mRNA_M-pyrifera_M_contig85169.19851.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85169.19851.1
Unique NamemRNA_M-pyrifera_M_contig85169.19851.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A7K1Z8E9_9ACTN (PD-(D/E)XK nuclease family protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z8E9_9ACTN)

HSP 1 Score: 431 bits (1107), Expect = 3.830e-150
Identity = 206/270 (76.30%), Postives = 226/270 (83.70%), Query Frame = 1
Query:   10 VPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKRNKAKAAEDAALLS 819
            +P PPPRLSPSGAGTF QCPRRW+ RY+DRL DPPGE ALAGSFAHRVLELL+QR    RT+D A+ IAR EWPETEA  DY AL +++ + RRFRWKAW AIEGLW LEDP  V V ATEQD+EAELGGVPFRGIVDR+E EGDGL+VTDYKSGKAPSPRFRR RLDQVLLYAAAVEA TGEMPVRARLLYLGQR +G+DV R+EIE VTEKL+DTWA I  AC  DEFEPRTGPLCGWCPYV  C +GTA VAKR   KAA +A LL+
Sbjct:   34 IPVPPPRLSPSGAGTFTQCPRRWKFRYIDRLEDPPGEDALAGSFAHRVLELLLQRQPEQRTIDEARLIARTEWPETEALSDYQALEHNEKESRRFRWKAWTAIEGLWDLEDPAEVKVRATEQDVEAELGGVPFRGIVDRIEEEGDGLIVTDYKSGKAPSPRFRRSRLDQVLLYAAAVEASTGEMPVRARLLYLGQRTIGMDVNREEIETVTEKLSDTWANINTACADDEFEPRTGPLCGWCPYVSMCPQGTAEVAKRANRKAAREAELLA 303          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A354B6R0_9ACTN (PDDEXK_1 domain-containing protein n=8 Tax=Actinobacteria TaxID=201174 RepID=A0A354B6R0_9ACTN)

HSP 1 Score: 422 bits (1086), Expect = 3.170e-147
Identity = 208/271 (76.75%), Postives = 224/271 (82.66%), Query Frame = 1
Query:    1 EVGVPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKRNKAKAAEDAAL 813
            E  VPTPP RLSPSGAGTFEQCPRRWR RYV+RLPDPPGEAALAGSFAHRVLELLMQR    RTV+ AKAIAR EWP  EA  D+ ALG+D+   + FRWKAWQAIEGLW LEDP  VDV ATE D+EA+LGGVPFRGIVDRL+ EGDGLVVTDYKSGKAPS RFRR RLDQVLLYAAAVE  TGEMPV ARLLYLGQRPVGI VTR+EI+ V +KLA TWA I  AC+ DEF+PRTGPLCGWCPYVD C EGT  VAKR   K A+ AA+
Sbjct:    9 ERAVPTPPRRLSPSGAGTFEQCPRRWRLRYVERLPDPPGEAALAGSFAHRVLELLMQRDPHERTVEIAKAIARAEWPGVEADPDFRALGFDETGSKHFRWKAWQAIEGLWALEDPKAVDVRATEHDVEADLGGVPFRGIVDRLDEEGDGLVVTDYKSGKAPSARFRRGRLDQVLLYAAAVEQATGEMPVHARLLYLGQRPVGIKVTREEIDSVVDKLAGTWAAINTACDTDEFDPRTGPLCGWCPYVDRCPEGTKEVAKRQAKKDADVAAM 279          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A7X5WQV7_9ACTN (DUF2800 domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WQV7_9ACTN)

HSP 1 Score: 379 bits (974), Expect = 4.060e-131
Identity = 184/221 (83.26%), Postives = 195/221 (88.24%), Query Frame = 1
Query:    1 EVGVPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTW 663
            + GVP PPPRLSPSGA TFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQ P A RT D A+ IA  EWPETE++DDY ALG+D D GRRF+W+AWQAIEGLWKLEDP TV+V ATE D+EAEL GVPFRGIVDRLE EGDGLVVTDYKSGKAPS RFRR RLDQVLLYAAAVEA  GEMPVRARLLYLGQRPVGIDVTR E++ VTEKLA TW
Sbjct:    6 DTGVPVPPPRLSPSGASTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQCPPAERTPDTAREIAGREWPETESSDDYRALGHDADGGRRFKWRAWQAIEGLWKLEDPSTVEVRATEHDVEAELAGVPFRGIVDRLEEEGDGLVVTDYKSGKAPSARFRRGRLDQVLLYAAAVEAAVGEMPVRARLLYLGQRPVGIDVTRTELDTVTEKLAATW 226          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A7K2AQE0_9ACTN (PD-(D/E)XK nuclease family protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2AQE0_9ACTN)

HSP 1 Score: 353 bits (907), Expect = 7.090e-120
Identity = 172/274 (62.77%), Postives = 203/274 (74.09%), Query Frame = 1
Query:    7 GVPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKRNKAKAAEDAALLSAAG 828
            G P+PP RLSPSGA TFEQCPRRWR RYVDRLPDPPGE AL G+FAHRVLE LMQR    RT D A+ IARE WPE   +DDY  L  DD++   FRW+AW+AIEGLWKLEDP  VDV ATEQ +   L GVPFRG+VDR+E E DGLV++DYKSG+AP+PR+   RL QVLLYAAAV A+TGE PVRA+LLYLGQ+ V   VT  E+E   E+L  TW  I  AC  D+F  + GPLCG+CPYV+ C EG A   +R++ +AAE+ +LL  AG
Sbjct:   23 GRPSPPERLSPSGAATFEQCPRRWRFRYVDRLPDPPGEDALVGTFAHRVLEHLMQRHPGRRTKDDARRIARESWPEMSGSDDYRDLELDDEEAFEFRWRAWRAIEGLWKLEDPSGVDVQATEQHLSVTLDGVPFRGVVDRVESEPDGLVISDYKSGRAPTPRYAPSRLQQVLLYAAAVAAETGEQPVRAQLLYLGQKIVATAVTPVELEDTVEQLKSTWGAIGDACNADDFSAQPGPLCGYCPYVERCPEGQAENRRRSEMRAAEEESLLKLAG 296          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A3M2H6K0_ACTSX (PD-(D/E)XK nuclease family protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H6K0_ACTSX)

HSP 1 Score: 349 bits (896), Expect = 1.990e-118
Identity = 172/273 (63.00%), Postives = 203/273 (74.36%), Query Frame = 1
Query:    1 EVGVPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKRNKAKAAEDAALLS 819
            E   P PPP LSPSGA TFEQCPRRWR RYVDRLPDPPG  ALAG+FAHRVLELL    AA RTV+ A+ +AR  WPE   +DD+AAL  D D  R F+W+AW AIEGLW +E+P TV+V ATE  ++  +GGVPFRG++DR++ E DGLVVTDYKSG+APS RF   RL QVLLYAAA+EA++G  PVRARLLYLGQR V   VTR  ++  +E L  TW  I  +CE DEF  R GPLCGWC YVD C EG+AAVA+R   + AE+AALL+
Sbjct:    4 EAPTPEPPPALSPSGASTFEQCPRRWRFRYVDRLPDPPGPDALAGTFAHRVLELLCGEAAADRTVERARVLARMVWPELAESDDFAALDLDADGVRAFKWRAWSAIEGLWDVENPATVEVHATELRVDTVVGGVPFRGVIDRVDVEPDGLVVTDYKSGRAPSARFAPARLTQVLLYAAALEAESGTRPVRARLLYLGQRSVDTTVTRDTLDEASEGLRRTWDDIRRSCEVDEFPARPGPLCGWCAYVDRCPEGSAAVAERQARREAEEAALLA 276          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A6N8Y9A6_9ACTN (PD-(D/E)XK nuclease family protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8Y9A6_9ACTN)

HSP 1 Score: 338 bits (868), Expect = 5.970e-114
Identity = 166/276 (60.14%), Postives = 197/276 (71.38%), Query Frame = 1
Query:    1 EVGVPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKRNKAKAAEDAALLSAAG 828
            E G P+PP RLSPSGA TFEQCPRRWR RYVDRLPDPPG  AL G+FAHRVLE LMQ+    RT D A+ IAR  WPE     DY  L  DD+Q + FRW+AW+AIEGLW LEDP  VDV ATEQ +   L GVPFRG+VDR+E E DGLV++DYKSG+AP+ R+   RL QVLLYA+A+  +TGE PVRA+LLYLGQ+ V   VT  E+E   E+L  TW  I  AC  D+F  R GPLCG+CPYV+ C EG A   +R++ +AAED  L+  AG
Sbjct:   21 EDGRPSPPERLSPSGAATFEQCPRRWRFRYVDRLPDPPGVDALIGTFAHRVLEHLMQQHPIRRTKDDARRIARALWPEMSGGQDYLDLELDDEQAKEFRWRAWRAIEGLWHLEDPTGVDVRATEQQVSVTLDGVPFRGVVDRVESEPDGLVISDYKSGRAPTARYAPSRLQQVLLYASAIAEETGEQPVRAQLLYLGQKIVATTVTPVELEGAVEQLKSTWGAIGDACRVDDFSARPGPLCGYCPYVERCPEGQAENRRRSELRAAEDEYLVRLAG 296          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A6B1EG28_9ACTN (PD-(D/E)XK nuclease family protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EG28_9ACTN)

HSP 1 Score: 333 bits (855), Expect = 5.630e-112
Identity = 164/274 (59.85%), Postives = 193/274 (70.44%), Query Frame = 1
Query:    7 GVPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKRNKAKAAEDAALLSAAG 828
            G P PP RLSPSGA TFEQCPRRWR RYV+RLP+PPG  AL G+FAHRVLELLMQR  + R+ D AK +AR  WPE    DDY  L   DD+ R FRW+AW+AIEGLW LEDP  ++V ATE+ +   LG VPFRG+VDRLERE DGLVV+DYKSG+AP+ R    RL QVLLYAAAV   TGE PVRA+LLYLGQR V   VT  EI     +L  TW+ I  AC+ D+F P+ GPLCG+C Y + C EG A   +R + +AAE+  L   AG
Sbjct:   23 GAPAPPQRLSPSGASTFEQCPRRWRFRYVERLPEPPGLEALVGTFAHRVLELLMQREPSRRSQDEAKRVARAVWPELAEGDDYRDLELSDDEAREFRWRAWRAIEGLWHLEDPAAIEVEATEEQVSVTLGDVPFRGVVDRLEREDDGLVVSDYKSGRAPTARHAPERLQQVLLYAAAVAEGTGEQPVRAQLLYLGQRIVATAVTPVEIGDAVGRLQSTWSAIADACDIDDFPPQPGPLCGYCAYAEHCPEGQAENLRRAQQRAAEEEYLERLAG 296          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A6J6ZTP9_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6ZTP9_9ZZZZ)

HSP 1 Score: 326 bits (835), Expect = 1.120e-108
Identity = 161/261 (61.69%), Postives = 186/261 (71.26%), Query Frame = 1
Query:    1 EVGVPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDG-LVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKR 780
            E  VP  P  LSPS A TFEQC RRW+ RY+D LPDPPG AALAG+FAHRVLELL Q PA  RT D AKA+ARE WP+TE    + AL  D+   R FRWK W AIEGLWKLEDP  +DV ATEQ++  ++GGVPFRGI+DRLER  DG L VTDYKSG+APS R+   RL QVLLY+AAV A TGE P RARLLYLGQR + + VT   +E V + L  TW+ +  AC  + FEPR GPLCGWCPY   C EG A + +R
Sbjct:   34 EGRVPGMPRHLSPSSASTFEQCARRWKLRYIDHLPDPPGVAALAGTFAHRVLELLFQHPAGQRTRDRAKALAREAWPDTETDPHFQALDLDEAARREFRWKGWLAIEGLWKLEDPMRIDVVATEQNLLTQVGGVPFRGIIDRLERAPDGTLEVTDYKSGRAPSVRYSDDRLKQVLLYSAAVAAHTGEQPSRARLLYLGQRTIDVAVTPSAVEPVVDALGVTWSHMHDACTTEVFEPRPGPLCGWCPYTAQCPEGQAEIQRR 294          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A7Y2GJW2_9ACTN (PD-(D/E)XK nuclease family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GJW2_9ACTN)

HSP 1 Score: 318 bits (814), Expect = 1.280e-105
Identity = 152/253 (60.08%), Postives = 176/253 (69.57%), Query Frame = 1
Query:   31 LSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKRNKA 789
            LSPS AG +EQC R+W+HRY+DRLPDPPGEAAL G+FAHRVLELL+Q     RT+D AK +ARE WPETE   DY  L   D   RRFRWK W AIEGLW+LE+P  VDVAATEQ ++ EL GVPFRGIVDR++ E DG+V+TDYKSG+AP PR+++ RL QVLLYA AV    G  P RARLLYLGQR +   VT   +    E L  TW  I   C    F P TGPLC WCP+V  C EG A V+ R  A
Sbjct:   36 LSPSSAGMYEQCARKWKHRYLDRLPDPPGEAALVGTFAHRVLELLLQDAPDRRTLDRAKELAREAWPETETDPDYQVLELSDTDARRFRWKGWSAIEGLWRLENPAVVDVAATEQKVDVELNGVPFRGIVDRVDNEPDGVVITDYKSGRAPRPRYQKGRLTQVLLYAGAVGELNGAPPTRARLLYLGQRVIETAVTPDNLGEALEGLKTTWTNIESDCASQTFAPTTGPLCAWCPFVAQCPEGMAEVSNRYNA 288          
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Match: A0A2E6XTH0_9ACTN (PDDEXK_1 domain-containing protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E6XTH0_9ACTN)

HSP 1 Score: 310 bits (793), Expect = 3.120e-102
Identity = 145/253 (57.31%), Postives = 177/253 (69.96%), Query Frame = 1
Query:   31 LSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHRVLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRWKAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGLVVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRPVGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGCAEGTAAVAKRNKA 789
             SPS A T+++CPRRW+HRY+D+LPDPPGEAAL G+F+HRVLELL     + RT+D A+ +AR+ WP      DY AL  + +  R FRWK+W+AIEGLW LEDP  VDV ATEQ + AE+ GVPFRGIVDR++    GL +TDYKSGKAP P  R   L QV LYAAAVEADTGE PV+ RLLYLGQ  +   VT + ++  T  LA +WA +   C    FE R GPLCGWCPYVD C EG + V +R +A
Sbjct:   52 FSPSAASTYDKCPRRWKHRYIDKLPDPPGEAALVGTFSHRVLELLCGEEPSLRTIDRARKLARDVWPSISTHRDYRALDLEPEAEREFRWKSWRAIEGLWGLEDPALVDVRATEQRLTAEVAGVPFRGIVDRMDNSDTGLAITDYKSGKAPRPNRRSEALSQVFLYAAAVEADTGERPVQVRLLYLGQEAIEETVTDEGLDEATGGLASSWASLETDCSSGRFEVRPGPLCGWCPYVDTCQEGRSEVVRRVEA 304          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85169.19851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1Z8E9_9ACTN3.830e-15076.30PD-(D/E)XK nuclease family protein n=2 Tax=Acidimi... [more]
A0A354B6R0_9ACTN3.170e-14776.75PDDEXK_1 domain-containing protein n=8 Tax=Actinob... [more]
A0A7X5WQV7_9ACTN4.060e-13183.26DUF2800 domain-containing protein (Fragment) n=1 T... [more]
A0A7K2AQE0_9ACTN7.090e-12062.77PD-(D/E)XK nuclease family protein n=6 Tax=Acidimi... [more]
A0A3M2H6K0_ACTSX1.990e-11863.00PD-(D/E)XK nuclease family protein n=1 Tax=Actinom... [more]
A0A6N8Y9A6_9ACTN5.970e-11460.14PD-(D/E)XK nuclease family protein n=2 Tax=Acidimi... [more]
A0A6B1EG28_9ACTN5.630e-11259.85PD-(D/E)XK nuclease family protein n=2 Tax=Acidimi... [more]
A0A6J6ZTP9_9ZZZZ1.120e-10861.69Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A7Y2GJW2_9ACTN1.280e-10560.08PD-(D/E)XK nuclease family protein n=1 Tax=Acidimi... [more]
A0A2E6XTH0_9ACTN3.120e-10257.31PDDEXK_1 domain-containing protein n=2 Tax=Actinob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85169contigM-pyrifera_M_contig85169:19..849 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score173.3
Seed ortholog evalue1.6e-40
Seed eggNOG ortholog1229780.BN381_80226
Preferred namerecB
KEGG koko:K07465
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PD-(D/E)XK nuclease superfamily
EggNOG OGs2GJC5@201174,3UWVT@52018,COG2887@1,COG2887@2
COG Functional cat.L
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size831
Cds size831
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816759.9379256-CDS-M-pyrifera_M_contig85169:18..8491622816759.9379256-CDS-M-pyrifera_M_contig85169:18..849Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85169 19..849 -
1692278161.9402614-CDS-M-pyrifera_M_contig85169:18..8491692278161.9402614-CDS-M-pyrifera_M_contig85169:18..849Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85169 19..849 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85169.19851.1prot_M-pyrifera_M_contig85169.19851.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85169 19..849 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85169.19851.1

>prot_M-pyrifera_M_contig85169.19851.1 ID=prot_M-pyrifera_M_contig85169.19851.1|Name=mRNA_M-pyrifera_M_contig85169.19851.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=277bp
EVGVPTPPPRLSPSGAGTFEQCPRRWRHRYVDRLPDPPGEAALAGSFAHR
VLELLMQRPAAARTVDAAKAIAREEWPETEAADDYAALGYDDDQGRRFRW
KAWQAIEGLWKLEDPCTVDVAATEQDIEAELGGVPFRGIVDRLEREGDGL
VVTDYKSGKAPSPRFRRPRLDQVLLYAAAVEADTGEMPVRARLLYLGQRP
VGIDVTRKEIEVVTEKLADTWAGITGACERDEFEPRTGPLCGWCPYVDGC
AEGTAAVAKRNKAKAAEDAALLSAAG*
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mRNA from alignment at M-pyrifera_M_contig85169:19..849-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85169.19851.1 ID=mRNA_M-pyrifera_M_contig85169.19851.1|Name=mRNA_M-pyrifera_M_contig85169.19851.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=831bp|location=Sequence derived from alignment at M-pyrifera_M_contig85169:19..849- (Macrocystis pyrifera P11B4 male)
GAAGTCGGTGTTCCCACCCCACCTCCCCGACTCTCGCCGTCGGGCGCCGG AACCTTCGAGCAGTGTCCTCGTCGTTGGCGTCACCGCTATGTCGACCGCC TCCCCGACCCGCCGGGCGAGGCCGCCCTGGCCGGGAGCTTCGCCCATCGG GTGCTCGAACTCCTGATGCAGCGGCCGGCTGCGGCGCGCACGGTCGATGC CGCCAAGGCCATCGCCCGCGAAGAATGGCCCGAGACCGAGGCCGCCGACG ACTATGCCGCCCTCGGCTACGACGACGACCAGGGTCGCCGGTTCCGTTGG AAGGCGTGGCAGGCCATCGAGGGCCTCTGGAAGCTCGAAGACCCCTGCAC GGTCGATGTCGCGGCAACCGAGCAAGACATCGAGGCGGAGCTCGGCGGAG TGCCTTTCCGAGGCATCGTCGACCGGCTCGAACGCGAGGGCGACGGGCTC GTGGTCACCGACTACAAGTCCGGCAAGGCGCCCTCCCCTCGGTTCCGTCG GCCACGGCTCGATCAGGTCCTGCTCTACGCGGCCGCCGTCGAGGCCGACA CCGGCGAGATGCCGGTGCGGGCCCGCCTGCTCTATCTCGGCCAGCGCCCG GTCGGCATCGACGTCACCCGCAAGGAGATCGAGGTCGTCACCGAGAAGCT GGCCGACACCTGGGCCGGCATCACCGGGGCCTGCGAACGCGACGAGTTCG AGCCCCGCACCGGTCCGCTGTGTGGCTGGTGCCCCTATGTCGACGGTTGT GCCGAGGGCACCGCGGCGGTGGCGAAGCGCAACAAGGCCAAGGCCGCCGA AGACGCCGCGCTGCTCAGCGCAGCGGGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85169:19..849-

>mRNA_M-pyrifera_M_contig85169.19851.1 ID=mRNA_M-pyrifera_M_contig85169.19851.1|Name=mRNA_M-pyrifera_M_contig85169.19851.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1662bp|location=Sequence derived from alignment at M-pyrifera_M_contig85169:19..849- (Macrocystis pyrifera P11B4 male)
GAAGTCGGTGTTCCCACCCCACCTCCCCGACTCTCGCCGTCGGGCGCCGG
AACCTTCGAGCAGTGTCCTCGTCGTTGGCGTCACCGCTATGTCGACCGCC
TCCCCGACCCGCCGGGCGAGGCCGCCCTGGCCGGGAGCTTCGCCCATCGG
GTGCTCGAACTCCTGATGCAGCGGCCGGCTGCGGCGCGCACGGTCGATGC
CGCCAAGGCCATCGCCCGCGAAGAATGGCCCGAGACCGAGGCCGCCGACG
ACTATGCCGCCCTCGGCTACGACGACGACCAGGGTCGCCGGTTCCGTTGG
AAGGCGTGGCAGGCCATCGAGGGCCTCTGGAAGCTCGAAGACCCCTGCAC
GGTCGATGTCGCGGCAACCGAGCAAGACATCGAGGCGGAGCTCGGCGGAG
TGCCTTTCCGAGGCATCGTCGACCGGCTCGAACGCGAGGGCGACGGGCTC
GTGGTCACCGACTACAAGTCCGGCAAGGCGCCCTCCCCTCGGTTCCGTCG
GCCACGGCTCGATCAGGTCCTGCTCTACGCGGCCGCCGTCGAGGCCGACA
CCGGCGAGATGCCGGTGCGGGCCCGCCTGCTCTATCTCGGCCAGCGCCCG
GTCGGCATCGACGTCACCCGCAAGGAGATCGAGGTCGTCACCGAGAAGCT
GGCCGACACCTGGGCCGGCATCACCGGGGCCTGCGAACGCGACGAGTTCG
AGCCCCGCACCGGTCCGCTGTGTGGCTGGTGCCCCTATGTCGACGGTTGT
GCCGAGGGCACCGCGGCGGTGGCGAAGCGCAACAAGGCCAAGGCCGCCGA
AGACGCCGCGCTGCTCAGCGCAGCGGGCTGAGAAGTCGGTGTTCCCACCC
CACCTCCCCGACTCTCGCCGTCGGGCGCCGGAACCTTCGAGCAGTGTCCT
CGTCGTTGGCGTCACCGCTATGTCGACCGCCTCCCCGACCCGCCGGGCGA
GGCCGCCCTGGCCGGGAGCTTCGCCCATCGGGTGCTCGAACTCCTGATGC
AGCGGCCGGCTGCGGCGCGCACGGTCGATGCCGCCAAGGCCATCGCCCGC
GAAGAATGGCCCGAGACCGAGGCCGCCGACGACTATGCCGCCCTCGGCTA
CGACGACGACCAGGGTCGCCGGTTCCGTTGGAAGGCGTGGCAGGCCATCG
AGGGCCTCTGGAAGCTCGAAGACCCCTGCACGGTCGATGTCGCGGCAACC
GAGCAAGACATCGAGGCGGAGCTCGGCGGAGTGCCTTTCCGAGGCATCGT
CGACCGGCTCGAACGCGAGGGCGACGGGCTCGTGGTCACCGACTACAAGT
CCGGCAAGGCGCCCTCCCCTCGGTTCCGTCGGCCACGGCTCGATCAGGTC
CTGCTCTACGCGGCCGCCGTCGAGGCCGACACCGGCGAGATGCCGGTGCG
GGCCCGCCTGCTCTATCTCGGCCAGCGCCCGGTCGGCATCGACGTCACCC
GCAAGGAGATCGAGGTCGTCACCGAGAAGCTGGCCGACACCTGGGCCGGC
ATCACCGGGGCCTGCGAACGCGACGAGTTCGAGCCCCGCACCGGTCCGCT
GTGTGGCTGGTGCCCCTATGTCGACGGTTGTGCCGAGGGCACCGCGGCGG
TGGCGAAGCGCAACAAGGCCAAGGCCGCCGAAGACGCCGCGCTGCTCAGC
GCAGCGGGCTGA
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