mRNA_M-pyrifera_M_contig8545.19923.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: D8LKE0_ECTSI (Thioredoxin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE0_ECTSI) HSP 1 Score: 270 bits (691), Expect = 3.480e-87 Identity = 139/187 (74.33%), Postives = 153/187 (81.82%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRP-STNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAESQ 558 +V+VVGGGDSAMEEALFLTKFASKVT++HRR+GFRSS+IMLERV+ +PKI +KLHR VK+WVSEGG LSGAEL DPRG E LPCSGAFLAIGHKPMTKFL S++ VELDEDGFVVHK+HTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAE + Sbjct: 214 EVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSRIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQD----AVELLPCSGAFLAIGHKPMTKFLHSISSSXXXXXXXXXXXXXXSVVELDEDGFVVHKQHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAEEE 396
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A7C7ZC26_9ARCH (Thioredoxin-disulfide reductase n=5 Tax=root TaxID=1 RepID=A0A7C7ZC26_9ARCH) HSP 1 Score: 223 bits (567), Expect = 1.270e-69 Identity = 116/184 (63.04%), Postives = 138/184 (75.00%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAE 552 +V+VVGGGDSAMEEA FLT+FASKVT+IHRREGFR+SK+M ER SHPKID+ HR +KRW+S+ LSGA L DPR DG+ E + C+GAF+AIGHKPMT FL DG EVE+DE G+++H EHTMTS GVFA GDVVD+RYRQAI+AAGMGCQAA+D E+WL E Sbjct: 147 EVIVVGGGDSAMEEATFLTRFASKVTIIHRREGFRASKVMYERAVSHPKIDIMTHRHIKRWLSDENGLSGAILEDPR----DGSEQE-IACTGAFIAIGHKPMTGFL-----DG-------------EVEMDESGYILHSEHTMTSTPGVFAAGDVVDKRYRQAITAAGMGCQAAMDVEKWLEE 307
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A367I9L2_9ARCH (Thioredoxin-disulfide reductase n=13 Tax=Archaea TaxID=2157 RepID=A0A367I9L2_9ARCH) HSP 1 Score: 219 bits (558), Expect = 3.090e-68 Identity = 109/185 (58.92%), Postives = 140/185 (75.68%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAES 555 +++V+GGGDSAMEEA FLT+FASKVTLIHRR+ FR+SK+MLER ++HPKI+++ R VK+W+S+ LSGA L DPR DG+T E + C+GAF+AIGHKP+T FL ++E D+ G+++HK+HTMTSV GVFA GDVVD RYRQAI+AAGMGCQAAIDCE+WL E+ Sbjct: 148 EIIVIGGGDSAMEEATFLTRFASKVTLIHRRDVFRASKVMLERAENHPKIEIRTFRQVKKWLSDEKGLSGAILEDPR----DGSTEE-IACTGAFIAIGHKPITGFLEG------------------QIETDDSGYIIHKDHTMTSVSGVFAAGDVVDTRYRQAITAAGMGCQAAIDCEKWLEEN 309
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A7C7YNN9_9ARCH (Thioredoxin-disulfide reductase n=2 Tax=Archaea TaxID=2157 RepID=A0A7C7YNN9_9ARCH) HSP 1 Score: 218 bits (555), Expect = 8.530e-68 Identity = 114/185 (61.62%), Postives = 140/185 (75.68%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAES 555 +V+V+GGGDSAMEEA FLT+FA+KVT+IHRRE FR+SK+MLER ++HPKI+MK+HR VK W+S+ L+GA L DPR DG+T E + +GAF+AIGHKP+TKFL DG +VE DE G++V KEHTMTSV GVFA GDVVD RYRQAI+AAGMGCQAAID E WL ++ Sbjct: 146 EVLVIGGGDSAMEEATFLTRFATKVTIIHRREEFRASKVMLERAKAHPKIEMKMHRQVKTWLSDDNGLTGAILEDPR----DGSTEE-IAVTGAFIAIGHKPITKFL-----DG-------------QVETDESGYIVAKEHTMTSVPGVFAAGDVVDTRYRQAITAAGMGCQAAIDVEHWLEDN 307
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A2E6UVA1_9EURY (Thioredoxin-disulfide reductase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6UVA1_9EURY) HSP 1 Score: 217 bits (552), Expect = 2.350e-67 Identity = 113/182 (62.09%), Postives = 137/182 (75.27%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWL 546 +V+VVGGGDSAMEEA FLT+FASKVT+IHRREGFR+SK+M ER SHPKI+ + HR+VKRW+S+ LSGA L D R DG+ + + C+GAF+AIGHKPMT FL DG EVE+D+ G+ +H EHTMTSV GVFA GDVVD+RYRQAI+AAGMGCQAA+D E+WL Sbjct: 147 EVIVVGGGDSAMEEATFLTRFASKVTIIHRREGFRASKVMYERAASHPKIEXRTHRSVKRWLSDENGLSGAVLEDTR----DGSEDK-IACTGAFIAIGHKPMTGFL-----DG-------------EVEMDDSGYXLHSEHTMTSVPGVFAAGDVVDKRYRQAITAAGMGCQAAMDAEKWL 305
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A7J4DDR2_9ARCH (Thioredoxin-disulfide reductase n=4 Tax=Archaea TaxID=2157 RepID=A0A7J4DDR2_9ARCH) HSP 1 Score: 216 bits (551), Expect = 3.330e-67 Identity = 112/182 (61.54%), Postives = 134/182 (73.63%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWL 546 +V+VVGGGDSAMEEA FLT+FASKVT+IHRREGFR+SKIM ER HPKID+K HR VK W+S+ L+GA L DPR DG+ E + C+GAF+AIGHKPMT FL EVE+D G+V+H EHTMTSV GVFA GDVVD+RYRQA++AAGMGC+AA+D E+WL Sbjct: 147 EVIVVGGGDSAMEEATFLTRFASKVTIIHRREGFRASKIMYERAAIHPKIDIKTHRRVKSWLSDDNGLTGAVLEDPR----DGSEEE-ISCTGAFVAIGHKPMTGFLEG------------------EVEMDGSGYVLHTEHTMTSVPGVFAAGDVVDKRYRQAVTAAGMGCRAAMDAEKWL 305
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A6V8DS78_9ARCH (Thioredoxin-disulfide reductase n=6 Tax=Archaea TaxID=2157 RepID=A0A6V8DS78_9ARCH) HSP 1 Score: 215 bits (548), Expect = 9.460e-67 Identity = 109/182 (59.89%), Postives = 136/182 (74.73%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWL 546 +V+VVGGGDSAMEEA FLT+FASKVT++HRR+ FR+SK+M ER +HPKI++K HR VK W+S+ L+GA L DPR DG+T E + CSGAF+AIGHKP+TKFL +VE D+ G+++HK +TMTS+EGVFA GDVVD RYRQAI+AAGMGCQAAID E+WL Sbjct: 147 EVIVVGGGDSAMEEATFLTRFASKVTIVHRRDVFRASKVMYERAVNHPKIEIKTHRTVKSWLSDDNGLTGAVLEDPR----DGST-ETMNCSGAFIAIGHKPITKFLEN------------------QVETDDSGYILHKRNTMTSIEGVFAAGDVVDTRYRQAITAAGMGCQAAIDAEKWL 305
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A381SB69_9ZZZZ (Pyr_redox_2 domain-containing protein n=6 Tax=root TaxID=1 RepID=A0A381SB69_9ZZZZ) HSP 1 Score: 214 bits (545), Expect = 2.850e-66 Identity = 109/182 (59.89%), Postives = 135/182 (74.18%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWL 546 +V+VVGGGDSAMEEA FLT+FASKVT+IHRREGFR+SK+M ER +HPKID+K R VK W+S+ L+GA L DPR DG+ E + C+GAF+AIGHKPMT FL EV++D+ G+++H EHTMTSV GVFA GDVVD+RYRQA++AAGMGCQAA+D E+WL Sbjct: 149 EVIVVGGGDSAMEEATFLTRFASKVTIIHRREGFRASKVMYERAANHPKIDIKTFRQVKSWLSDENGLTGAVLEDPR----DGSE-ERVSCTGAFIAIGHKPMTGFLEG------------------EVDMDDSGYILHTEHTMTSVAGVFAAGDVVDKRYRQAVTAAGMGCQAAMDAEKWL 307
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A519DI23_9EURY (Thioredoxin-disulfide reductase (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A519DI23_9EURY) HSP 1 Score: 209 bits (531), Expect = 4.720e-66 Identity = 108/185 (58.38%), Postives = 135/185 (72.97%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAES 555 +V+V+GGGDSAMEEA FLT+FASKVT++HRR+ FR+S+ M +RV +HPKI++ LHR VKRW+S+ LSGA L DPR DG+ E + C+GAF+AIGHKP T FL +V+ DE G++VH EHTMTSV GVFA GDVVD RYRQAI+AAGMGCQAA+D E+WL E+ Sbjct: 10 EVLVIGGGDSAMEEAHFLTRFASKVTVVHRRDYFRASQTMYDRVVNHPKIEIALHRQVKRWLSDDSGLSGAILEDPR----DGSEHE-ISCTGAFIAIGHKPNTPFLEG------------------QVKTDESGYIVHSEHTMTSVPGVFAAGDVVDTRYRQAITAAGMGCQAAMDTEKWLEEN 171
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Match: A0A822X8T3_9ARCH (Thioredoxin-disulfide reductase n=17 Tax=Archaea TaxID=2157 RepID=A0A822X8T3_9ARCH) HSP 1 Score: 212 bits (540), Expect = 1.530e-65 Identity = 111/186 (59.68%), Postives = 141/186 (75.81%), Query Frame = 1 Query: 1 QVMVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMKLHRAVKRWVSEGGILSGAELGDPRGDAGDGATAEFLPCSGAFLAIGHKPMTKFLRPSTNDGSSGGGNSGGPASIEVELDEDGFVVHKEHTMTSVEGVFACGDVVDRRYRQAISAAGMGCQAAIDCERWLAESQ 558 +V+VVGGGDSAMEEA FLT+FA KVT++HRR+ FR+SK+MLER ++HPKI++K HR VK W+S+ L+GA L D R DG+ E + C+GAF+AIGH+P+T+FL GG +VE+D++G+++H EHTMTSV GVFA GDVVD RYRQAI+AAGMGCQAAID ERWL ESQ Sbjct: 147 EVIVVGGGDSAMEEATFLTRFAEKVTIVHRRDVFRASKVMLERAKNHPKIEIKTHRQVKEWLSDDKGLTGAVLEDSR----DGSLEE-IECAGAFIAIGHRPITEFL--------------GG----QVEMDKEGYILHSEHTMTSVPGVFAAGDVVDTRYRQAITAAGMGCQAAIDAERWL-ESQ 308 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8545.19923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8545.19923.1 >prot_M-pyrifera_M_contig8545.19923.1 ID=prot_M-pyrifera_M_contig8545.19923.1|Name=mRNA_M-pyrifera_M_contig8545.19923.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp MVVGGGDSAMEEALFLTKFASKVTLIHRREGFRSSKIMLERVQSHPKIDMback to top mRNA from alignment at M-pyrifera_M_contig8545:313..2037+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8545.19923.1 ID=mRNA_M-pyrifera_M_contig8545.19923.1|Name=mRNA_M-pyrifera_M_contig8545.19923.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1725bp|location=Sequence derived from alignment at M-pyrifera_M_contig8545:313..2037+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8545:313..2037+ >mRNA_M-pyrifera_M_contig8545.19923.1 ID=mRNA_M-pyrifera_M_contig8545.19923.1|Name=mRNA_M-pyrifera_M_contig8545.19923.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig8545:313..2037+ (Macrocystis pyrifera P11B4 male)back to top |