mRNA_M-pyrifera_M_contig8551.19936.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8551.19936.1 vs. uniprot
Match: D7G262_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G262_ECTSI) HSP 1 Score: 305 bits (781), Expect = 3.540e-99 Identity = 156/225 (69.33%), Postives = 182/225 (80.89%), Query Frame = 1 Query: 1 VRAECDDLLN-LPLPLSGDTTLELSSAAIDCTILDDNELQEFIIEGGTLTLSGPSTTKFTNMRFTVMDGAGLIFDFAMTEFGPNLGFERQDDFGGFMVQVMPGGSVEFTGELAATGLENMRSVFWNGVGGSIEFASNVVFNDCDSNVFRDNFGRLRFRSDVTFTDNRYLSISNDGGTVRIDGDALFVTNGGGFDGHSGGAFSNTNGGTAIFRGSAVFSDNSCDES 672 VRA CDDL L PL+GDTTLELS A DC IL+DNEL+EF +EGGTLTL+GPSTTKFTN++FT+MD AGLIFD+ TEFGPNLG+E++D FGG+MVQV+ GGSVEF GE+AATGL NMRSVF+N GG+IEFA N VF+D +NVFR N GRLRF D TFT+N YL+I N+GG+VRI V NG FDGHSGG FSNT+GGTAIFRG A+FS N+CDES Sbjct: 18 VRASCDDLRTALSSPLTGDTTLELSGDA-DCPILEDNELEEFTVEGGTLTLTGPSTTKFTNLKFTIMDQAGLIFDYDTTEFGPNLGYEQEDSFGGYMVQVLSGGSVEFLGEMAATGLANMRSVFYNEAGGNIEFADNAVFDDIGTNVFRSNLGRLRFYGDATFTNNIYLAIDNEGGSVRIXXXXXXVENGRSFDGHSGGGFSNTDGGTAIFRGPALFSSNACDES 241
BLAST of mRNA_M-pyrifera_M_contig8551.19936.1 vs. uniprot
Match: A0A6H5JB77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB77_9PHAE) HSP 1 Score: 140 bits (352), Expect = 7.310e-36 Identity = 78/128 (60.94%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 286 MVQVMPGGSVEFTGELAATGLENMRSVFWNGVGGSIEFASNVVFNDCDSNVFRDNFGRLRFRSDVTFTDNRYLSISNDGGTVRIDGDALFVTNGGGFDGHSGGAFSNTNGGTAIFRGSAVFSDNSCDE 669 MVQV+ GGSVEF GE+AATGL NMRSVF+N GGSIE LRF D TFT+N YL+I NDGG+VRI+G+A FV NG FDGHSGG FSNT+GG AIFRG A+FS N+CDE Sbjct: 1 MVQVLTGGSVEFLGEMAATGLANMRSVFYNEAGGSIE---------------------LRFYGDATFTNNIYLAIDNDGGSVRINGEATFVENGRSFDGHSGGGFSNTDGGIAIFRGPALFSSNTCDE 107
BLAST of mRNA_M-pyrifera_M_contig8551.19936.1 vs. uniprot
Match: A0A6H5J6U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6U2_9PHAE) HSP 1 Score: 125 bits (315), Expect = 1.780e-32 Identity = 63/88 (71.59%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 4 RAECDDLLN-LPLPLSGDTTLELSSAAIDCTILDDNELQEFIIEGGTLTLSGPSTTKFTNMRFTVMDGAGLIFDFAMTEFGPNLGFER 264 RA CDDL + L PL+GDTTLELS A DC IL+DNEL+EF +EGGTLTL+GPSTTKFTN++FT+MD AGLIFD+ TEFGPNLG+ R Sbjct: 5 RASCDDLRSALSSPLTGDTTLELSGDA-DCPILEDNELEEFTVEGGTLTLTGPSTTKFTNLKFTIMDQAGLIFDYDTTEFGPNLGYVR 91
BLAST of mRNA_M-pyrifera_M_contig8551.19936.1 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI) HSP 1 Score: 121 bits (303), Expect = 8.430e-28 Identity = 94/226 (41.59%), Postives = 120/226 (53.10%), Query Frame = 1 Query: 10 ECDDLLNLPLPLSGDTTLELSSAA-IDCTILDD-NELQEFIIEGG-TLTL-SGPSTTKFTNMRFTVMDGAGLIFDFAMTEFGPNLGFERQDDFGGFMVQVMPGGSVEFTGELAATGLENMRSVFWNGVGGSIEFASNVVFNDCDSNVFRDNFGRLRFRSDVTFTDNRYLSISNDG--GTVRIDGDALFVTNGGGFDGHSGGAFSNTNGGTAIFRGSAVFSDNSCDE 669 ECDD+ +S T ++L + +DC DD EL IE G TLT+ S S +F N+RF V +GA LIFD +T GPN G + + G F+ V GGS+ F G+ A+ + N+RSVF+N GSIEF + +FN+ + NVFR N NDG VR A F+ N G FDG G A N GGTAIFR AVFSD+ CDE Sbjct: 25 ECDDIDAYFGDVSSVTEIDLGTIIRVDCPSNDDAEELPYITIESGKTLTVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSG--QSEGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNR--GSIEFKDDSLFNN-NGNVFRSNXXXXXXXXXXXXXXXXXXXXXNDGEDSFVRFSKTATFIDNAGFFDGAWGCAIDN--GGTAIFRDDAVFSDHDCDE 243 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8551.19936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8551.19936.1 >prot_M-pyrifera_M_contig8551.19936.1 ID=prot_M-pyrifera_M_contig8551.19936.1|Name=mRNA_M-pyrifera_M_contig8551.19936.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=321bp VRAECDDLLNLPLPLSGDTTLELSSAAIDCTILDDNELQEFIIEGGTLTLback to top mRNA from alignment at M-pyrifera_M_contig8551:2026..10499- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8551.19936.1 ID=mRNA_M-pyrifera_M_contig8551.19936.1|Name=mRNA_M-pyrifera_M_contig8551.19936.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8474bp|location=Sequence derived from alignment at M-pyrifera_M_contig8551:2026..10499- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8551:2026..10499- >mRNA_M-pyrifera_M_contig8551.19936.1 ID=mRNA_M-pyrifera_M_contig8551.19936.1|Name=mRNA_M-pyrifera_M_contig8551.19936.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1926bp|location=Sequence derived from alignment at M-pyrifera_M_contig8551:2026..10499- (Macrocystis pyrifera P11B4 male)back to top |