mRNA_M-pyrifera_M_contig8540.19908.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8540.19908.1
Unique NamemRNA_M-pyrifera_M_contig8540.19908.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: A0A6H5L740_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L740_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 1.460e-91
Identity = 132/164 (80.49%), Postives = 144/164 (87.80%), Query Frame = 1 
Query:    1 KTTNINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLPASCNHPCVSAVGSCCGP 492
            K  NINM+AAVLHA TDL+QS GVL+AGLLIWY+PRWKWADPIATLFFV LV+ STR LL+RAFNVLLEGVPDSI+YD+LR RL  IEGVTDLHCLHVWSLTLGRTVVSAHIKATDPE+ L SAH ICE MGV HSTIQVQ D+C+ + C HPCVSAVG CCGP
Sbjct:   54 KEKNINMEAAVLHAVTDLVQSAGVLLAGLLIWYDPRWKWADPIATLFFVGLVLNSTRWLLKRAFNVLLEGVPDSIDYDQLRHRLLSIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPEKALVSAHGICEAMGVVHSTIQVQVDHCVDSRCKHPCVSAVGGCCGP 217
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: D7FQH9_ECTSI (Cation efflux family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH9_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 3.140e-87
Identity = 132/164 (80.49%), Postives = 144/164 (87.80%), Query Frame = 1 
Query:    1 KTTNINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLPASCNHPCVSAVGSCCGP 492
            K  NINM+AAVLHA TDL+QS GVL+AGLLIWY+ RWKWADPIATLFFV LV+ STR LL+RAFNVLLEGVPDSI+YD+LR RLS IEGVTDLHCLHVWSLTLGRTVVSAHIKATDPE+ L SAH ICE MGV HSTIQVQ D+C+ + C HPCVSAVG CCGP
Sbjct:  338 KEKNINMEAAVLHAVTDLVQSAGVLLAGLLIWYDLRWKWADPIATLFFVGLVLNSTRWLLKRAFNVLLEGVPDSIDYDQLRRRLSSIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPEKALVSAHGICEAMGVVHSTIQVQVDHCVDSRCKHPCVSAVGGCCGP 501
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: A0A836CJ41_9STRA (Cation efflux protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ41_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.720e-67
Identity = 100/162 (61.73%), Postives = 126/162 (77.78%), Query Frame = 1 
Query:    1 KTTNINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLPASCNHPCVSAVGSCC 486
            K  N+N++AA LHA +DL+QSVGVL AGL+IWY P W+ ADP+ TL FV LV+ STR LL  A N+LLEGVP++ +   L+  L  IEGVTD+HCLH+WSLTLGRTVV+AH+KA DP+  LA+AH + E  GV HSTIQVQ+D CL ++C+HPCVS+V  CC
Sbjct:  228 KARNLNVEAAALHAISDLLQSVGVLGAGLIIWYKPEWRLADPLCTLVFVVLVINSTRSLLGHALNILLEGVPEAFDLPVLKSELMGIEGVTDVHCLHIWSLTLGRTVVTAHMKAVDPDMALAAAHALLEKKGVVHSTIQVQRDGCLQSACSHPCVSSVSQCC 389
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: A0A7S3Y7Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7Z6_HETAK)

HSP 1 Score: 177 bits (450), Expect = 9.630e-54
Identity = 81/166 (48.80%), Postives = 115/166 (69.28%), Query Frame = 1 
Query:    1 KTTNINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLPASCNHPCVSAVG----SCC 486
            K  N+N+ AA LHA TDL+Q++GV++AG++IW  P W+ ADP+ T+ F  LVV ST  +++    VLLE VP  ++Y+ +R  L  +EGVTD+H LH+WSLT+GR   +AH+KA DP+R L  AH     +G++H T+Q+Q D+CLP  C+HPC SA G    +CC
Sbjct:    8 KPRNVNVAAAYLHAITDLLQNLGVILAGVVIWCKPDWQIADPLCTVLFAVLVVVSTVAMIRGTVLVLLEAVPYGVDYEEVRRALEGVEGVTDVHDLHIWSLTVGRNAATAHMKARDPKRALGEAHRAASRLGLSHVTLQIQPDDCLPEDCDHPCPSAAGMNDDACC 173
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: A0A7S2UUS8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUS8_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.620e-47
Identity = 82/166 (49.40%), Postives = 118/166 (71.08%), Query Frame = 1 
Query:    1 KTTNINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLP-ASCNHPCVSAVGSCCGPD 495
            K  N+N+ AA+LHA TD IQS+GV++AG++I + P W+  DP+ T+ F  LVV ST +LL++   VL+E VP+S ++  +  R S I GV+D+H LH+WSLTLG T V+AHIKA+DP + L  AH    ++G+ H TIQVQ+D+C P   C+HPC+S+  +CC P+
Sbjct:  253 KGDNLNVKAALLHALTDGIQSLGVILAGVIICFKPHWQVVDPMCTILFACLVVASTIRLLKKTVFVLMEAVPESTDWHSVYDRFSAIRGVSDVHDLHIWSLTLGTTAVTAHIKASDPHQALKDAHVAARELGLQHVTIQVQQDDCGPDEDCDHPCLSS--NCCVPE 416
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: W7TKD0_9STRA (Zinc transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKD0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.330e-44
Identity = 75/156 (48.08%), Postives = 107/156 (68.59%), Query Frame = 1 
Query:    1 KTTNINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLPASCNHPCVS 468
            K+ NIN++AA LH  TDL+QS+GV +AG++I++ P W+  DPI T+ F  L+  S   +L ++ +VLLEGVP+ ++   L  +L  IEGVTD+H LHVW L++GR +V+ HIKA DP+  +  A  +    G+ H TIQ+Q+D CLP  C HPCVS
Sbjct:  409 KSRNINLEAAHLHVITDLVQSLGVALAGVIIYFKPHWQVVDPICTIVFSILICYSVVSMLAKSTHVLLEGVPEGVDPHALHDKLLAIEGVTDVHDLHVWMLSVGRPLVTVHIKAADPDMAMHKAQAVFTQAGIDHITIQIQRDECLPNECAHPCVS 564
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: A0A7S2MT96_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MT96_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.340e-38
Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 1 
Query:   10 NINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEG------VTDLHCLHVWSLTLGRTVVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLPASCNHPCVSAVGSCC 486
            N+NMDAA LH   DLIQSVGV+VAGL+IW+ P W+  DP+ T  F  +V+ +T  +L+   NVLLEGVPD ++ DRLR  L EI+       V ++H LHVW++  G+ ++SAHI A++    L  AH +C+  G+ H+TIQ+   N        PC S V  CC
Sbjct:  224 NVNMDAAYLHVIGDLIQSVGVMVAGLIIWWKPTWQVIDPLCTFVFAGIVMFTTLNMLRSNINVLLEGVPDDVDVDRLRAHLLEIKDDTGASIVMNVHDLHVWNIAPGKPLLSAHIHASNAPVALQKAHYVCQKYGIPHATIQINGPN-------DPCSSKV--CC 379
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: A0A7S1XYV4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYV4_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.190e-37
Identity = 61/147 (41.50%), Postives = 90/147 (61.22%), Query Frame = 1 
Query:   10 NINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLPASC 450
            N++++AA +HA  D+IQS+GV+ AG ++W+ P W+  DP+ T+FF A+VV +T Q+      +LLEG P   +++ LR  L  I G  + HCLHVW L+ G +  S H+ A +PE     A  I  D G+ H+TIQV K+   P  C
Sbjct:   27 NLSLNAAYIHALGDMIQSIGVMAAGAVVWWKPTWQIVDPLCTIFFAAIVVHTTTQVTSSTLRILLEGAPAGFDFEHLRSELEGIPGSRNCHCLHVWVLSPGLSAGSVHLTAENPEEAQERARRIFNDFGIEHTTIQVVKEGGEPPPC 173
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BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: Y3629_DICDI (Probable zinc transporter protein DDB_G0283629 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Y3629_DICDI)

HSP 1 Score: 141 bits (356), Expect = 3.080e-36
Identity = 72/158 (45.57%), Postives = 103/158 (65.19%), Query Frame = 1 
Query:   10 NINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIK---ATDPERVLASAHEIC-EDMGVAHSTIQVQK----DNCLPASCNHP 459
            NIN+ +A +H   D  QS+GV+VA  +IW +P WK ADPI TL F  +V+ +T +LL+ +  VL+EGVP  I+   ++  LSEIEGVT++H LH+WS+TLGR  +S H+      DPE +L+ A++I  ED  + H+TIQ++K    D C   SC  P
Sbjct:  368 NINVHSAYIHVLGDCFQSIGVMVASCIIWVHPHWKIADPITTLIFSVIVLGTTIKLLRESLGVLMEGVPPEIDVSEVKGDLSEIEGVTEVHDLHIWSITLGRPALSVHLTILPTIDPEEILSIANKILLEDYEINHTTIQIEKPLVKDKCKDHSCPPP 525
[Close]
BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Match: F0XWU7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWU7_AURAN)

HSP 1 Score: 135 bits (339), Expect = 2.010e-35
Identity = 66/152 (43.42%), Postives = 97/152 (63.82%), Query Frame = 1 
Query:   10 NINMDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQSTRQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRTVVSAHIKAT----DPERVLASAHEICEDMGVAHSTIQVQKD-NCLPASC 450
            N+N+DAA LH   DL+QS+GV+VAGLLIW +P W+ ADP+ TL F  +V+ +T     +   VLL+G PDS++   L   L+ ++GV D H +HVW LT G+ ++S H+       DP+ VL +A  +C   G+ H+TIQ+Q   +CL  +C
Sbjct:  145 NMNLDAAYLHVLGDLLQSLGVVVAGLLIWAHPDWQIADPVVTLVFAVVVLYTTAGFTIQTVTVLLQGAPDSVDCVALTRALNGLDGVADCHDVHVWELTAGKPILSCHMICAEGTRDPDAVLKAAQALCASHGIDHATIQIQTGGDCLSTTC 296
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8540.19908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L740_9PHAE1.460e-9180.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQH9_ECTSI3.140e-8780.49Cation efflux family protein n=1 Tax=Ectocarpus si... [more]
A0A836CJ41_9STRA3.720e-6761.73Cation efflux protein n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3Y7Z6_HETAK9.630e-5448.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UUS8_9STRA2.620e-4749.40Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TKD0_9STRA1.330e-4448.08Zinc transporter n=2 Tax=Monodopsidaceae TaxID=425... [more]
A0A7S2MT96_9STRA1.340e-3845.45Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1XYV4_9STRA1.190e-3741.50Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
Y3629_DICDI3.080e-3645.57Probable zinc transporter protein DDB_G0283629 n=1... [more]
F0XWU7_AURAN2.010e-3543.42Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8540contigM-pyrifera_M_contig8540:266..6650 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.9
Seed ortholog evalue6.7e-69
Seed eggNOG ortholog2880.D7FQH9
Preferred nameZRC1
KEGG koko:K14688,ko:K14692
KEGG TC2.A.4.2,2.A.4.4.3,2.A.4.4.5
KEGG Pathwayko04978,map04978
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006829,GO:0006873,GO:0006875,GO:0006877,GO:0006882,GO:0006950,GO:0008150,GO:0008324,GO:0009636,GO:0009966,GO:0009967,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010646,GO:0010647,GO:0012505,GO:0015075,GO:0015087,GO:0015318,GO:0016020,GO:0016021,GO:0016323,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022857,GO:0022890,GO:0023051,GO:0023056,GO:0030001,GO:0030003,GO:0031090,GO:0031224,GO:0031984,GO:0032879,GO:0034220,GO:0040026,GO:0040028,GO:0042175,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046578,GO:0046579,GO:0046686,GO:0046873,GO:0046915,GO:0046916,GO:0048518,GO:0048522,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051056,GO:0051057,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051716,GO:0055065,GO:0055068,GO:0055069,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0061062,GO:0061063,GO:0061088,GO:0061687,GO:0065007,GO:0065008,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071276,GO:0071294,GO:0071577,GO:0071585,GO:0071944,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0097237,GO:0097501,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098754,GO:0098771,GO:0098805,GO:0098827,GO:0098849,GO:0098852,GO:1902531,GO:1902533,GO:1990170,GO:1990748,GO:2000026
EggNOG free text desc.regulation of zinc ion transport
EggNOG OGsCOG1230@1,KOG1483@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons5
Model size555
Cds size537
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8540.19908.1prot_M-pyrifera_M_contig8540.19908.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8540 284..6650 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816763.123655-UTR-M-pyrifera_M_contig8540:265..2831622816763.123655-UTR-M-pyrifera_M_contig8540:265..283Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8540 266..283 +
1692278163.935106-UTR-M-pyrifera_M_contig8540:265..2831692278163.935106-UTR-M-pyrifera_M_contig8540:265..283Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8540 266..283 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816763.1367285-CDS-M-pyrifera_M_contig8540:283..3191622816763.1367285-CDS-M-pyrifera_M_contig8540:283..319Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 284..319 +
1692278163.9465303-CDS-M-pyrifera_M_contig8540:283..3191692278163.9465303-CDS-M-pyrifera_M_contig8540:283..319Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 284..319 +
1622816763.1528108-CDS-M-pyrifera_M_contig8540:1266..13651622816763.1528108-CDS-M-pyrifera_M_contig8540:1266..1365Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 1267..1365 +
1692278163.955585-CDS-M-pyrifera_M_contig8540:1266..13651692278163.955585-CDS-M-pyrifera_M_contig8540:1266..1365Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 1267..1365 +
1622816763.173248-CDS-M-pyrifera_M_contig8540:3091..32031622816763.173248-CDS-M-pyrifera_M_contig8540:3091..3203Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 3092..3203 +
1692278163.9644177-CDS-M-pyrifera_M_contig8540:3091..32031692278163.9644177-CDS-M-pyrifera_M_contig8540:3091..3203Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 3092..3203 +
1622816763.184409-CDS-M-pyrifera_M_contig8540:5003..51551622816763.184409-CDS-M-pyrifera_M_contig8540:5003..5155Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 5004..5155 +
1692278163.9738877-CDS-M-pyrifera_M_contig8540:5003..51551692278163.9738877-CDS-M-pyrifera_M_contig8540:5003..5155Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 5004..5155 +
1622816763.2010465-CDS-M-pyrifera_M_contig8540:6512..66501622816763.2010465-CDS-M-pyrifera_M_contig8540:6512..6650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 6513..6650 +
1692278163.9832304-CDS-M-pyrifera_M_contig8540:6512..66501692278163.9832304-CDS-M-pyrifera_M_contig8540:6512..6650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8540 6513..6650 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8540.19908.1

>prot_M-pyrifera_M_contig8540.19908.1 ID=prot_M-pyrifera_M_contig8540.19908.1|Name=mRNA_M-pyrifera_M_contig8540.19908.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
MDAAVLHAATDLIQSVGVLVAGLLIWYNPRWKWADPIATLFFVALVVQST
RQLLQRAFNVLLEGVPDSINYDRLRIRLSEIEGVTDLHCLHVWSLTLGRT
VVSAHIKATDPERVLASAHEICEDMGVAHSTIQVQKDNCLPASCNHPCVS
AVGSCCGPDGAILSPRSVAAAAEAAAAAA
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mRNA from alignment at M-pyrifera_M_contig8540:266..6650+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8540.19908.1 ID=mRNA_M-pyrifera_M_contig8540.19908.1|Name=mRNA_M-pyrifera_M_contig8540.19908.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6385bp|location=Sequence derived from alignment at M-pyrifera_M_contig8540:266..6650+ (Macrocystis pyrifera P11B4 male)
AAGACGACAAACATCAACATGGATGCGGCTGTTCTTCATGCGGCAACTGA
CCTGGTACGCTGTTGTTTCTCCTCCTCTTTTTGTTTTTCCCATGTTGTTC
TCCTGGCACGCTGTTGTTTTTCTTCATTTGTTGTGCTGTAGCTGGTTGAG
TCTGTGGTATGCGTTAGCTCTTGTGGCGTTTTTGTTTTTGGTAGGGGTGG
TAACAGCGGTGCTAATGCGTGGTTTACCGCTTCCTTCCAGATCTAAATTC
CGAGTGGGGTTTTGACCGAATTGCTGACCAAGTTCTAAAGAAGGTTACAG
CCGTACTATTAAAAGTACCTATCAGGTATCATTCTGCAAATATCCTCCAA
TGCTGATTCCGAGCGAAGCTCCCCCCGAACTGTAGTGGCAGCTATTAATA
GGTGTACTTGGCTAAGGGTTAATATGACGTGTGTTATGCGCGGGGTGGGG
AGAAGGAGTACACACGTGTGAACTGGACTGGGCAAACGCATGGGTCTATT
GCAGCCCCCCCGTCTTGTATGACCCCCGAATTTTTAGTAAAAGCAATCTG
GTCGGTCGCTAGGAATTGTCGGTCCATCAAGAGGGCGGCACATGTGGAAC
TCGACGGTGTCGCCACCCCTACAGCTGCGCGCAAACTTCGGCCGGGATGC
AAGAAATGTTCTGCCCTAGTGGGAGCAGCGCATGGAAACCTTCTCAATAG
CGTCGTTTCTAATTCTGTTTCAGTCCCGCGAGCTAGTTTACCACCTGACA
CCTGACACCTGACTTCCCCACCACTAGCCCGACCCGCACCACCGGTTCCA
CAATTCTCGACGGTCGAGCATCCCGCTTATCCTCCCACCGTCACCAACCC
ATCATACAATTCGCCGTGCGGAATAATCAATTGCCCCCTCGATACCCCCC
CCTGCTTCCCTGCCTCCCTCCTTCCCCCCCTCCCTTCCTCTCCCCTCCCC
CGTCCGCCCGCTTCCCCGCCCCCCCCCCCATCATCCTGTGTGACGAGACA
GATCCAAAGCGTGGGTGTACTTGTAGCAGGACTGCTTATCTGGTACAATC
CGCGATGGAAGTGGGCTGATCCTATCGCCACTCTTTTTTTCGTCGCTCTG
GTGCGTTGTTTGCCGTGCTGCCTTTCTGTGGGACAATACCGTACCCCCCT
ATTATACATAGGTTGGGTTGGCGTCGGGTGGGAACGACACTGTAAAACAT
GCCGCTCACTACTTGAGCTAGACAACCAGGGTACCGCTTTTTATTTATAT
TTATTTATTTTTGGCGGTCGGTCACAGCTGATGGTCGAGTTAGATCATTT
TGTGCTGAGGTGAAAAACCTTTACTCCGCCCAAGGAGAACGATCGTATCA
CGTATTGTTTATGGTAAGGCACCCAAGAGGAAGTTACATAGTATTCCCAT
TGCTGTCTCTGGAAGTGTCTACATCGAAAATTTAAATAAACTAGTTGAAC
CTGTCATCCATATGCAAGTCCGCCTCACAAACGGTTCTTAGTAAGATGCA
GCTCACCCTTCATGCGACTCGCAGGACACCGCACGGCGCTTCGTGCGTGC
TGCACGCAATCTCTGCTTGGTCGACGAAAACCCGACATGCTCCNNNNNNN
NNNGGGATGCGCGGGTCTACGCCCTCACGTCCACGGCCATGCATGGGCTC
TGGTCCATCTGTCCTATTGAGTCCCGCCCCCTCCCCCCCTCCTCCGTTTA
TTTTTTTCGGCGGTCGGCATGACTGGCGGTCGAGTTAGTTCGTTTGTGCG
GGGTGGATGGCCTTAACTCCGGCAATTTTCGCATCACGTACTTTGTACTG
GTTTATGGTATCGCACCCACGAGGCAGTCGCATCGTATACCCGTTGCCGT
TTCTGGGTTTGACCACACCAGAAATCAAATCGGTTTATTCGACGCTGTCA
ACCGTGTGCAAGAAAATCCCACCTTGCAAGCGGTTCTTGGTCAGATGCAG
CTCACCCTTCGTGCGTCTCGCCGCAACAACCCACGGCGCTTCGCGCTTGG
TGCAAGCAGGGCCTGCCTAGTCAGTGAAAACCCGACGTGCTAAGTCCCGG
CATTGTAGGGGTGCGAGGGTCTATGCTCATACGACTACGGCCATGCATGA
CATGAGTACACCTCTCCCCCGCCTCCCACCCGACTTACTCCGTCCCATCG
TACGAGGCGGTAGTGTCCTGGGTTTGGTTTTTTGTTCGGACGTCGAGGTA
CTGTAGGTGTAGTTGGCGTGGGCTTGTTATGGCATTTGAGCTACGTAGTG
GATGAAAGCTGTGTTGTCTTGCCGGGGTACACACGTACTTGGAGGAAAAA
AAAACGACGCGCCACTTGTTTTTGTCTTTGTTTTTGATTTTCCGAGTCCC
AGACAACGGAGGAATACTAAAACCGGGTAACTATATTTCTAAAAACAACT
GCCGCTTATTAAATTCCCCCAGAAATGTCCGGAAAGGTCACCATTCCAGT
ATATTTCTCATTCTGACCTTCGGAAGGAGTGCTGGTCGTTTTTTGTTTTT
CCCTTTTTTTTGTGTACTCTTGGGCATTGACTTGTTGAGTCGCATCGTTC
ACCATTCCCACTCCTTGGCTGTGCTTTCAAAGGTGTTGATGACATGGGGA
GGAAACGAGCTGACCCCGCGCCGCGTGATTGGCCGCCTGCCATTAAAAAA
ACGCCAAGTAGGCGGTACGGTAAGGTATAGAGGACCGGGGAACTGCCTTC
CCATCCACGCGTTCGGTATAGTGACGTCCGATACCCACGTCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCTCCCTCCTTGCTCATGGCGGGGCGTGCCTGT
GTGGCGCCCGTTGCGCGCCTGAGCAGGTGGTCCAGTCCACCCGGCAACTG
CTGCAGAGGGCGTTCAACGTTCTCCTCGAAGGCGTGCCGGATAGCATCAA
CTACGACCGCCTTCGTATCCGGCTCTCCGAGATCGAAGGTGCGTACGTAT
CGTTTTTCATTATTTTTTTTTTTGGTGGATGGTCGCCCGACGCCTTTTCT
TTGCGTAAACATACCGAAATAGATACCTGGTATATGACGAAAACGAAATC
CTAGTGACAGTGTACGTAGGAGAGTTTTTGTTCAATTCGTTTTGGTTTTT
GGTAATGGTCGCGGACACTCCTCCTTTCTGTCGCAAAAAATGTTTGAAAG
CAAGTACAAACTCAAACGAAAATGGAGAAGCAGAAACTCCCCCTGGTATT
CTTAACGGCGAAGACATATTGAGAGATTTCAATTTCATAGAAACCGTCTA
CGTAAAATTTTGTGACAGCGCGCAGTTACGTTAATATGTGGCATCATGCT
GCGCGCGGGCGTGTAGTTCCTTCGCCGAACGGGTCGTTGCCGGGTATCAT
TCGCAGTCCGGGTTGTATTATTGTCATCGCGCAATCTCTCTACTTAACCC
AGCAGAGCAGTCCAGAAAATTCTCTTTACAGCCGATTGTGCTGAAATCGC
CATTTTTTTTTCGTCATACGTCAATTTTTCGCGTTTCACACGTCGAATTT
CGTCACCTATTTCCGTTTGATGAGTCACAGCTTTCAGGGTAGATACATTG
CTGATCTGTGTGGCCTGCTGTAGCTCATTCTTCCCGGTGGCAGCCGCGTA
TCCTGCGTGATCTAGAGCATGTTTTCTGGATTGGATCTGCACGATGCGTA
GATAGTATTGTAGTAACGGCCAGGTGAGGATCTAATTCGATCTACTGGAG
ATAGATCGTGATCTGCCCTACGCGTGCACTGCCCCCTGGGAAGTCCCGGA
GTTCCGAATAAACCAGCAGGGTATAACGTTGTCGTAACCGTGTACGAGCC
GCTGCTGGTGTTGTCGTGTTTGGATAATTCTTCGACACATGGGGCACAGA
TCGTAGTCTACTTCATCTACAGTTGTAGTTGATACTCTGTTTGCTGCTGT
AATATTAATAGGATGTATTTTTTTTTGGAAAGCCGAGTCATGTAGGTCCT
ACCCGGCAAGTTTGTGCGTAACAACCGTTTTTTTCACGGGGATTTCACCT
GCGCTAAAAACACGATCTTAAGCCGTGCGGATTCGGTTTTCAACAGGGCT
ATATTTACCTGCCCCGAACGATCTAGATCATGAGATCGCGAGATGGCAGG
TCTGATCTCATCTACATCGTCTCCTTAAAAGCAATGAATAATGAGTCAGT
TTATTTCGCCCGCCCAACCCTATAATATTTTAGTGTATTATTTCACCGAA
GATCGTACGGCGAGTAATTAATACCATCTCAGTGCGGCAGTCACTTTCAT
TCCCCGTATGAGTGTTATGTTGTGTGGAGGCGATACAGGGCGGGACACCG
AGTGTCCCTTGCCTGGATTGCCTGTTGAGTAGTGTGAGCAAATGCGCCAT
ACGTTGGACAGATCGTTGATTCCCACTTCACAGCAATCTAGATCTTTTGA
GGCCGATCTGTTCCCGATCATCTTGTGTGGTCTATATATAGCTCGTGTTG
CCGGGTGGGACCCGTGTATTCTTCACGATCTAGGGCGTGTGTCTTGGGAC
CTGTACTGTGCACAGATCCCGCACAACCTCTTCACAACGGCAGGCGAGGA
ACTAGATAATCTACTGTAGATAGATAGATCATGATCTGTCCCCAGGCGTG
AAATGTTCCGATCGTACGTACGTCGAGTTTTGTTTTCGTCCCGACGCTGA
CGCCGCCGCCTCCACCGCCACCGCTACCACCTGCCGGCTACCACCGTCTT
CGTGTCCCTGCCGTTGCTGCTATCAATCAACGCGACAGGGGTGACCGACC
TACACTGCCTCCACGTGTGGTCCTTGACGCTCGGTCGCACCGTAGTGTCG
GCGCACATAAAAGCCACCGACCCGGAGAGGGTGCTGGCTTCGGCGCACGA
GATCTGCGAAGACATGGGAGTAGCACATTCCACCATTCAGGTGGGCGTGG
GCGTGGAGGGGGTGGTTAACGGCGGTGAGGGCCAGGGATTAGAGTAGGAG
TACGGTGGCTTGGGGTTGGTGGTGAGGTGGCGGTGGTGATTGGAGATGGT
GGCGGGTGGGGCTGGACGTGAAGGTTGTGGTGGTGGTGGGAGTCAGGATG
GTGGGGCGTGTCGGGTGGGGGTTGGGGTGGAGAGGGAGCGACGGCGGGAG
CGGGGAAGAGAAGGAGAGGGAGGGTCGAGATGGGAGGAGGAAAGAAAGGA
GGGAGGGAGTAGGAGAGAGGGAGGGAATGAGAGGGAGGGATAGAGATAGG
GAAATAAAGATGCTACGGTGTGATAACGAAGATATGAGGAAGAACCTGCA
ATGGCAAGCTCCACGTAGTTTGTGGTTTGTCGGCACAGAGGTAACGTGAC
TCGTAGTTTGGTCTGCGAGTAGTGTGAACCCGCGCAGCAGCAGCGGTACT
ACAGAAGTATCGTCACGCTATATACGCCCGTGTCGTATATACGTTCGACT
CCTTGCATGGTATATAGTTCGGGCGTCAAGTTCTGTTTTTTTTCCCTCAA
GAAGCGGCCGACGCTGTGGTCGTCTTGCGTGATGGCCACTTCTCCCCCCT
TAAGTCCCAAAGAGATAAGACACCTACTCCCCTCATTTTGACTCGTGTTC
CTCTTTTTTGGTTCCGTGCCTGGCCTCCACGCCCCTCCCTCCCCCCCCTC
TCACCCTCCTCTGCTCCCTGGACCATCCGCCAATTTATGGGCGTGCCTGA
TTTGCTTGCCTACTTGCTCCCCCCCTGAGAAATGCCACGACACGTACGGG
TGGTGGCTTATTTTGGCTTATTTTCTGAGCTCCTCCCTTGAGGAGAGCTC
AATGTCTCACCCGAATCACGACTTCGAAGAAGATTGTTCGCCCAGCCCGA
CGAACGTTTTCTATGCGCTGGTCCTAAAACATCTTCACTATGTCGTAAAA
GTATCGTACTAACCGATAGTTAGAGGTCAAACCGGTCGGAAAATATTGCC
TCAGAAGGAAAAAAACTGCAACCCTTACCGTGGGATGAGTGCCCTCGATG
TTTTTGATGTAATATATGGGAAACGTGTATTTAGCGCCCAAGTGTTGGAG
GTGTCTCTGTTAGAAGTAGGAAGGGTGCTCCGTCTCGAAAGGATGCGTGG
TCAATGGTCAACGCCTAAGGCAAGCAACGAATGAATACCCCCCCTTCACC
CCTCTCCCCCGATGTGATTCATTGAGCATCCTCCGATTTCAATGGGCACG
TGGGCTGACCTCGATCCCCTCTACCTCTGTCGGTTTTTTTCCTTTTTTTG
CGGCGGGGTCGAAACCAAACAACGCCATATATCGTTTGACTACGCAGGTG
CAGAAGGACAACTGCCTTCCCGCGAGCTGCAACCACCCCTGCGTGTCGGC
GGTGGGTAGCTGTTGCGGCCCGGACGGGGCCATCTTGTCCCCACGGTCGG
TGGCAGCAGCGGCTGAAGCGGCTGCAGCAGCGGCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8540:266..6650+

>mRNA_M-pyrifera_M_contig8540.19908.1 ID=mRNA_M-pyrifera_M_contig8540.19908.1|Name=mRNA_M-pyrifera_M_contig8540.19908.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig8540:266..6650+ (Macrocystis pyrifera P11B4 male)
ATGGATGCGGCTGTTCTTCATGCGGCAACTGACCTGATGGATGCGGCTGT
TCTTCATGCGGCAACTGACCTGATCCAAAGCGTGGGTGTACTTGTAGCAG
GACTGCTTATCTGGTACAATCCGCGATGGAAGTGGGCTGATCCTATCGCC
ACTCTTTTTTTCGTCGCTCTGATCCAAAGCGTGGGTGTACTTGTAGCAGG
ACTGCTTATCTGGTACAATCCGCGATGGAAGTGGGCTGATCCTATCGCCA
CTCTTTTTTTCGTCGCTCTGGTGGTCCAGTCCACCCGGCAACTGCTGCAG
AGGGCGTTCAACGTTCTCCTCGAAGGCGTGCCGGATAGCATCAACTACGA
CCGCCTTCGTATCCGGCTCTCCGAGATCGAAGGTGGTCCAGTCCACCCGG
CAACTGCTGCAGAGGGCGTTCAACGTTCTCCTCGAAGGCGTGCCGGATAG
CATCAACTACGACCGCCTTCGTATCCGGCTCTCCGAGATCGAAGGGGTGA
CCGACCTACACTGCCTCCACGTGTGGTCCTTGACGCTCGGTCGCACCGTA
GTGTCGGCGCACATAAAAGCCACCGACCCGGAGAGGGTGCTGGCTTCGGC
GCACGAGATCTGCGAAGACATGGGAGTAGCACATTCCACCATTCAGGGGT
GACCGACCTACACTGCCTCCACGTGTGGTCCTTGACGCTCGGTCGCACCG
TAGTGTCGGCGCACATAAAAGCCACCGACCCGGAGAGGGTGCTGGCTTCG
GCGCACGAGATCTGCGAAGACATGGGAGTAGCACATTCCACCATTCAGGT
GCAGAAGGACAACTGCCTTCCCGCGAGCTGCAACCACCCCTGCGTGTCGG
CGGTGGGTAGCTGTTGCGGCCCGGACGGGGCCATCTTGTCCCCACGGTCG
GTGGCAGCAGCGGCTGAAGCGGCTGCAGCAGCGGCTGTGCAGAAGGACAA
CTGCCTTCCCGCGAGCTGCAACCACCCCTGCGTGTCGGCGGTGGGTAGCT
GTTGCGGCCCGGACGGGGCCATCTTGTCCCCACGGTCGGTGGCAGCAGCG
GCTGAAGCGGCTGCAGCAGCGGCT
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