mRNA_M-pyrifera_M_contig85583.19948.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85583.19948.1
Unique NamemRNA_M-pyrifera_M_contig85583.19948.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig85583.19948.1 vs. uniprot
Match: D7FLI0_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 2.860e-24
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 1 
Query:    1 GIGRALLRRCIWLSRQEASIGAVYLHVITTNPPAHRFYESEGFVQVCCIT 150
            GIGRALLRRC+WLSRQE SIGAVYLHVITTNP AHRFYESEGFVQVCCI+
Sbjct:  216 GIGRALLRRCVWLSRQEKSIGAVYLHVITTNPAAHRFYESEGFVQVCCIS 265
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BLAST of mRNA_M-pyrifera_M_contig85583.19948.1 vs. uniprot
Match: A0A6H5KX22_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX22_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 4.620e-24
Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = 1 
Query:    1 GIGRALLRRCIWLSRQEASIGAVYLHVITTNPPAHRFYESEGFVQVCCI 147
            GIGRALLRRC+WLSRQE SIGAVYLHVITTNP AHRFYESEGFVQVCCI
Sbjct:  270 GIGRALLRRCVWLSRQEKSIGAVYLHVITTNPAAHRFYESEGFVQVCCI 318
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BLAST of mRNA_M-pyrifera_M_contig85583.19948.1 vs. uniprot
Match: B5Y5M1_PHATC (Histone acetyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5M1_PHATC)

HSP 1 Score: 49.3 bits (116), Expect = 1.170e-5
Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 1 
Query:    1 GIGRALLRRCIWLSRQEASIGAVYLHVITTNPPAHRFYESEGFVQV 138
            G+G  +++RCI    +    G +YLHVIT N PA RFYE  GF +V
Sbjct:  117 GLGTTMIQRCIEEVERHPECGVLYLHVITFNEPAIRFYEKLGFYRV 162
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BLAST of mRNA_M-pyrifera_M_contig85583.19948.1 vs. uniprot
Match: A0A7S2UNP0_9STRA (Histone acetyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNP0_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.520e-5
Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 1 
Query:    1 GIGRALLRRCIWLSRQEASIGAVYLHVITTNPPAHRFYESEGFVQV 138
            G+  +L++RCI    Q+   G +YLHVIT N  A RFYE  GF  V
Sbjct:  236 GLATSLMKRCIEKIEQDPECGVIYLHVITYNKAAIRFYEKLGFYMV 281
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BLAST of mRNA_M-pyrifera_M_contig85583.19948.1 vs. uniprot
Match: A0A7S2UNP6_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNP6_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.540e-5
Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 1 
Query:    1 GIGRALLRRCIWLSRQEASIGAVYLHVITTNPPAHRFYESEGFVQV 138
            G+  +L++RCI    Q+   G +YLHVIT N  A RFYE  GF  V
Sbjct:  236 GLATSLMKRCIEKIEQDPECGVIYLHVITYNKAAIRFYEKLGFYMV 281
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BLAST of mRNA_M-pyrifera_M_contig85583.19948.1 vs. uniprot
Match: A0A7S2SR30_9STRA (Histone acetyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR30_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 9.130e-5
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 1 
Query:    1 GIGRALLRRCIWLSRQEASIGAVYLHVITTNPPAHRFYESEGFVQV 138
            G+ ++LL +C+  ++      AVYLHVIT N  A RFYE  GFV++
Sbjct:  190 GVAQSLLAQCVERAKATPGCDAVYLHVITYNTAAIRFYEKNGFVRL 235
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85583.19948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FLI0_ECTSI2.860e-2492.00Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KX22_9PHAE4.620e-2493.88Histone acetyltransferase n=1 Tax=Ectocarpus sp. C... [more]
B5Y5M1_PHATC1.170e-547.83Histone acetyltransferase (Fragment) n=1 Tax=Phaeo... [more]
A0A7S2UNP0_9STRA3.520e-547.83Histone acetyltransferase n=1 Tax=Attheya septentr... [more]
A0A7S2UNP6_9STRA3.540e-547.83Histone acetyltransferase (Fragment) n=1 Tax=Atthe... [more]
A0A7S2SR30_9STRA9.130e-545.65Histone acetyltransferase n=1 Tax=Rhizochromulina ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85583contigM-pyrifera_M_contig85583:316..465 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.4
Seed ortholog evalue1.6e-20
Seed eggNOG ortholog2880.D7FLI0
Preferred nameNAA60
KEGG koko:K21121
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000139,GO:0003674,GO:0003824,GO:0004402,GO:0004596,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0007059,GO:0008080,GO:0008150,GO:0008152,GO:0008283,GO:0009987,GO:0010467,GO:0010485,GO:0012505,GO:0016020,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017196,GO:0018193,GO:0018205,GO:0018206,GO:0018393,GO:0018394,GO:0019538,GO:0022607,GO:0031090,GO:0031365,GO:0031497,GO:0031984,GO:0034212,GO:0034622,GO:0034728,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0043933,GO:0043967,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046983,GO:0051276,GO:0051604,GO:0061733,GO:0065003,GO:0065004,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0098588,GO:0098791,GO:1901564
EggNOG free text desc.peptide alpha-N-acetyltransferase activity
EggNOG OGsCOG0456@1,KOG3138@2759
EC2.3.1.259
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons1
Model size150
Cds size150
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816765.1930761-CDS-M-pyrifera_M_contig85583:315..4651622816765.1930761-CDS-M-pyrifera_M_contig85583:315..465Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85583 316..465 -
1692278165.0759113-CDS-M-pyrifera_M_contig85583:315..4651692278165.0759113-CDS-M-pyrifera_M_contig85583:315..465Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85583 316..465 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85583.19948.1prot_M-pyrifera_M_contig85583.19948.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85583 316..465 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85583.19948.1

>prot_M-pyrifera_M_contig85583.19948.1 ID=prot_M-pyrifera_M_contig85583.19948.1|Name=mRNA_M-pyrifera_M_contig85583.19948.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=50bp
GIGRALLRRCIWLSRQEASIGAVYLHVITTNPPAHRFYESEGFVQVCCIT
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mRNA from alignment at M-pyrifera_M_contig85583:316..465-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85583.19948.1 ID=mRNA_M-pyrifera_M_contig85583.19948.1|Name=mRNA_M-pyrifera_M_contig85583.19948.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=150bp|location=Sequence derived from alignment at M-pyrifera_M_contig85583:316..465- (Macrocystis pyrifera P11B4 male)
GGGATAGGGCGTGCCCTATTGCGCAGATGCATCTGGCTTTCGAGACAGGA
GGCGTCCATTGGGGCCGTCTACCTCCACGTCATCACCACCAACCCTCCGG
CCCACCGGTTCTACGAGTCCGAGGGCTTCGTCCAAGTGTGCTGTATCACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85583:316..465-

>mRNA_M-pyrifera_M_contig85583.19948.1 ID=mRNA_M-pyrifera_M_contig85583.19948.1|Name=mRNA_M-pyrifera_M_contig85583.19948.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig85583:316..465- (Macrocystis pyrifera P11B4 male)
GGGATAGGGCGTGCCCTATTGCGCAGATGCATCTGGCTTTCGAGACAGGA
GGCGTCCATTGGGGCCGTCTACCTCCACGTCATCACCACCAACCCTCCGG
CCCACCGGTTCTACGAGTCCGAGGGCTTCGTCCAAGTGTGCTGTATCACC
GGGATAGGGCGTGCCCTATTGCGCAGATGCATCTGGCTTTCGAGACAGGA
GGCGTCCATTGGGGCCGTCTACCTCCACGTCATCACCACCAACCCTCCGG
CCCACCGGTTCTACGAGTCCGAGGGCTTCGTCCAAGTGTGCTGTATCACC
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