mRNA_M-pyrifera_M_contig85242.19870.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: A0A127MII6_9SPHN (Uncharacterized protein n=1 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MII6_9SPHN) HSP 1 Score: 418 bits (1075), Expect = 1.140e-145 Identity = 226/259 (87.26%), Postives = 242/259 (93.44%), Query Frame = 1 Query: 4 AAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLGTQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKIL 780 AAGLAMT A+GDVSDELSSRATVQIIEANP +R+ QA AA+RLRA+PLI+EVRVLPPEEI+ALIEPWLG QDL DDIPLPALID+K+ RA T AEYQSLRSALQ +APGAR+EPSSGYIAPV SLVRSFQWIAFGLV LLALATGAAVIISARSALNTH+ETIAVVHLLGGTDQQISRLFQRRIALDALLGGL+GL GGA IIWLIS QL+ALGSGLVQS+GLDWWSWLIIAVIPILGM LAM+TAKLTVIGALKKIL Sbjct: 40 AAGLAMTRAMGDVSDELSSRATVQIIEANPDSRNRQATAAAERLRALPLIEEVRVLPPEEIEALIEPWLGAQDLADDIPLPALIDLKLTRAGTSAEYQSLRSALQPIAPGARVEPSSGYIAPVISLVRSFQWIAFGLVGLLALATGAAVIISARSALNTHSETIAVVHLLGGTDQQISRLFQRRIALDALLGGLIGLAGGAAIIWLISIQLTALGSGLVQSIGLDWWSWLIIAVIPILGMCLAMITAKLTVIGALKKIL 298
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: UPI001593DF28 (cell division protein n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001593DF28) HSP 1 Score: 416 bits (1070), Expect = 6.570e-145 Identity = 223/258 (86.43%), Postives = 241/258 (93.41%), Query Frame = 1 Query: 4 AAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLGTQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKI 777 AAGLAMT A+GDVSDELSSRATVQI+EAN + RS QA A+RLR+IPL++EVRVLPPEEI+ALIEPWLGTQDL +DIPLPAL+DVK+ RAATDAEYQSLRS LQ +APGARIEPSSGYIAPV SLVRSFQWIAFGLVALLALAT +AVIISARSALNTH ETIAVVHLLGGTD+QISRLFQRRIALDALLGGL+GL+GG IIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAM+TA+ TVIGALKKI Sbjct: 40 AAGLAMTRAMGDVSDELSSRATVQIVEANSEIRSDQAAAVAERLRSIPLVEEVRVLPPEEIEALIEPWLGTQDLGEDIPLPALVDVKLARAATDAEYQSLRSDLQRIAPGARIEPSSGYIAPVISLVRSFQWIAFGLVALLALATASAVIISARSALNTHGETIAVVHLLGGTDEQISRLFQRRIALDALLGGLIGLVGGGAIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMITARWTVIGALKKI 297
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: A0A220W8I5_9SPHN (Cell division ABC transporter subunit FtsX n=6 Tax=Sphingomonadales TaxID=204457 RepID=A0A220W8I5_9SPHN) HSP 1 Score: 415 bits (1066), Expect = 2.670e-144 Identity = 224/259 (86.49%), Postives = 239/259 (92.28%), Query Frame = 1 Query: 4 AAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLGTQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKIL 780 AAGLAMT AIGDVSDELSSRATVQIIEA+P+ RS QA AA RLRA+PLI+EVRVLPPEEIKALIEPWLG+QDL +DIPLPALID+K+VR ATD EYQSLR ALQ +APGAR+EPSSGYIAPV +LVRS QWIAFGLV LLALATGAAVIISARSALNTH ETIAVVHLLGGTDQQISRLFQRRIALDALLGGL+GL GG IIWLIS QL+ALGSGLV+SVGLDWWSWLIIA IPILGMFLAMVTA+LTVIGALKKIL Sbjct: 40 AAGLAMTRAIGDVSDELSSRATVQIIEADPEVRSRQATAAAARLRALPLIEEVRVLPPEEIKALIEPWLGSQDLAEDIPLPALIDLKLVRVATDEEYQSLRGALQEIAPGARVEPSSGYIAPVIALVRSLQWIAFGLVGLLALATGAAVIISARSALNTHGETIAVVHLLGGTDQQISRLFQRRIALDALLGGLIGLAGGTAIIWLISSQLTALGSGLVESVGLDWWSWLIIAAIPILGMFLAMVTARLTVIGALKKIL 298
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: A0A1B6ZC32_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6ZC32_9SPHN) HSP 1 Score: 358 bits (918), Expect = 8.730e-122 Identity = 192/257 (74.71%), Postives = 224/257 (87.16%), Query Frame = 1 Query: 4 AAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLGTQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKK 774 AAGLA+ A G+V+D+LSSRATVQIIEAN + R+ QA A RLR + L+++VRVLP +EI LIEPWLGTQ+L +DIPLPALID+K+ R A+D+E QSLRS +Q +A AR+EPSSGYIAPV +LVRS QWIAFGLVALLALAT AAVIISAR+ LNTH ETIAVVHLLGGTD QISRLFQRRIALDALLGG++GL+GGA IIWLI+ QLSALGSGLVQS+GL W SWLIIA++PILGMFLAMVTA++TV+GALKK Sbjct: 40 AAGLALVQAAGNVTDDLSSRATVQIIEANAEVRARQARAVAARLRGLSLVEQVRVLPQKEIDELIEPWLGTQNLGEDIPLPALIDLKLTRTASDSELQSLRSVIQPLAADARVEPSSGYIAPVIALVRSLQWIAFGLVALLALATAAAVIISARATLNTHRETIAVVHLLGGTDHQISRLFQRRIALDALLGGMIGLVGGAAIIWLIAMQLSALGSGLVQSLGLSWLSWLIIALVPILGMFLAMVTARMTVMGALKK 296
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: A0A6H2DP18_9SPHN (Cell division protein n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DP18_9SPHN) HSP 1 Score: 324 bits (831), Expect = 1.450e-108 Identity = 174/259 (67.18%), Postives = 213/259 (82.24%), Query Frame = 1 Query: 4 AAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLGTQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKIL 780 AAGLA + A V+DELSSRATVQI+EANP +R+ Q AA LR + + EVRVLP EI+ALIEPWLGT+ L +IP+PALID+K+ R + E Q+LR+A++ +A AR+EPSSG+I+PV SLVRS QWIA GLVALLALATGAA II+AR+ALNTH ETI+V+HLLG TD+QISRLFQRRIALDALLGGLLGL+GG LI+WL+S Q+SALGSG QS GL W SWLIIA IPI+GM +AM +A++T++GAL+KIL Sbjct: 40 AAGLAFSEAARSVTDELSSRATVQIVEANPDSRTQQTNDAAAGLRGLDFVSEVRVLPQSEIEALIEPWLGTEGLAGEIPIPALIDLKLDRPVNEKELQALRNAVKPLARSARVEPSSGFISPVISLVRSLQWIAAGLVALLALATGAATIIAARAALNTHRETISVIHLLGATDRQISRLFQRRIALDALLGGLLGLLGGGLIVWLVSMQVSALGSGXXQSXGLSWISWLIIAAIPIMGMLIAMFSARMTIMGALRKIL 298
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: A0A1N6CQ09_9SPHN (Cell division transport system permease protein n=2 Tax=Parasphingorhabdus marina TaxID=394732 RepID=A0A1N6CQ09_9SPHN) HSP 1 Score: 319 bits (817), Expect = 1.930e-106 Identity = 174/260 (66.92%), Postives = 208/260 (80.00%), Query Frame = 1 Query: 1 TAAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLGTQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKIL 780 TAAGLA + A VSD+LSSR TVQI+EAN R+ Q+E A LR + ++ +VRVLP EI+ LIEPWLGTQD+ +DIPLPALIDV + R A AE + L+SA ++ AR+EPSSG I PV LVRS QWIA GLV LLA AT AAVIISAR+ALNTH ETI ++HLLGGTD+QIS+LFQRRIALDALLGG++GL+GGA IIWL+ QLSALGSGLVQS+GL W S LIIA IPI+GM LAM+TA++T++GALKKIL Sbjct: 39 TAAGLAFSEAARSVSDDLSSRVTVQIVEANADVRNRQSEDVAASLRGLDIVAQVRVLPEGEIRELIEPWLGTQDIGEDIPLPALIDVTLARKAGPAELEELQSAAAQLSSAARVEPSSGLIEPVIDLVRSLQWIALGLVFLLAAATAAAVIISARAALNTHDETIGIIHLLGGTDRQISKLFQRRIALDALLGGIIGLVGGAAIIWLLGMQLSALGSGLVQSLGLSWQSMLIIAAIPIMGMLLAMMTARMTIMGALKKIL 298
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: UPI001AA05597 (cell division protein n=2 Tax=Parasphingorhabdus TaxID=2709685 RepID=UPI001AA05597) HSP 1 Score: 318 bits (816), Expect = 3.830e-106 Identity = 182/270 (67.41%), Postives = 217/270 (80.37%), Query Frame = 1 Query: 1 TAAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLG----TQD------LEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKIL 780 TA GLA A +VSD+LSSRATVQI+EANP ++ Q+ AA RLR + L++EVRVLPP+EI+ LI PWLG TQD L +DIPLPALID+K+VR A E LR+A++ +A AR+EPSSG IAPV +LV+S QWIAFGLVALLA+AT AAVIISAR+ALNTH ETI V+HLLGGTD+QISRLFQRRIALDALLGG+LGLI G II L+ QLSALGSGLV+S+GL W+SWLII +PILGM LAMVTA++TV+GAL+KIL Sbjct: 39 TATGLAFAEAGRNVSDQLSSRATVQIVEANPDLKARQSNDAAARLRGMALVEEVRVLPPQEIEDLIAPWLGQTAGTQDELEAGSLLEDIPLPALIDLKLVRPAGPKELDELRAAVRPLADSARVEPSSGLIAPVIALVQSLQWIAFGLVALLAMATAAAVIISARAALNTHKETIGVIHLLGGTDRQISRLFQRRIALDALLGGILGLICGTAIILLLGMQLSALGSGLVESLGLSWYSWLIIGAVPILGMTLAMVTARMTVMGALRKIL 308
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: UPI000D69BC3F (FtsX-like permease family protein n=1 Tax=Sphingorhabdus sp. EL138 TaxID=2073156 RepID=UPI000D69BC3F) HSP 1 Score: 313 bits (802), Expect = 4.780e-104 Identity = 179/268 (66.79%), Postives = 213/268 (79.48%), Query Frame = 1 Query: 1 TAAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLG--------TQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKIL 780 TA GLA T A +VSD+LSSRATVQIIEANP ++ Q AA RLR + L++EVR+LP +EI+ LI PWLG T L +DIPLPALID+K+ + ++ E ++LR+ ++ +A ARIEPSS IAPV +LVRS QWIAFGLV LLA+AT AAVIISAR+ALNTH ETI V+HLLGGTD+QISRLFQRRIALDALLGG+LGLI GA II L+ QLSALGSGLVQS+ L W+SWLII IPILGM LAMVTA++TV+GALKKIL Sbjct: 39 TAIGLAFTEAGQNVSDQLSSRATVQIIEANPDLKAQQTSDAAARLRGMELVEEVRILPSKEIEDLIAPWLGQSADGGQDTGGLLEDIPLPALIDLKLAQPISEKELEALRTGIRPLAASARIEPSSALIAPVIALVRSLQWIAFGLVILLAIATAAAVIISARAALNTHKETIGVIHLLGGTDRQISRLFQRRIALDALLGGVLGLICGAAIILLLGMQLSALGSGLVQSLDLSWYSWLIIGAIPILGMILAMVTARMTVMGALKKIL 306
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: A0A2E4CTQ3_9SPHN (Cell division protein n=1 Tax=Citromicrobium sp. TaxID=2024827 RepID=A0A2E4CTQ3_9SPHN) HSP 1 Score: 236 bits (601), Expect = 6.810e-74 Identity = 125/258 (48.45%), Postives = 186/258 (72.09%), Query Frame = 1 Query: 7 AGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLGTQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKIL 780 AGL++ + GD ELS ATVQI+EA+P TR+ QAE A + L+++P+++E R +P EE+ AL+EPWLG + +P+PALIDV++ A +A ++LR L VAP AR++ S ++ PVF+ + S Q++A LV LLA+ + AAV ++ARSAL + ETIA+VHLLGGTD QI++LFQR I D+++GG++GL+ G + + Q +AL SG++ S GLDW W++IA+IPILG+ LA+ TA+ TV+ A++K+L Sbjct: 28 AGLSLGNLAGDARSELSGGATVQILEADPATRARQAEAAQELLQSLPMVEESRQIPQEELDALLEPWLGASGDAETVPVPALIDVRLGGRADEAAIENLRQQLAEVAPDARVDAQSSWLRPVFNALTSLQYVALALVLLLAVTSAAAVFLAARSALGNNRETIAIVHLLGGTDGQIAQLFQRAILRDSIIGGIVGLLLGLAAVLGLGYQFAALDSGMIASGGLDWLDWIVIALIPILGVVLAVATARFTVLAAVRKML 285
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Match: A0A3D1P276_9SPHN (Cell division protein n=1 Tax=Novosphingobium sp. TaxID=1874826 RepID=A0A3D1P276_9SPHN) HSP 1 Score: 233 bits (594), Expect = 7.550e-73 Identity = 127/259 (49.03%), Postives = 181/259 (69.88%), Query Frame = 1 Query: 4 AAGLAMTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVLPPEEIKALIEPWLGTQDLEDDIPLPALIDVKMVRAATDAEYQSLRSALQSVAPGARIEPSSGYIAPVFSLVRSFQWIAFGLVALLALATGAAVIISARSALNTHTETIAVVHLLGGTDQQISRLFQRRIALDALLGGLLGLIGGALIIWLISGQLSALGSGLVQSVGLDWWSWLIIAVIPILGMFLAMVTAKLTVIGALKKIL 780 AAGLA+++ + SD LS ATVQ++EANP R QA+ AA+ L+A P + +VR++ +E++ LIEPWLG + ED IP+PAL+DV++ + LR ++ VAP AR++ S ++ PVFS + S QW+A LVALL A AAV+++ R+AL T+ ETI +VHLLGGTD QI+R+FQR I DA GG +GL G +++ L+ + LG+GLV S LDW W+++A++PI G+ LAMVTA+LTVI AL+K+L Sbjct: 26 AAGLALSNTASNASDALSGGATVQVVEANPAERDRQAKEAARVLQATPGVIDVRIVSQQEVEKLIEPWLGVRTGEDGIPVPALVDVRLRDGVDGEKLGQLRRQVRQVAPAARVDAQSTWLKPVFSAIDSLQWLALALVALLGFALAAAVLLAVRTALGTNRETIEIVHLLGGTDSQIARIFQRTIGFDAAGGGAVGLGLGLVVVLLLGQRFEGLGAGLVDSGALDWIDWVLLALVPIAGVALAMVTARLTVIRALRKML 284 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85242.19870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85242.19870.1 >prot_M-pyrifera_M_contig85242.19870.1 ID=prot_M-pyrifera_M_contig85242.19870.1|Name=mRNA_M-pyrifera_M_contig85242.19870.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp MTHAIGDVSDELSSRATVQIIEANPQTRSSQAEVAAKRLRAIPLIKEVRVback to top mRNA from alignment at M-pyrifera_M_contig85242:84..866- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85242.19870.1 ID=mRNA_M-pyrifera_M_contig85242.19870.1|Name=mRNA_M-pyrifera_M_contig85242.19870.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig85242:84..866- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85242:84..866- >mRNA_M-pyrifera_M_contig85242.19870.1 ID=mRNA_M-pyrifera_M_contig85242.19870.1|Name=mRNA_M-pyrifera_M_contig85242.19870.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig85242:84..866- (Macrocystis pyrifera P11B4 male)back to top |