mRNA_M-pyrifera_M_contig85437.19916.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: A0A0G4IN78_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IN78_PLABS) HSP 1 Score: 178 bits (452), Expect = 1.280e-47 Identity = 91/238 (38.24%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 1 PTGPCDAGYYCTGSASTPNQFSSPPGYYSISGSPNALPCRPGTYNNVDRATECEPCPAGRFCSNFTTILPESCTTGHYCPEGSADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAPLPDTSGGPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLGSSTAAPQEGSGVGGPCPTGSFC 714 PTG C AG+YC GSA +P Q S+ PGY++ SG+ + PC PGTY AT C CPA +C F T +P +CT G +CP G + +P X G Y+ + DC CP G +C G+T PTG C AG+ C P + G CPPG+YCP G P N T V DC C A C + G+S P GY+ G+ + P G CP G C Sbjct: 1766 PTGLCQAGFYCPGSAWSPRQQSALPGYFATSGASSPTPCAPGTYQGSANATSCMTCPASFYCPGFGTAVPLNCTAGSWCPAGDSXXQPXXTGRYSSSTTLQRSQDCNPCPPGQYCITNGITRPTGNCTAGYVCYGNATVAQPTVEAFGQQCPPGFYCPSGIAKPIPCPVGTFRSNLL--GTSVHDCQSCPAMMFCNSTGLSSPSGPILGGYWSLAGAMSPNPSPTGPGFGTCPVGHSC 2001
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: UPI0019556B8A (multiple epidermal growth factor-like domains protein 6 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019556B8A) HSP 1 Score: 177 bits (449), Expect = 2.900e-47 Identity = 88/238 (36.97%), Postives = 119/238 (50.00%), Query Frame = 1 Query: 1 PTGPCDAGYYCTGSASTPNQFSSPPGYYSISGSPNALPCRPGTYNNVDRATECEPCPAGRFCSNFTTILPESCTTGHYCPEGSADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAPLPDTSGGPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLGSSTAAPQEGSGVGGPCPTGSFC 714 P+GPC AGYYC+G ++TP Q + G+YS+ G+ A PC GT+ C C +GR C+ C GH+CP GS X TY GA++ C C AG +C+ GLT P G C GF ++ P+ G CP GYYCP GT P +Y + G+ V C LC +G C + G+ +P C PG+YC G+ TA P +G+ G CP +C Sbjct: 50 PSGPCSAGYYCSGGSATPVQHEAEEGHYSLEGAVRAEPCPMGTFQPGRGYNSCIECQSGRLCNRTGLSQQPLCPPGHFCPAGSLIAHXXXXXTYTASSGAEDLQHCGPCDAGQYCHSPGLTAPQGPCEPGFXXTGGSHIATPISSRYGDICPMGYYCPAGTRHPHEYPCPPGTWSNALGSQSVSSCWLCPSGFFCNSSGLIQPTGICAPGFYCAGGAKTAMPDDGA-TGNRCPARYYC 286
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: A0A401RYP6_CHIPU (Uncharacterized protein n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401RYP6_CHIPU) HSP 1 Score: 159 bits (402), Expect = 6.330e-41 Identity = 92/256 (35.94%), Postives = 125/256 (48.83%), Query Frame = 1 Query: 10 PCDAGYYCTGSASTPNQFSSPPG------YYSI-SGSPNALPCRPGTY---NNVDRATECEPCPAGRFCSNFTTILPESCTTGHYCPEGSADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAPLPDT------------SGGPCPP----GYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLGSSTAAPQEGSGVGGPCP 699 PC AG YC + P S P G Y + +G+P+ PC+PG Y + +R C CP G +C +F P+ C G YC GS P+PC GTY+ + + +DCI C G +C LT+PTG C AGFYC APL + +G PP G+YCP G++ P +GA ++ C LC G +C +G++ P C+PGYYCT GS+T+ P E S G CP Sbjct: 332 PCPAGKYCYSEGTKPVAISQPTGDCPGGHYCPLGTGNPHTFPCKPGFYLSHSAAEREESCSQCPPGYYCESFGLENPKVCPKGFYCILGSKQPQPCQRGTYSDKMSLRALSDCIPCGGGQYCAGESLTQPTGNCKAGFYCRERAVTAAPLQSSCSTCLRGRYCNQTGLVSPPFCIQGHYCPTGSILPIPCPVGYYLHQ--KGAEDITSCKLCDLGMYCSVVGLAAPEGPCQPGYYCTSGSNTSVPVELS-FGDVCP 584
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: UPI001CFA27B7 (neurogenic locus notch homolog protein 1-like n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA27B7) HSP 1 Score: 159 bits (401), Expect = 7.740e-41 Identity = 90/248 (36.29%), Postives = 115/248 (46.37%), Query Frame = 1 Query: 4 TGPCDAGYYCTGSASTPNQFSSPPGYYSISGSPNALPCRPGTYNNV---DRATECEPCPAGRFCSNFTTILPESCTTGHYCPEGSADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAPLPDTSGGPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLGSSTAAPQE---------GSGVGGPCPTGSF 711 TG C GYYC P G +G P + PC G Y N +R C PCP G +C + P+ C G YC EG++ P+PC GTY+ G K++ DCI C +GM+C+ TGLTEP+G C AGFYC + PL G CP G +CP G+ P + G V+ C C G C G P C GY+CT + T A E G+ PCP G+F Sbjct: 812 TGNCPDGYYC------------PEG----TGLPFSYPCGLGNYRNSLKSERGDVCYPCPPGYYCDTLGMVSPKWCPAGFYCVEGASSPQPCEQGTYSNWGGLKSKKDCIPCSSGMYCSSTGLTEPSGFCEAGFYCSERASSATPLDGLGSGICPEGSFCPDGSAIPSP--CPPGTYSNITGLKRVEQCADCPPGAFCTGFGNKVPTGLCEAGYFCTGRADTPAQHETMEGHYSSKGAFQALPCPRGTF 1041
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: UPI0015A7DA4A (multiple epidermal growth factor-like domains protein 6 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A7DA4A) HSP 1 Score: 157 bits (398), Expect = 2.090e-40 Identity = 86/232 (37.07%), Postives = 110/232 (47.41%), Query Frame = 1 Query: 1 PTGPCDAGYYCT--GSASTPNQFSSPPGYYSISGSPNALPCRPGTYNNVDRATECEPCPAGRFCSNF----TTILPESCTTGHYCPEG--SADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAPLPDTSGGPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLGSSTAAPQE 672 P+G C AGYYC ++S P ++ P S PC PGTY + +C PCPAG FC+ T P P G S PC GT++ G C GL+ PTG+C+AG+ C+ P D SGG C G YCPQG++S NP EGA VD CL C G +C +G+ P +C PG+YC+LGSS+A PQE Sbjct: 1051 PSGLCQAGYYCPLGQNSSNPTSYTCSPXXXXXXXSATQSPCAPGTYQDRPGQADCAPCPAGHFCTGSSHPETGHTPSXXXXXXXXPPGAKSGVEFPCPVGTFSDRTGVSRAEQCAXXXXXXXXGSAGLSAPTGQCSAGYLCILGAVVPQPAGDASGGRCSSGTYCPQGSVS--MLPCPPGTYNPLEGAASVDACLPCPRGQYCAGIGLDAPSGSCSPGHYCSLGSSSAEPQE 1280
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: U6MVS5_9EIME (Uncharacterized protein (Fragment) n=1 Tax=Eimeria necatrix TaxID=51315 RepID=U6MVS5_9EIME) HSP 1 Score: 147 bits (370), Expect = 1.580e-38 Identity = 82/226 (36.28%), Postives = 109/226 (48.23%), Query Frame = 1 Query: 7 GPCDAGYYCTGSASTPNQFS--SPPGYYSISGSPNALPCRPGTYNNVDRATECEPCPAGRFCSNFTTIL--------PESCTTGHYCPEGSADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAP--LPDTSGGPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLG 648 GPC AGYYC +S+ S +PPG ++ GSP C PGT+ D A EC CPAG +C L P+ C G YCPEGS + C GT+N + DC+ CPAG +C PTG+C+ G++C S + ++AP + GPCP G+YCP+GT SP G +C G+++P C PGYYC G Sbjct: 115 GPCAAGYYCPEGSSSKGDSSLRAPPGSFAPEGSPLPQFCWPGTFTEGDAAAECLLCPAGFYCDEAGMSLTPVSGAAAPKGCRVGMYCPEGSVFHKNCPPGTFNALQNGETVGDCLLCPAGFYCQYEETNGPTGKCSKGYHCASRSTSMAPQEIDSFGNGPCPAGFYCPEGTESP--------------------------VGLYCEYEGLTKPSAECSPGYYCEEG 314
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: UPI0018F32182 (multiple epidermal growth factor-like domains protein 11 n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F32182) HSP 1 Score: 152 bits (383), Expect = 1.720e-38 Identity = 91/259 (35.14%), Postives = 124/259 (47.88%), Query Frame = 1 Query: 1 PTGPCDAGYYCTGSASTPNQFSSPPGYYSIS---------GSPNALPCRPGTYNNVDRATECEPCPAGRFCSNFTT----------ILPESCTTGHYCPEG--SADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAPLPDTSGGPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLGSSTAAPQEGSGVGGPCPTGSFC 714 P+ CDAG+YC P Q SS P + + G P PC PGT+ + C CPAG FC +FT+ + P C G+YCPEG SA PC GT++ G TDC++CP G +C+ LTEPTG+C G+YC+ + + P + +G CP G YCP+G+ + P +G+ DC C G C G++ P C GYYC +G + A + G CP G FC Sbjct: 161 PSQSCDAGFYCP-----PGQNSSRPTSFICTRXXXXXXXXGKPR--PCPPGTFQDQVGQASCIQCPAGYFC-HFTSDVDSDLSHGVLTPLPCPRGYYCPEGTMSASHFPCPIGTFSNRTGIGTVTDCLSCPPGKYCDKRSLTEPTGDCWEGYYCIQNSSSPNPTDEVTGRKCPRGLYCPRGSKN--MLSCPVGHFGPVQGSGSEIDCPPCPPGLFCNTSGLAFPAGKCSAGYYC-MGKARRATPTDNVTGNRCPIGHFC 408
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: UPI00109BA52F (uncharacterized protein LOC110234175 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA52F) HSP 1 Score: 151 bits (382), Expect = 3.040e-38 Identity = 90/256 (35.16%), Postives = 117/256 (45.70%), Query Frame = 1 Query: 1 PTGPCDAGYYCTGSASTPNQFSS------PPGYYSISGSPNALPCRPGTYNNVDRATECEPCPAGRFC--SNFTTILPESCTTGHYCPEGSADPEP-CXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTE----PTGECNAGFYCVSANYAVAPLPDTSG--GPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEV---DDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLGSSTAAPQEGSGVGGPCPTGSFC 714 PTG C G+YC G +STP P G+ GS LPC GTY+NV EC CP +C P C GHYCP+ + P C GTYN G E C G+ +G+C+AGFYC S P + +G G CPPG YCP+GT+ P F +++ +C LCT+G++C ++ P C G+YC GS+T P S +GGPC G FC Sbjct: 1712 PTGNCSGGFYCKGGSSTPQPTDGTKGDICPKGFRXXEGSSTYLPCVDGTYSNVTGLAECLDCPERYYCLGGELHGKTPIPCKPGHYCPKRTGFSLPTCPPGTYNPQTGLAKEDQCWPXXXXXXXAGRGIDSFPSLQSGDCDAGFYCQSGINTPRPSSNYTGIGGVCPPGAYCPKGTIEP-----IGCPNGTFSNVSQLKAASECTLCTSGYYCQESNLTSPTGKCDAGFYCLSGSNTPKPTTESNIGGPCKIGHFC 1962
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: UPI001B7E219B (SCO-spondin n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E219B) HSP 1 Score: 147 bits (371), Expect = 9.010e-37 Identity = 87/229 (37.99%), Postives = 113/229 (49.34%), Query Frame = 1 Query: 10 PCDAGYYCTGSA---STPNQFSSPPGYYSISGS--PNALPCRPGTYNNVD---RATECEPCPAGRFCSNFTTILPESCTTGHYCPEGSADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAPLPDTSGGPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPG--PTCRPGYYCTLGSSTAAP 666 PC AG YC + S P S P GY+ G+ P + PC PG+Y N R C+PCPAG +C++ T +P C G++C EGS+ PEPC GTY+ + ++C C G +C GLTEPTG C AGFYC + P +GG CP G YCP G+ P L C G G+S PG C PGY+C+ GS+ +AP Sbjct: 232 PCPAGQYCFSKSQGISRPTG-SCPSGYHCPVGTGYPYSFPCTPGSYRNSSLGHRGETCQPCPAGFYCASQATEIPTICPRGYFCVEGSSSPEPCEEGTYSARPALRAGSECAPCVGGWYCAGVGLTEPTGSCEAGFYCRERARSATPADGHTGGLCPIGSYCPAGSAFP----------------------LPCPPGTFSNATGLSRPGLCVDCTPGYHCS-GSNVSAP 436
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Match: A0A6P4Z2E1_BRABE (LOW QUALITY PROTEIN: uncharacterized protein LOC109474799 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z2E1_BRABE) HSP 1 Score: 147 bits (371), Expect = 9.090e-37 Identity = 88/258 (34.11%), Postives = 118/258 (45.74%), Query Frame = 1 Query: 1 PTGPCDAGYYCTGSA--STPNQFSSPPGYYSISGSPNALPCRPGTYNNVDRATECEPCPAGRFC---------------SNFTTILPESCTTGHYCPEG--SADPEPCXAGTYNGDIGAKNETDCIACPAGMHCNDTGLTEPTGECNAGFYCVSANYAVAPLP-DTSGGPCPPGYYCPQGTMSPRQYXXXXXXXNPFEGATEVDDCLLCTAGHHCPNLGMSEPGPTCRPGYYCTLGSSTAAPQEGSGVGGPCPTGSFC 714 P G CDAG++C S+ P PG+ GS + PC G Y C CPAG++C S + P+ C G YCP G SA PC TY+ G +++ +C ACP G +C +T+PTG C AGFYCV A P P D +GGPCP G YC +G+ P X + + +C C G C G++ P +C G+YCTL + P + G CP G +C Sbjct: 523 PAGQCDAGWFCPESSIDRQPEGNRCLPGHQCPQGSGSQDPCPSGMYQPDAGGGRCLLCPAGKYCDRDEAIAEQQSGVNSSTHGVVTPKECPAGFYCPNGTESARQFPCPVSTYSNTTGLESQEECRACPEGFYCEAQNITQPTGTCAAGFYCVLAAVTPTPEPADATGGPCPQGTYCDEGSSWPTXXXKGTYGHR--DKLPSLSNCTDCPPGDFCMQTGLTAPNGSCLAGHYCTLKAINPNPVNET-YGDICPAGHYC 777 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85437.19916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85437.19916.1 >prot_M-pyrifera_M_contig85437.19916.1 ID=prot_M-pyrifera_M_contig85437.19916.1|Name=mRNA_M-pyrifera_M_contig85437.19916.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp PTGPCDAGYYCTGSASTPNQFSSPPGYYSISGSPNALPCRPGTYNNVDRAback to top mRNA from alignment at M-pyrifera_M_contig85437:3..860- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85437.19916.1 ID=mRNA_M-pyrifera_M_contig85437.19916.1|Name=mRNA_M-pyrifera_M_contig85437.19916.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig85437:3..860- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85437:3..860- >mRNA_M-pyrifera_M_contig85437.19916.1 ID=mRNA_M-pyrifera_M_contig85437.19916.1|Name=mRNA_M-pyrifera_M_contig85437.19916.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig85437:3..860- (Macrocystis pyrifera P11B4 male)back to top |