mRNA_M-pyrifera_M_contig85243.19871.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85243.19871.1
Unique NamemRNA_M-pyrifera_M_contig85243.19871.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: A0A5A8DWH6_CAFRO (Hist_deacetyl domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DWH6_CAFRO)

HSP 1 Score: 209 bits (532), Expect = 2.320e-61
Identity = 127/293 (43.34%), Postives = 164/293 (55.97%), Query Frame = 1
Query:    1 LLRQGASVLEVDGEGFGPLHWAAACSSPRVIALLVQHG-APVEAPSDGGETXXXXXXXXXXXXXXXXXXXXXXSARTTNDLFESGLDVAGAWPPGSVNTALRKLSKTALLEADPSLRTAVLHHAACLEHVAPDGHQESEERITAVLRAVRDKKSFSRTEWTEV-SDFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTPVPFTPMVQR---GMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCIF 864
            LL + ASV   DG GF  LHWAA C+   ++ LLV  G APV+A SD GET                           N   E+  DVAG+   G+V+     L + AL+   P LR  +  H  CL H   +GHQE+ +RITA+L+ VR+    +      V S FP A    + RAHS +YV+L+++L+AAV     P+PFTP++QR   G   TE  A      SDT FSPG+F AA+ A GA   AVD V+  +  +A+CVVRPPGHHAGI GLLEG+  SASCGFC+F
Sbjct:  122 LLAKHASVAAQDGHGFTALHWAAVCADAALVRLLVGEGRAPVDAESDAGETPLHRAARVGRLHTCKALLALGADPLHRNHAMETPFDVAGSLD-GAVSDKAASLVRAALVGKCPRLRCRLFTHTDCLLHSTREGHQEAPQRITAILKRVREAGDVAPALLDIVDSGFPRASVHQLTRAHSLQYVELVQSLSAAVANAVAPIPFTPVLQRTVGGASATETKA----GLSDTSFSPGTFMAASRAAGAAIRAVDAVVTGECRHALCVVRPPGHHAGINGLLEGAACSASCGFCVF 409          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: A0A1V9YYH7_9STRA (Histone deacetylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYH7_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.400e-44
Identity = 105/288 (36.46%), Postives = 143/288 (49.65%), Query Frame = 1
Query:    1 LLRQGASVLEVDGEGFGPLHWAAACSSPRVIALLVQHGAPVEAPSD-GGETXXXXXXXXXXXXXXXXXXXXXXSARTTNDLFESGLDVAGAWPPGSVNTALRKLSKTALLEADPSLRTAVLHHAACLEHVAPDGHQESEERITAVLRAVRDKKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTPVPFTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCI 861
            LL+ GAS+   D  G+ PLHWAAA  +  ++      G  ++  S   GET                      S    N       DVAG     ++N   R   + +     PS RT +LHH  C+EH+  +GHQES +RITA+LR + D+ S         SDF  A   TI+R HS +Y+D ++ L   V+     +  TP +Q  ++ T L   K     DT FS G+ RAA  A G+V HA+D  + ++  NA C+VRPPGHHAG  GLL    +S SCGFCI
Sbjct:  146 LLQCGASLTLGDHLGYTPLHWAAAMGNIPMMTAFHSFGVDLDFKSKVNGETALHRAARFGQQESIRFLLSFGASPYLYNAGLALPYDVAGEEDSITINLPTRYAVQCSFTTLQPSFRTLLLHHPDCMEHITIEGHQESPDRITAILRTIEDQASLCHPRVESSSDFNLASFDTILRVHSEKYIDTLKNLHDQVQMQLGLLALTPRIQVQVQGTLLELAKNDAICDTNFSRGTLRAALRAAGSVCHAIDKTVFHEYRNAFCIVRPPGHHAGASGLLR---NSVSCGFCI 430          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: A0A067C4R7_SAPPC (Hist_deacetyl domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C4R7_SAPPC)

HSP 1 Score: 164 bits (415), Expect = 1.590e-42
Identity = 125/290 (43.10%), Postives = 161/290 (55.52%), Query Frame = 1
Query:    1 LLRQGASVLEVDGEGFGPLHWAAACSSPRVIALLVQHGAPVEAPSD-GGETXXXXXXXXXXXXXXXXXXXXXXSARTTNDLFESGLDVAGAWPPGSVNTALRKLSKTALLEADPSLRTAVLHHAACLEHVAPDGHQESEERITAVLRAVRDKKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTP--VPFTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCI 861
            LL  GAS    D  G+ PLHWAAA  +  ++++L+     V  PS   GE XXXXXXXXXXXXXXXX      S ++ N   E   DVAG      V  + R  ++  +    P LRT +LHH  CLEHV   GHQES +R+TA+L A+  + S         S FP A  A + R HS +Y+D ++ L A V+       +  TP +Q  ++ T LA  K  E  DT FS G+ RAA  A G+V  A+D V++  A NA C+VRPPGHHAG  GLL  +    SCGFCI
Sbjct:  141 LLDHGASPALSDPLGYTPLHWAAAVGNAPLVSVLLTGNIDVNDPSHRDGEXXXXXXXXXXXXXXXXXLMAHGGSLQSCNRALEQPYDVAGIQNE-VVCESTRIETQRFMATLHPPLRTLLLHHPDCLEHVTTAGHQESPDRVTAILDAISTQPSLVSPRVELTSAFPMASFAALRRVHSAKYIDTLKRLHAQVQSVSHDGLMVLTPRLQVEVQGTLLAQAKNAEICDTNFSRGTLRAALRAAGSVCAAIDRVVRGDARNAFCIVRPPGHHAGASGLLRDAV---SCGFCI 426          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: L1IC93_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IC93_GUITC)

HSP 1 Score: 162 bits (411), Expect = 1.220e-41
Identity = 114/322 (35.40%), Postives = 150/322 (46.58%), Query Frame = 1
Query:    1 LLRQGASVLEVDGEGFGPLHWAAACSSPRVIALLV---QHGAPVEAPSDGGETXXXXXXXXXXXXXXXXXXXXXXSARTTNDLFESGLDVAGAWPPGS---------------------VNTALRKLSKTALLEADPS-----LRTAVLHHAACLEHVAPDGHQESEERITAVLRAVRDKKSFSRTEWTEVS---DFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTPVPFTPMVQRGMKR--TELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCIF 864
            LL   A VL+ D  G   LHWAA   +  V+ LL+   + G  V+  +  GET                        R  N  F++ LDVA      S                     V+ A RK  + A+L  D        R  V+HH  CLEH    GHQE+ +R+ A+L  +R  +   + E  E+S    F PA + +++R HSR YV  +R L+  V   + PVPFTP VQ  +    T           DTFFS GS+RAA  A G V HA+D V++ KA  A C VRPPGHHAG +GL++      SCGFCIF
Sbjct:  200 LLEAKADVLQRDLRGNNSLHWAAFTGNEGVMGLLLGQRKGGGGVDDANAAGETPMHIASCKGHEKVCVLLLQHGADPRRRNLRFQTPLDVAAVDNASSXXXXXXXXXXSMAKGGKLAMRVSCAARKRVRKAILSYDKDHGGGGCRVLVVHHDDCLEHHTKVGHQEAPDRVRAILAKLRSTRGADKFEDYELSIDCSFEPAREESVLRVHSRAYVSFVRELSEQVASSEGPVPFTPRVQTALASSGTRGGWETADGEGDTFFSKGSYRAALRAAGGVCHAIDQVVRGKARAAFCCVRPPGHHAGKDGLIKDCI---SCGFCIF 518          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: A0A1V9YMR5_9STRA (Histone deacetylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMR5_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.110e-41
Identity = 104/290 (35.86%), Postives = 146/290 (50.34%), Query Frame = 1
Query:    1 LLRQGASVLEVDGEGFGPLHWAAACSSPRVIALLVQHGAPVEAPSDG-GETXXXXXXXXXXXXXXXXXXXXXXSARTTNDLFESGLDVAGAWPPGSVNTALRKLSKTALLEADPSLRTAVLHHAACLEHVAPDGHQESEERITAVLRAVRDKKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTP--VPFTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCI 861
            +L  GAS+   D  G+ PLH AA   +  +++L   HGA + A +   GET                      +AR     F     +  A     V+ A+R  ++  +   +PS+RT +LHH+ C+EHV   GHQES +RI AVL A+    S +       S FP A  A I R H+ +Y+D ++ L   V   ++   +  TP +Q  ++   L   K  E  DT FS G+ RAA  A G+V HA+D V+   A NA C+VRPPGHHAG+ GLL  +    SCGFCI
Sbjct:   60 ILAAGASLQRADPLGYAPLHVAAQLGNLNLLSLFTDHGADINARNARTGETPLHC------------------AAR-----FGQHHAIQCALSASEVDIAMRAATQCYMATREPSMRTLLLHHSDCMEHVTEHGHQESPDRIAAVLTAIDAHPSLNAPRVVLSSAFPMASFAAIRRVHADKYIDTLKNLHDQVPPAQSHGLMVLTPRIQVEVQGALLEQAKTAETCDTNFSRGTLRAALRAAGSVMHAIDRVVTRDARNAFCIVRPPGHHAGVAGLLRDAV---SCGFCI 323          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: R1E4U0_EMIHU (Hist_deacetyl domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E4U0_EMIHU)

HSP 1 Score: 151 bits (381), Expect = 8.820e-38
Identity = 95/228 (41.67%), Postives = 121/228 (53.07%), Query Frame = 1
Query:  247 SGLDVAGAWPPGSVNTALRKLSKTALLEADPSLRTAVLHHAACLEHVAPDGHQESEERITAVLRAV--------------------RDKKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAA--AVERYKTPVPFTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCIF 864
            S LDVAG    G V+   R  ++ A+LE  PS RT +LHH  C  H+  D HQE+ +RI A+L A+                        S +  E +E+ DF  A  A +   H   YV ++   A+  A     +PVP TPMVQ+  +     ALK P  SDT  SPGS+ AA  A GAV  A++ VL  +A NAICVVRPPGHHAG+ GL  GS    SCGFC+F
Sbjct:  256 SPLDVAGKIG-GRVHQPNRMAARRAMLETQPSCRTLLLHHPDCQLHLTGDSHQEAPQRIKAILEAIGRGGXXXXXXXXXXXXXXXXXXXXSVASFELSELCDFEQATTAQLTAVHDAAYVSMVAAAASSMAANPPPSPVPLTPMVQQA-RGAAPGALKDPLTSDTRLSPGSYAAARRAAGAVLRAIEEVLSCRARNAICVVRPPGHHAGVRGLTPGSV---SCGFCVF 478          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: A0A7S3Q3P5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3P5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 9.350e-38
Identity = 110/327 (33.64%), Postives = 152/327 (46.48%), Query Frame = 1
Query:    1 LLRQGASVLEVDGEGFGPLHWAAACSSPRVIALLVQHGAPVEAPSDGGETXXXXXXXXXXXXXXXXXXXXXXSARTT--NDLFESGLDVAG---------AWPPGS-------VNTAL---------RKLSKTALLEADPSLRTAVLHHAACLEHVAP-DGHQESEERITAVLRAV--RDKKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAAAVER---------YKTPVPFTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCIF 864
            L+  GASV+ VD  G  PLHWAA   + +V  +L     P++  +D  ET                       AR+      F+  LD+           A+P          V+ AL         ++  +       P  RT VLHH+ CL+H+   +   E+ +RI++++ A+   D+ S    E     +F  A    + R HS  Y+  +  L+  +E+           + VPFTPMVQR + R     +K   HSDT FS GS RAA  A GA+ HAVD VL  +  NA C+VRPPGHHAGI GLL+G     SCGFCIF
Sbjct:  467 LICAGASVMSVDTFGNSPLHWAARVGNAQVAEMLAIENCPLDLRNDMEETALHWAMRAGRVGLSTTRFLLASGARSALFTKYFKRPLDLGAEGFAGISQDAYPLDKDESSSTIVSVALVDPIARLQEQRQCRANFFSHSPQSRTLVLHHSECLDHLPKSETDWEAPDRISSIINALSRNDEISIRENEIQVSQEFDRASLEFLSRVHSAEYLTFVNNLSKELEKRHNEETEASVPSVVPFTPMVQRTVMREP--TVKKGSHSDTSFSAGSLRAARRAAGAIKHAVDCVLVGRNRNAFCIVRPPGHHAGINGLLDGGE---SCGFCIF 788          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: A0A2R5G8Q1_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8Q1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.010e-36
Identity = 89/212 (41.98%), Postives = 121/212 (57.08%), Query Frame = 1
Query:  244 ESGLDVAGAWPPGSVNTALRKLSKTALLEADPSLRTAVLHHAACLEHVAPDGHQ-----ESEERITAVLRAVRDKKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTPVPFTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCIF 864
            E+  D AG    G +N  +R   +     +    RT VLHH  C +HV P G       E+ ERI A+L  +   +SFS    +  S F  A    + + H+ +YV+++  L+  ++  K PV FTP VQ G+K+T+   +K  EHSDT FS GS  AA  A GAV HA+D V+  K  NA C+VRPPGHHAG+EGLL+ ++   SCGFCIF
Sbjct:  459 ETPFDAAGRDVSGRLNHDVRHKIQLEFWNSTKYFRTLVLHHPDCFDHV-PVGDDDRDVWEAPERIAAILEELSGSESFSSVLIS--SKFAQAKRDMVTKVHTDKYVNMVYALSDELQG-KDPVAFTPRVQTGVKQTKSKEIKRAEHSDTSFSAGSLSAALRASGAVCHAIDRVVGGKHRNAFCLVRPPGHHAGLEGLLDSAS---SCGFCIF 663          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: A0A2R5FZL9_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZL9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.580e-35
Identity = 113/293 (38.57%), Postives = 144/293 (49.15%), Query Frame = 1
Query:    1 LLRQGASVLEVDGEGFGPLHWAAACSSPRVI-ALLVQHGAPVEAPSDGGETXXXXXXXXXXXXXXXXXXXXXXSARTTNDLFESGLDVAGAWPPGS-VNTALRKLSKTALLEADPSLRTAVLHHAACLEHVAPDGHQESEERITAV---LRAVRDKKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTPVPFTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCIF 864
            L+ +GA +  +D EGF  +HWAAA  +   + ALL                XXXXXXX             XX             D AG   P   + + +R  ++ AL EAD  ++T V+ H  CL H     HQE+ ERI+A+   L+A  D +          S F PA  A +  AH+ +Y+DL+  L   V     PVPFTP VQ  M   E   LK     DTFFS GS  AA  AVG V  AVD V+     NA C+VRPPGHHAG+ GLL+   ++ SCGFCIF
Sbjct:  333 LIERGAEIRTLDAEGFSAVHWAAAMGNCAAMEALLDAXXXXXXXXXXXXXXXXXXXXXGRDACIKSLVRDYXXXXXXXXXXXXXXXDAAGYLSPNKQIASRVRAAARKALFEADTRMKTLVVMHEECLGHRTAQAHQEAPERISAIHGKLKAGIDPECLQFC-----SAFEPATKALLRYAHNDKYIDLVFDLHQKVASLGRPVPFTPRVQV-MNGLEENQLKDERGCDTFFSEGSLPAARRAVGGVCCAVDHVVSGTNRNAFCLVRPPGHHAGVNGLLD---NAVSCGFCIF 616          
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Match: A0A7S4AC53_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC53_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.750e-35
Identity = 86/213 (40.38%), Postives = 116/213 (54.46%), Query Frame = 1
Query:  301 RKLSKTALLEADPSLRTAVLHHAACLEHVAP-DGHQESEERITAVLRAVR------DKKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTP------------------VPFTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVLQNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCIF 864
            R+ ++  L E     RT VL+H  CLEH+   +G  E+ +RI +++  ++      D  S  + E     +F  A    + R HS  Y++ +  L+  +ER +                    VPFTPMVQR + + E +++K+ EHSDT FS GS RAA  A GAV HAVD VL  +  NA CVVRPPGHHAGI GLL+G     SCGFCIF
Sbjct:  727 RREARANLFECSSQSRTLVLYHPECLEHIPKAEGDWENPDRINSIMERIKGIRIGSDIPSIYQREIQISKEFERANLDLLSRVHSTEYLNFVNELSKDLERQQKEQNANSGRNKDDTSGPAPVVPFTPMVQRSVTKVEESSVKISEHSDTSFSVGSLRAARRAAGAVQHAVDCVLVGRHRNAFCVVRPPGHHAGINGLLDGGE---SCGFCIF 936          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85243.19871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DWH6_CAFRO2.320e-6143.34Hist_deacetyl domain-containing protein n=2 Tax=Ca... [more]
A0A1V9YYH7_9STRA1.400e-4436.46Histone deacetylase n=1 Tax=Thraustotheca clavata ... [more]
A0A067C4R7_SAPPC1.590e-4243.10Hist_deacetyl domain-containing protein n=1 Tax=Sa... [more]
L1IC93_GUITC1.220e-4135.40Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A1V9YMR5_9STRA2.110e-4135.86Histone deacetylase n=1 Tax=Achlya hypogyna TaxID=... [more]
R1E4U0_EMIHU8.820e-3841.67Hist_deacetyl domain-containing protein n=1 Tax=Em... [more]
A0A7S3Q3P5_9STRA9.350e-3833.64Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2R5G8Q1_9STRA2.010e-3641.98Ankyrin repeat domain-containing protein 1 n=1 Tax... [more]
A0A2R5FZL9_9STRA1.580e-3538.57Ankyrin repeat domain-containing protein 1 n=1 Tax... [more]
A0A7S4AC53_9STRA1.750e-3540.38Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85243contigM-pyrifera_M_contig85243:3..866 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.8
Seed ortholog evalue1.5e-38
Seed eggNOG ortholog55529.EKX33460
KEGG koko:K21413
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515
EggNOG free text desc.Ankyrin repeat and sterile alpha motif
EggNOG OGsCOG0123@1,COG0666@1,KOG0507@2759,KOG1343@2759
COG Functional cat.BQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size864
Cds size864
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.1081088-CDS-M-pyrifera_M_contig85243:2..8661622816761.1081088-CDS-M-pyrifera_M_contig85243:2..866Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85243 3..866 -
1692278162.7360916-CDS-M-pyrifera_M_contig85243:2..8661692278162.7360916-CDS-M-pyrifera_M_contig85243:2..866Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85243 3..866 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85243.19871.1prot_M-pyrifera_M_contig85243.19871.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85243 3..866 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85243.19871.1

>prot_M-pyrifera_M_contig85243.19871.1 ID=prot_M-pyrifera_M_contig85243.19871.1|Name=mRNA_M-pyrifera_M_contig85243.19871.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=288bp
LLRQGASVLEVDGEGFGPLHWAAACSSPRVIALLVQHGAPVEAPSDGGET
PLHRASRLGRADNVKQLVQLGASARTTNDLFESGLDVAGAWPPGSVNTAL
RKLSKTALLEADPSLRTAVLHHAACLEHVAPDGHQESEERITAVLRAVRD
KKSFSRTEWTEVSDFPPAPDATIVRAHSRRYVDLIRTLAAAVERYKTPVP
FTPMVQRGMKRTELAALKVPEHSDTFFSPGSFRAATHAVGAVTHAVDLVL
QNKAHNAICVVRPPGHHAGIEGLLEGSTHSASCGFCIF
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mRNA from alignment at M-pyrifera_M_contig85243:3..866-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85243.19871.1 ID=mRNA_M-pyrifera_M_contig85243.19871.1|Name=mRNA_M-pyrifera_M_contig85243.19871.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig85243:3..866- (Macrocystis pyrifera P11B4 male)
TTGCTGCGCCAAGGTGCGAGTGTGCTGGAGGTGGATGGCGAAGGGTTTGG TCCTCTCCACTGGGCAGCAGCGTGCTCGTCGCCACGAGTCATCGCCTTGC TGGTGCAGCACGGAGCTCCTGTAGAAGCGCCTTCGGATGGAGGAGAAACG CCGCTGCATCGAGCCAGCCGCTTAGGTCGAGCCGACAATGTGAAGCAACT GGTGCAATTGGGAGCTTCGGCGCGGACCACAAATGACCTCTTTGAAAGCG GCCTCGACGTGGCTGGCGCTTGGCCTCCTGGGTCAGTGAACACAGCGCTT CGGAAACTCTCCAAAACAGCATTGCTCGAAGCTGACCCTTCGCTACGCAC TGCAGTGCTACACCACGCGGCTTGTCTCGAACACGTGGCGCCTGACGGAC ACCAGGAGAGCGAGGAGCGCATCACGGCCGTGCTGCGGGCGGTGCGGGAT AAGAAGAGCTTCTCCCGCACCGAGTGGACCGAGGTCAGCGATTTCCCGCC CGCGCCAGACGCCACCATTGTGCGCGCACACTCCAGACGGTACGTCGACC TCATCCGCACGCTAGCCGCAGCGGTAGAGCGCTACAAGACGCCGGTGCCA TTCACCCCAATGGTCCAACGAGGCATGAAACGCACCGAGCTTGCTGCACT CAAGGTCCCAGAACACTCGGACACCTTCTTCTCCCCAGGATCGTTCCGGG CAGCCACGCACGCCGTTGGGGCAGTCACACATGCAGTCGACCTCGTGCTC CAGAACAAGGCCCACAACGCCATCTGCGTCGTCAGGCCTCCGGGACACCA CGCTGGAATCGAAGGCCTCCTCGAAGGCTCCACGCACTCGGCCAGCTGCG GCTTCTGCATCTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85243:3..866-

>mRNA_M-pyrifera_M_contig85243.19871.1 ID=mRNA_M-pyrifera_M_contig85243.19871.1|Name=mRNA_M-pyrifera_M_contig85243.19871.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1728bp|location=Sequence derived from alignment at M-pyrifera_M_contig85243:3..866- (Macrocystis pyrifera P11B4 male)
TTGCTGCGCCAAGGTGCGAGTGTGCTGGAGGTGGATGGCGAAGGGTTTGG
TCCTCTCCACTGGGCAGCAGCGTGCTCGTCGCCACGAGTCATCGCCTTGC
TGGTGCAGCACGGAGCTCCTGTAGAAGCGCCTTCGGATGGAGGAGAAACG
CCGCTGCATCGAGCCAGCCGCTTAGGTCGAGCCGACAATGTGAAGCAACT
GGTGCAATTGGGAGCTTCGGCGCGGACCACAAATGACCTCTTTGAAAGCG
GCCTCGACGTGGCTGGCGCTTGGCCTCCTGGGTCAGTGAACACAGCGCTT
CGGAAACTCTCCAAAACAGCATTGCTCGAAGCTGACCCTTCGCTACGCAC
TGCAGTGCTACACCACGCGGCTTGTCTCGAACACGTGGCGCCTGACGGAC
ACCAGGAGAGCGAGGAGCGCATCACGGCCGTGCTGCGGGCGGTGCGGGAT
AAGAAGAGCTTCTCCCGCACCGAGTGGACCGAGGTCAGCGATTTCCCGCC
CGCGCCAGACGCCACCATTGTGCGCGCACACTCCAGACGGTACGTCGACC
TCATCCGCACGCTAGCCGCAGCGGTAGAGCGCTACAAGACGCCGGTGCCA
TTCACCCCAATGGTCCAACGAGGCATGAAACGCACCGAGCTTGCTGCACT
CAAGGTCCCAGAACACTCGGACACCTTCTTCTCCCCAGGATCGTTCCGGG
CAGCCACGCACGCCGTTGGGGCAGTCACACATGCAGTCGACCTCGTGCTC
CAGAACAAGGCCCACAACGCCATCTGCGTCGTCAGGCCTCCGGGACACCA
CGCTGGAATCGAAGGCCTCCTCGAAGGCTCCACGCACTCGGCCAGCTGCG
GCTTCTGCATCTTCTTGCTGCGCCAAGGTGCGAGTGTGCTGGAGGTGGAT
GGCGAAGGGTTTGGTCCTCTCCACTGGGCAGCAGCGTGCTCGTCGCCACG
AGTCATCGCCTTGCTGGTGCAGCACGGAGCTCCTGTAGAAGCGCCTTCGG
ATGGAGGAGAAACGCCGCTGCATCGAGCCAGCCGCTTAGGTCGAGCCGAC
AATGTGAAGCAACTGGTGCAATTGGGAGCTTCGGCGCGGACCACAAATGA
CCTCTTTGAAAGCGGCCTCGACGTGGCTGGCGCTTGGCCTCCTGGGTCAG
TGAACACAGCGCTTCGGAAACTCTCCAAAACAGCATTGCTCGAAGCTGAC
CCTTCGCTACGCACTGCAGTGCTACACCACGCGGCTTGTCTCGAACACGT
GGCGCCTGACGGACACCAGGAGAGCGAGGAGCGCATCACGGCCGTGCTGC
GGGCGGTGCGGGATAAGAAGAGCTTCTCCCGCACCGAGTGGACCGAGGTC
AGCGATTTCCCGCCCGCGCCAGACGCCACCATTGTGCGCGCACACTCCAG
ACGGTACGTCGACCTCATCCGCACGCTAGCCGCAGCGGTAGAGCGCTACA
AGACGCCGGTGCCATTCACCCCAATGGTCCAACGAGGCATGAAACGCACC
GAGCTTGCTGCACTCAAGGTCCCAGAACACTCGGACACCTTCTTCTCCCC
AGGATCGTTCCGGGCAGCCACGCACGCCGTTGGGGCAGTCACACATGCAG
TCGACCTCGTGCTCCAGAACAAGGCCCACAACGCCATCTGCGTCGTCAGG
CCTCCGGGACACCACGCTGGAATCGAAGGCCTCCTCGAAGGCTCCACGCA
CTCGGCCAGCTGCGGCTTCTGCATCTTC
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