mRNA_M-pyrifera_M_contig85233.19865.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: A0A7S4IX01_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IX01_9EUKA) HSP 1 Score: 135 bits (340), Expect = 2.100e-33 Identity = 79/190 (41.58%), Postives = 112/190 (58.95%), Query Frame = 1 Query: 13 WLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGRILKSGQSGH---DHFKLKVLIKDICNKIYPKITHFMADLKICILQLLELDELDKFVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGEAGFMTKARMDVIPISGLIVSKLCRLENEARTVLDLWE 573 WL + V +YL GFE DA+P +YLD PPA + VR+NL+LL RI KS +S + D FK+ + K +C+K+Y I F+ D+ C+ +LEL + F+ I+ + K K Q+K QL ++KD YL DM+ +E + F RM IP+SGL++SK CRLENE ++VLDLWE Sbjct: 41 WLSQIDNVVTQYLVNYGFEVDAVPVHYLDEPPASISAVRRNLVLLRRIFKSHKSSNKANDIFKVHEMKKSLCDKVYRIINDFIRDINFCV--MLELKLPNSFIPTSNAQLIEMINKEK-------FPQQLKQQLIDVVKDKEYLEDMKRMENDKEFSKSRRMVTIPVSGLVMSKFCRLENEHKSVLDLWE 221
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: A0A7S4HH96_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HH96_9EUKA) HSP 1 Score: 110 bits (276), Expect = 8.760e-25 Identity = 69/194 (35.57%), Postives = 105/194 (54.12%), Query Frame = 1 Query: 1 LSVWWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGRILKSGQSGHDHFKLKVLIKDICNKIYPKITHFMADLKICILQLLELDELDK-FVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGE--AGFMTKARMDVIPISGLIVSKLCRLENEARTVLDLWE 573 +S WWL + V EY+ G+ DA+P+NY+D PP D A V+ NL +L +L+ G+ +K LIK + N IYP I F+ D KI + + ++D K F V+ A +K D+ Q++ + M+KD+ YL +M ++E A + ++PISGLIV RLENE +TV +LW+ Sbjct: 445 ISNWWLTEIENAVSEYMIGLGYIQDALPENYVDQPPEDLAKVKWNLKVLYLLLRDGKLSSG---VKRLIKRLQNLIYPVIDSFVQDAKIVLSEQFKMDLTGKDFSLPQVEEAFQK--------EKDSIDPQIRDWIASMIKDIHYLNEMHKLEDPEYASNQADPSLHIVPISGLIVGIFVRLENECKTVCELWD 627
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: D3BT49_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BT49_POLPP) HSP 1 Score: 105 bits (263), Expect = 4.780e-23 Identity = 66/204 (32.35%), Postives = 108/204 (52.94%), Query Frame = 1 Query: 1 LSVWWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGRILKS-GQSGHDHFKLKVLIKDICNKIYPKITHFMADLKICILQLLELDE------------LDKFVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGEAGFMTKARMDVIPISGLIVSKLCRLENEARTVLDLWE 573 LS WWL L+ + +LS F+ +A+P +YL+ PP + A VR NL LL +L S G+ H + K L++ + + IYP I F+ K+ IL + E L+ K++ + K + RC +Q+ + KD+ Y+++M+ +E ++ R+D++PISG+ +L RLENE RTVLD+W+ Sbjct: 542 LSQWWLALIRENTESFLSKLSFDFNAVPADYLEKPPQNIAAVRYNLDLLHNLLPSNGEDTHIRIQFKKLVEKLNHSIYPVIELFVLKCKLVILDSFDALENTSIAQMETSGHLEMSYLKELFNRRKDVTDKHRC-----------NQIERLYKDIEYILEMKRLELNP---SEKRLDIVPISGIAFGRLHRLENEMRTVLDIWK 731
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: UPI000644C48C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C48C) HSP 1 Score: 94.7 bits (234), Expect = 3.650e-19 Identity = 63/205 (30.73%), Postives = 104/205 (50.73%), Query Frame = 1 Query: 1 LSVWWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGRILKSGQSGHDHFKL---KVLIKDICNKIYPKITHFMADLKICILQ--------LLELDE---LDKFVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGEAGFMTKARMDVIPISGLIVSKLCRLENEARTVLDLWE 573 LS WW+ + V+ +L F+ +A+P +Y++ PP + A VR NL LL IL G + K +++ + +YPKI F+ K+ +L L EL+ LD + + K+ + ++C H D + KD+ YL+DM+ +E T+ R+D++ ISG+ +L RLENE RTV++LW+ Sbjct: 615 LSQWWMAISREEVESFLLKRQFDFNAVPQDYMEKPPQNMAAVRFNLDLLHDILTPNGGGQTKSSVQFSKTVVEKLVRDVYPKIELFVVKCKLVVLDCIGAFDVSLAELEANGMLDMDRLRQLYLMHKQNLERQKCSHIDR-----------IFKDIEYLLDMRRLEDTTS-PTEKRLDIVTISGITFGRLHRLENEMRTVVELWK 807
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: L8HFW0_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HFW0_ACACA) HSP 1 Score: 89.7 bits (221), Expect = 1.910e-17 Identity = 56/188 (29.79%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 10 WWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADT-AIVRKNLILLGRILKSGQSGHDHFKLKVLIKDICNKIYPKITHFMADLKICILQLLELDELDKFVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGEAGFMTKARMDVIPISGLIVSKLCRLENEARTVLDLW 570 WWL L+ ++L G+ D +P NYL+ PP AI+ N D +++ LIK + ++IYP+I F+++ +I + + + + F ++ + K +T A+V+ + M+KD+ YL M+ +E K +D++P++GLIV + RLENE RTVLD+W Sbjct: 432 WWLSLIKDECDKFLERRGYNPDVVPANYLEEPPNSIQAILNPN--------------EDKHQVQRLIKRLKSEIYPQIDRFISNAEIVLAEQFNIP-YETFALEEAEL--------KFAAERETLGAEVRDWIEDMLKDILYLRQMKRLEKPQNRKEKI-LDIVPVTGLIVGRFYRLENELRTVLDVW 595
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: A0A2P6MY09_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MY09_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 2.780e-16 Identity = 63/215 (29.30%), Postives = 107/215 (49.77%), Query Frame = 1 Query: 10 WWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGRILKS--------GQSGH-------DHFK-------LKVLIKDICNKIYPKITHFMADLKICILQLLELDELDKFVFKDVKSAIKKLPKG-KRCCHSDTCVAQVKH--QLRGMMK---DLSYLVDMQEIEGEAGFMTKARMDVIPISGLIVSKLCRLENEARTVLDLW 570 WWL L+ V +L F HDA+P NY++ P D A VR NL L+ +I+ S Q G+ DH +K+LIK++ ++IYP + ++ K + + +DE + + + I+ K K+ D+ ++ Q MMK D+ Y+ M+ +E + + D++PI+GLI+S+ R ENE +TV+++W Sbjct: 183 WWLTLIREEVDSFLRRIDFCHDAVPTNYIEKQPEDMARVRNNLSLVEQIMNSFNAMQLQRRQRGYTLDTSLVDHSDKDNIASGVKMLIKELRDRIYPVLDGYVGSCKCILYDHVNVDECEHLSMEKITELIELTAKEMKKKDEKDSAQRWTRYEPQYNKMMKLISDVRYIERMKLLEENPEKVHEK--DIVPITGLIMSRFARFENELQTVIEVW 395
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: D3BUM5_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BUM5_POLPP) HSP 1 Score: 85.9 bits (211), Expect = 4.530e-16 Identity = 59/212 (27.83%), Postives = 108/212 (50.94%), Query Frame = 1 Query: 10 WWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGRILK-SGQSGHDHFKLKVLIKDICNKIYPKITHFMADLKICILQLL-----------ELDELDKFVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGE-------------AGFMTKARMDVIPISGLIVSKLCRLENEARTVLDLW 570 WWLQL+++ V YL GF +P NY+D PP+ + V++NL ++ +L+ S Q+ +D +LK L+ + KIY +I F+ + +L +L ELD+ + + + + KK P + + C ++KD+ Y+ +M+ +E A + D++PI+GLI S+L R+++E RTV++++ Sbjct: 930 WWLQLISSTVDTYLCSKGFYQGVVPINYIDEPPSSISKVKENLRIVNLVLRPSTQTEYDD-RLKNLMAPLKKKIYHQIDEFLCLAENLLLDVLIKSKHLFDEKMELDKRENWDLRAIMDVFKKQPPQHQDKPMEVC---------SLIKDILYIREMKNLEERFYSNEILSASHPLASGEKLSLSDIVPITGLIFSRLLRIKHELRTVIEVF 1131
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: A0A2P6NPS9_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NPS9_9EUKA) HSP 1 Score: 73.9 bits (180), Expect = 9.970e-13 Identity = 57/210 (27.14%), Postives = 94/210 (44.76%), Query Frame = 1 Query: 1 LSVWWLQLVTTRVKEYLSCSG-----------FEHDAIPDNYLDCPPADTAIVRKNLILLGRILK------SGQSGHDHFKLKVLIKDICNKIYPKITHFMADLKICILQLLELDELDKFVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGE--AGFMTKARMD-VIPISGLIVSKLCRLENEARTVLDLW 570 LS WWL L+ T V YLS + ++ A+P NY+D PP +R N ++ ++L + S H + ++ ++Y I HF + V + + L +G + + + + ++ DL+YL +M+ +E E +G T A + ++PISGLI+SKL R+ENE TVL W Sbjct: 44 LSSWWLDLIETGVDHYLSSNQTFTDEGGRHIVYDTHAVPYNYIDQPPKSMEAIRHNHYIVQKLLSFSTLPVTETSSPQHVEFDRFLRGTSKEVYTHINHF----------------------ETVSNGVLDLIRG-------NMIRVDQEKTQHLLADLNYLSEMKRLEDERFSGEKTSAGLSHIVPISGLILSKLHRIENELATVLRHW 224
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: A0A7S4KPN3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KPN3_9EUKA) HSP 1 Score: 69.7 bits (169), Expect = 8.300e-11 Identity = 56/196 (28.57%), Postives = 93/196 (47.45%), Query Frame = 1 Query: 10 WWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGRILKSGQ-----SGHDHFKLKVLIKDICNKIYPKITHFMADLKICILQLLELDELDKFVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGEAGFMTKA----RMDVIPISGLIVSKLCRLENEARTVLDLW 570 WWL L+ V+ +L G++ A+P +Y P D V NL +L + K Q H + +I+ I ++ P IT F+ ++ + L+L + + +++L K K D A + + ++KD+ YL +M E+E +T A + V+PISG+IV K R ENE TV+ +W Sbjct: 2 WWLGLIEQEVENFLVSLGYDVSAVPYDYTIEEPRDVDKVADNLKILKQQFKYLQPEFMNDKEKHQPVHKMIEAIKEEVTPTITGFIRSSRVVVSFYLDLPVDEN---PPISRLLEELEKKK-----DKFDAVLWEMVEDLIKDVEYLEEMLELEENP--VTSADGGLTLGVVPISGIIVGKFYRYENEILTVIQIW 187
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Match: A0A7S4UI56_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UI56_9EUKA) HSP 1 Score: 69.3 bits (168), Expect = 1.980e-10 Identity = 49/196 (25.00%), Postives = 93/196 (47.45%), Query Frame = 1 Query: 10 WWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGRILKSGQSGHDHFKLKVLIKDICNKIYPKITHFMADLKICILQLLELDELDKFVFKDVKSAIKKLPKGKRCCHSDTCVAQVKHQLRGMMKDLSYLVDMQEIEGEA-----GFMTKARMD---VIPISGLIVSKLCRLENEARTVLDLWE 573 WWL + RV YL+ G++HDA+PDNYL P D + V +N +L ++L + G + ++ L++ +C ++Y + +++ LLE + + ++ S + G+ + +D YLV M+E++ E K +M+ V+P++GL++++ L E T + WE Sbjct: 298 WWLGHIENRVDNYLAEKGYQHDALPDNYLIVKPTDLSAVYQNQQMLHKLLND-EEGEEEAGIEELVEVVCEEVYEVVDPLKDEIQF----LLEKRWVGLPLRVEMTSELDLGEGGRE---------------EALKRDFEYLVQMKEMDKEIERRRDSGKEKRKMEMSHVVPVAGLVMARFHVLLCELNTAIGHWE 473 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85233.19865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85233.19865.1 >prot_M-pyrifera_M_contig85233.19865.1 ID=prot_M-pyrifera_M_contig85233.19865.1|Name=mRNA_M-pyrifera_M_contig85233.19865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp LSVWWLQLVTTRVKEYLSCSGFEHDAIPDNYLDCPPADTAIVRKNLILLGback to top mRNA from alignment at M-pyrifera_M_contig85233:1..599+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85233.19865.1 ID=mRNA_M-pyrifera_M_contig85233.19865.1|Name=mRNA_M-pyrifera_M_contig85233.19865.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=599bp|location=Sequence derived from alignment at M-pyrifera_M_contig85233:1..599+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85233:1..599+ >mRNA_M-pyrifera_M_contig85233.19865.1 ID=mRNA_M-pyrifera_M_contig85233.19865.1|Name=mRNA_M-pyrifera_M_contig85233.19865.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig85233:1..599+ (Macrocystis pyrifera P11B4 male)back to top |