDSDELSHYSSGTSDLEYRFPWGWDELEGIANRGDFDLTVHTAHSGERLEYFDQTNNRHYVPHVIEPAAGATRAAMAFLMAAYDEETVNDSVRTVLRLDPRLAPYKVAVLPLSNKDTLTPTAQEVFKVVKLRWMADYDQTQSIGKRYARQDEIGTPYCVTVDFDTLDDRAVT 414
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A6I3BY33_9ACTN (Glycine--tRNA ligase n=3 Tax=root TaxID=1 RepID=A0A6I3BY33_9ACTN)

HSP 1 Score: 497 bits (1279), Expect = 8.420e-174
Identity = 235/286 (82.17%), Postives = 257/286 (89.86%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKT+AGP+ +SAAEVYLRPETAQGMF+NF+NVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQME+EFFVPP +A QWYEYWCQ RM WYLD GMP ++LRLR HD DELSHYSSGTSDVEFLFPWGWDELEGIANRGD+DLTQHA  SG+KLDYFDQ +  RY PHVIEPAAGATRT MAFL+AAYDEE V  +TR VLRL HRLAPYKVAVLPLSKK+TL P A EV  MV+ RWM DYDETQ+IG+RY RQDE+GTPYCVT+DFDTLDD+AVT
Sbjct:  149 FNLMFKTHAGPMVESAAEVYLRPETAQGMFVNFSNVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMELEFFVPPADAAQWYEYWCQTRMQWYLDHGMPPEKLRLRAHDADELSHYSSGTSDVEFLFPWGWDELEGIANRGDYDLTQHAMHSGDKLDYFDQETNTRYRPHVIEPAAGATRTMMAFLLAAYDEEDVRGETRVVLRLHHRLAPYKVAVLPLSKKDTLVPVAQEVLAMVQPRWMCDYDETQAIGRRYRRQDELGTPYCVTIDFDTLDDRAVT 434
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A7C7WC74_9ACTN (Glycine--tRNA ligase n=6 Tax=root TaxID=1 RepID=A0A7C7WC74_9ACTN)

HSP 1 Score: 494 bits (1271), Expect = 6.680e-173
Identity = 233/286 (81.47%), Postives = 257/286 (89.86%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKT+AGP+ +SAAEVYLRPETAQGMF+NFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPP+++ +WY YWC ARMDWYLDLGMP D LRLR HD DELSHYS+GTSDVEF FPWGWDELEGIANR DFDL +HA +SG KL+Y D ASGERY PHVIEPAAGATRTAMAFLMAAYDEE VNDD RTVLRLDHRLAPYKVAVLPLSKK  L   ++EV  +++  WM DYD+TQ+IG+RY RQDEIGTPYCVT+DFDTL+D+AVT
Sbjct:  127 FNLMFKTHAGPMVESAAEVYLRPETAQGMFVNFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPEDSDEWYHYWCGARMDWYLDLGMPEDRLRLREHDADELSHYSTGTSDVEFAFPWGWDELEGIANRTDFDLKRHAESSGTKLEYHDPASGERYVPHVIEPAAGATRTAMAFLMAAYDEEEVNDDVRTVLRLDHRLAPYKVAVLPLSKKPELIEPSNEVLGLLQPHWMCDYDQTQAIGRRYRRQDEIGTPYCVTIDFDTLEDRAVT 412
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A7V9B2L1_9ACTN (Glycine--tRNA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9B2L1_9ACTN)

HSP 1 Score: 489 bits (1260), Expect = 3.140e-171
Identity = 232/286 (81.12%), Postives = 255/286 (89.16%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKT+AGPV  + AEVYLRPETAQGMF+NF NVL TSRKKPPFGIAQ+GKSFRNEITPGNFVFRTREFEQMEMEFFVPP +A +WYEYWCQ RMDWY+ LGMP D+LRLRPH+ DELSHYSSGTSDVEFLFPWGWDELEGIANRG++DL QHA  SGEKL++FDQA+ ERY PHVIEPAAGATRTAMAFLMAAYDEE VND+ R VLRL  RLAP+KVAVLPLSKKE LTPTA EV  +++  W  DYDETQ+IG+RY RQDEIGTP CVTVDFDTLDD+AVT
Sbjct:  127 FNLMFKTHAGPVEGAGAEVYLRPETAQGMFVNFKNVLETSRKKPPFGIAQVGKSFRNEITPGNFVFRTREFEQMEMEFFVPPADATKWYEYWCQERMDWYISLGMPEDKLRLRPHEADELSHYSSGTSDVEFLFPWGWDELEGIANRGEYDLVQHAKHSGEKLEFFDQAANERYVPHVIEPAAGATRTAMAFLMAAYDEEEVNDEKRVVLRLHPRLAPFKVAVLPLSKKEELTPTAREVLRLLQPHWQTDYDETQAIGRRYRRQDEIGTPLCVTVDFDTLDDRAVT 412
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: UPI001E36FFE7 (glycine--tRNA ligase n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E36FFE7)

HSP 1 Score: 489 bits (1258), Expect = 4.630e-171
Identity = 230/286 (80.42%), Postives = 255/286 (89.16%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKTNAGPV   +A  YLRPETAQGMFINFANVLN SRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQME+EFFVPP+EA QWYEYWCQ R  WY+DLG+P D+LR+RPHD DELSHYSSGTSDVEFLFPWGW ELEG+ANRGD+DLTQHA  SGEKLD+FDQA+  RYTPHVIEPAAGATRT MAFL++AYDEE V  + RTVLRL HRLAPYKVAVLPLSKK+TLTP A EV  +++  +M DYDETQ+IG+RY RQDE+GTPYCVTVDFD+LDD+AVT
Sbjct:  119 FNLMFKTNAGPVESDSAVAYLRPETAQGMFINFANVLNASRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMELEFFVPPEEADQWYEYWCQQRYQWYVDLGIPEDKLRMRPHDPDELSHYSSGTSDVEFLFPWGWGELEGVANRGDYDLTQHATHSGEKLDFFDQATNTRYTPHVIEPAAGATRTMMAFLLSAYDEEEVRGEVRTVLRLHHRLAPYKVAVLPLSKKDTLTPLAREVLGLLQPSFMCDYDETQAIGRRYRRQDELGTPYCVTVDFDSLDDRAVT 404
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A2E1YBI9_9ACTN (Glycine--tRNA ligase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E1YBI9_9ACTN)

HSP 1 Score: 488 bits (1255), Expect = 1.320e-170
Identity = 226/286 (79.02%), Postives = 255/286 (89.16%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKT+AGPV  +   VYLRPETAQGMF NF  VL TSRKKPPFGIAQ+GKSFRNEITPGNFVFRTREFEQMEME+FVPPD+A  WYEYWC+ RM+WY+DLG+P D+LRLRPHD DELSHYSSGTSDVEFLFPWGW ELEG+ANRGD+DL QH+  SGEKL YFD   GE Y PHVIEPAAGATR+ MAFL+AAYDEETVNDD RTVLR D R+APYK+AVLPLSKK+T+TP A+EVFD+VK RWMADYDETQ+IGKRY RQDE+GTPYC+T+DFD+L+D+AVT
Sbjct:  119 FNLMFKTHAGPVEGAGHAVYLRPETAQGMFTNFKLVLETSRKKPPFGIAQVGKSFRNEITPGNFVFRTREFEQMEMEYFVPPDQADMWYEYWCKERMNWYIDLGIPKDQLRLRPHDQDELSHYSSGTSDVEFLFPWGWGELEGVANRGDYDLRQHSEHSGEKLTYFDPELGEHYIPHVIEPAAGATRSMMAFLIAAYDEETVNDDLRTVLRFDPRIAPYKIAVLPLSKKDTITPLANEVFDLVKDRWMADYDETQNIGKRYRRQDELGTPYCITIDFDSLEDQAVT 404
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BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A432JSB6_9ACTN (Glycine--tRNA ligase n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A432JSB6_9ACTN)

HSP 1 Score: 485 bits (1249), Expect = 1.480e-169
Identity = 231/286 (80.77%), Postives = 253/286 (88.46%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+F+T+AGP+AD+AAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEA +WY YWC AR  WYLDLGMPAD LRLR H+ DELSHYS  T+DVEFLFPWGWDELEGIANR DFDL +HA +SG +L+Y D  SGERY PHVIEPAAGATRTA+AFLMAAYDEE V  DTRTVLRLDHRLAPYKVAVLPLSKK  L   + EV  +++  WM DYD+TQ+IG+RY RQDEIGTPYCVT+DFDTLDD+AVT
Sbjct:  127 FNLMFQTHAGPLADTAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEADKWYGYWCDARRSWYLDLGMPADRLRLREHEADELSHYSKATADVEFLFPWGWDELEGIANRTDFDLLRHAESSGVRLEYHDSGSGERYVPHVIEPAAGATRTALAFLMAAYDEEEVRGDTRTVLRLDHRLAPYKVAVLPLSKKAELIQPSTEVLGLLQPHWMCDYDQTQAIGRRYRRQDEIGTPYCVTIDFDTLDDRAVT 412
[Close]
BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Match: A0A2E5P1J6_9ACTN (Glycine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A0A2E5P1J6_9ACTN)

HSP 1 Score: 485 bits (1248), Expect = 2.100e-169
Identity = 230/286 (80.42%), Postives = 253/286 (88.46%), Query Frame = 1 
Query:    1 FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWYLDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDFDLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEETVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMADYDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT 858
            FNL+FKT+AGP+ +SAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPD++ +WY YWC ARM WY DLGMP D LRLR HD DELSHYS+ T+DVEFLFPWGWDELEGIANR DFDL +HA ++G KL+Y D  SG+RY PHVIEPAAGATRTAMAFLMAAYDEE VNDD RTVLRLDHRLAPYK AVLPLSKK  L   ++EV  +++  WM DYDETQ+IG+RY RQDEIGTPYCVTVDFDTL+D+AVT
Sbjct:  127 FNLMFKTHAGPMVESAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQIGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDDSAEWYRYWCDARMSWYRDLGMPEDLLRLREHDSDELSHYSTSTADVEFLFPWGWDELEGIANRTDFDLRRHAESAGAKLEYHDPNSGDRYVPHVIEPAAGATRTAMAFLMAAYDEEEVNDDIRTVLRLDHRLAPYKAAVLPLSKKAELVEPSNEVLGLLQPHWMCDYDETQAIGRRYRRQDEIGTPYCVTVDFDTLEDRAVT 412
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85621.19964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8GIM1_9ACTN2.820e-18486.71Glycine--tRNA ligase n=4 Tax=Acidimicrobiaceae bac... [more]
A0A7Y1U4K6_9ACTN1.310e-17582.17Glycine--tRNA ligase n=2 Tax=Acidimicrobiales bact... [more]
A0A6B1AY16_9ACTN4.210e-17482.17Glycine--tRNA ligase n=1 Tax=Acidimicrobiaceae bac... [more]
A0A6I3BY33_9ACTN8.420e-17482.17Glycine--tRNA ligase n=3 Tax=root TaxID=1 RepID=A0... [more]
A0A7C7WC74_9ACTN6.680e-17381.47Glycine--tRNA ligase n=6 Tax=root TaxID=1 RepID=A0... [more]
A0A7V9B2L1_9ACTN3.140e-17181.12Glycine--tRNA ligase n=1 Tax=Acidimicrobiia bacter... [more]
UPI001E36FFE74.630e-17180.42glycine--tRNA ligase n=1 Tax=Rhabdothermincola sp.... [more]
A0A2E1YBI9_9ACTN1.320e-17079.02Glycine--tRNA ligase n=4 Tax=Acidimicrobiaceae bac... [more]
A0A432JSB6_9ACTN1.480e-16980.77Glycine--tRNA ligase n=4 Tax=Actinobacteria TaxID=... [more]
A0A2E5P1J6_9ACTN2.100e-16980.42Glycine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A0... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85621contigM-pyrifera_M_contig85621:3..860 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score453.4
Seed ortholog evalue8e-125
Seed eggNOG ortholog1313172.YM304_24260
Preferred nameglyQS
KEGG rclassRC00055,RC00523
KEGG koko:K01880
KEGG ReactionR03654
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494
EggNOG free text desc.Catalyzes the attachment of glycine to tRNA(Gly)
EggNOG OGs2GIT3@201174,4CMWI@84992,COG0423@1,COG0423@2
EC6.1.1.14
COG Functional cat.J
BiGG ReactioniSB619.SA_RS07880
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Exons1
Model size858
Cds size858
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816766.075858-CDS-M-pyrifera_M_contig85621:2..8601622816766.075858-CDS-M-pyrifera_M_contig85621:2..860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85621 3..860 +
1692278165.5245843-CDS-M-pyrifera_M_contig85621:2..8601692278165.5245843-CDS-M-pyrifera_M_contig85621:2..860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85621 3..860 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85621.19964.1prot_M-pyrifera_M_contig85621.19964.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85621 3..860 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85621.19964.1

>prot_M-pyrifera_M_contig85621.19964.1 ID=prot_M-pyrifera_M_contig85621.19964.1|Name=mRNA_M-pyrifera_M_contig85621.19964.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
FNLIFKTNAGPVADSAAEVYLRPETAQGMFINFANVLNTSRKKPPFGIAQ
IGKSFRNEITPGNFVFRTREFEQMEMEFFVPPDEAQQWYEYWCQARMDWY
LDLGMPADELRLRPHDDDELSHYSSGTSDVEFLFPWGWDELEGIANRGDF
DLTQHANASGEKLDYFDQASGERYTPHVIEPAAGATRTAMAFLMAAYDEE
TVNDDTRTVLRLDHRLAPYKVAVLPLSKKETLTPTAHEVFDMVKGRWMAD
YDETQSIGKRYARQDEIGTPYCVTVDFDTLDDKAVT
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mRNA from alignment at M-pyrifera_M_contig85621:3..860+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85621.19964.1 ID=mRNA_M-pyrifera_M_contig85621.19964.1|Name=mRNA_M-pyrifera_M_contig85621.19964.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig85621:3..860+ (Macrocystis pyrifera P11B4 male)
TTCAACCTGATTTTCAAGACCAACGCCGGACCGGTGGCCGATTCCGCCGC
CGAGGTCTATCTGCGCCCCGAGACCGCGCAGGGCATGTTCATCAACTTCG
CCAATGTGCTCAACACGAGCCGCAAGAAGCCGCCCTTCGGCATCGCCCAG
ATCGGCAAGTCGTTCCGCAACGAGATCACGCCGGGCAACTTCGTCTTCCG
CACCCGCGAATTCGAGCAGATGGAGATGGAGTTCTTCGTGCCGCCCGACG
AGGCGCAGCAGTGGTACGAGTACTGGTGCCAGGCCCGCATGGACTGGTAC
CTCGACCTCGGCATGCCGGCCGACGAGCTGCGCCTGCGGCCCCACGACGA
CGACGAACTGAGCCACTACTCGTCGGGCACCTCCGACGTCGAGTTCCTCT
TCCCGTGGGGGTGGGACGAGCTCGAGGGCATCGCCAACCGGGGCGACTTC
GACCTCACCCAACACGCCAACGCGTCGGGCGAGAAGCTCGACTACTTCGA
CCAGGCGTCGGGCGAGCGCTACACCCCCCACGTGATCGAGCCGGCGGCGG
GTGCCACCCGCACCGCCATGGCGTTCCTCATGGCGGCCTACGACGAAGAG
ACGGTCAACGACGACACCCGCACGGTGCTGCGTCTCGACCATCGTCTCGC
CCCCTACAAGGTGGCCGTGCTGCCGTTGAGCAAGAAGGAGACCCTCACCC
CGACCGCCCATGAGGTGTTCGACATGGTGAAGGGTCGCTGGATGGCCGAC
TACGACGAGACCCAGTCGATCGGCAAGCGCTATGCCCGCCAGGACGAGAT
CGGCACGCCCTACTGCGTCACCGTCGACTTCGACACGCTCGACGACAAGG
CCGTCACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85621:3..860+

>mRNA_M-pyrifera_M_contig85621.19964.1 ID=mRNA_M-pyrifera_M_contig85621.19964.1|Name=mRNA_M-pyrifera_M_contig85621.19964.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig85621:3..860+ (Macrocystis pyrifera P11B4 male)
TTCAACCTGATTTTCAAGACCAACGCCGGACCGGTGGCCGATTCCGCCGC
CGAGGTCTATCTGCGCCCCGAGACCGCGCAGGGCATGTTCATCAACTTCG
CCAATGTGCTCAACACGAGCCGCAAGAAGCCGCCCTTCGGCATCGCCCAG
ATCGGCAAGTCGTTCCGCAACGAGATCACGCCGGGCAACTTCGTCTTCCG
CACCCGCGAATTCGAGCAGATGGAGATGGAGTTCTTCGTGCCGCCCGACG
AGGCGCAGCAGTGGTACGAGTACTGGTGCCAGGCCCGCATGGACTGGTAC
CTCGACCTCGGCATGCCGGCCGACGAGCTGCGCCTGCGGCCCCACGACGA
CGACGAACTGAGCCACTACTCGTCGGGCACCTCCGACGTCGAGTTCCTCT
TCCCGTGGGGGTGGGACGAGCTCGAGGGCATCGCCAACCGGGGCGACTTC
GACCTCACCCAACACGCCAACGCGTCGGGCGAGAAGCTCGACTACTTCGA
CCAGGCGTCGGGCGAGCGCTACACCCCCCACGTGATCGAGCCGGCGGCGG
GTGCCACCCGCACCGCCATGGCGTTCCTCATGGCGGCCTACGACGAAGAG
ACGGTCAACGACGACACCCGCACGGTGCTGCGTCTCGACCATCGTCTCGC
CCCCTACAAGGTGGCCGTGCTGCCGTTGAGCAAGAAGGAGACCCTCACCC
CGACCGCCCATGAGGTGTTCGACATGGTGAAGGGTCGCTGGATGGCCGAC
TACGACGAGACCCAGTCGATCGGCAAGCGCTATGCCCGCCAGGACGAGAT
CGGCACGCCCTACTGCGTCACCGTCGACTTCGACACGCTCGACGACAAGG
CCGTCACCTTCAACCTGATTTTCAAGACCAACGCCGGACCGGTGGCCGAT
TCCGCCGCCGAGGTCTATCTGCGCCCCGAGACCGCGCAGGGCATGTTCAT
CAACTTCGCCAATGTGCTCAACACGAGCCGCAAGAAGCCGCCCTTCGGCA
TCGCCCAGATCGGCAAGTCGTTCCGCAACGAGATCACGCCGGGCAACTTC
GTCTTCCGCACCCGCGAATTCGAGCAGATGGAGATGGAGTTCTTCGTGCC
GCCCGACGAGGCGCAGCAGTGGTACGAGTACTGGTGCCAGGCCCGCATGG
ACTGGTACCTCGACCTCGGCATGCCGGCCGACGAGCTGCGCCTGCGGCCC
CACGACGACGACGAACTGAGCCACTACTCGTCGGGCACCTCCGACGTCGA
GTTCCTCTTCCCGTGGGGGTGGGACGAGCTCGAGGGCATCGCCAACCGGG
GCGACTTCGACCTCACCCAACACGCCAACGCGTCGGGCGAGAAGCTCGAC
TACTTCGACCAGGCGTCGGGCGAGCGCTACACCCCCCACGTGATCGAGCC
GGCGGCGGGTGCCACCCGCACCGCCATGGCGTTCCTCATGGCGGCCTACG
ACGAAGAGACGGTCAACGACGACACCCGCACGGTGCTGCGTCTCGACCAT
CGTCTCGCCCCCTACAAGGTGGCCGTGCTGCCGTTGAGCAAGAAGGAGAC
CCTCACCCCGACCGCCCATGAGGTGTTCGACATGGTGAAGGGTCGCTGGA
TGGCCGACTACGACGAGACCCAGTCGATCGGCAAGCGCTATGCCCGCCAG
GACGAGATCGGCACGCCCTACTGCGTCACCGTCGACTTCGACACGCTCGA
CGACAAGGCCGTCACC
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