mRNA_M-pyrifera_M_contig85109.19840.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: M5RX43_9BACT (Uncharacterized protein n=4 Tax=Rhodopirellula TaxID=265488 RepID=M5RX43_9BACT) HSP 1 Score: 115 bits (287), Expect = 3.750e-29 Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 1 Query: 1 MATRWIKLDSQTEKRLRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAAGRVRRPGAGREK 258 MA + DSQTE+RLR F TL E+DRRRFAAI+ATQ GHGGI + VL ISTRTIE GIAELD L+DD AAGRVRRPGAGR+K Sbjct: 1 MAISLREADSQTEQRLRDFAGTLSEKDRRRFAAIEATQRGHGGITYIAGVLRISTRTIERGIAELDHLKDDPAAGRVRRPGAGRKK 86
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: A0A5C6F5X3_9BACT (Uncharacterized protein n=2 Tax=Rubripirellula tenax TaxID=2528015 RepID=A0A5C6F5X3_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 1.430e-20 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 37 EKRLRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAAGRVRRPGAGREK 258 E+ LR F TL E+DRRRFAA++A Q GHGGI + V+ S +TIE G+AELD L DD AAGR+R+PGAGR+K Sbjct: 10 ERSLREFAATLTEKDRRRFAAVEAKQRGHGGIRYIARVIGCSEKTIERGLAELDSLTDDPAAGRIRQPGAGRKK 83
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: A0A257W6I1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium 12-60-4 TaxID=1970541 RepID=A0A257W6I1_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 1.550e-19 Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 46 LRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAAGRVRRPGAGREK 258 +R F +L E+DRRRFAA++A+Q GHGGI + V+ S +TIE G+AELD L DD AGRVRRPGAGR+K Sbjct: 1 MRDFAASLSEKDRRRFAAVEASQRGHGGIRYIAKVIGCSEKTIERGLAELDQLADDPVAGRVRRPGAGRKK 71
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: A0A5C5V8A8_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula retiformator TaxID=2527970 RepID=A0A5C5V8A8_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 2.410e-19 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 19 KLDSQTEKRLRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAAGRVRRPGAGREKNDPET 273 +LD+ TE+R + + TL E+D+RRFAA++A +LGHGGI + +L +S TIE GI E+ L +D AAGR+RRPG GR+K T Sbjct: 8 QLDAATEQRSQAYFATLSEKDQRRFAALEAQRLGHGGIGYIARLLGVSRSTIERGIREMAQLPEDPAAGRIRRPGGGRKKESTPT 92
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: A0A3B0RDS1_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0RDS1_9ZZZZ) HSP 1 Score: 89.0 bits (219), Expect = 3.600e-19 Identity = 41/79 (51.90%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 25 DSQTEKRLRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAAGRVRRPGAGREKN 261 D E+R+R F +L E+DRRR+AA++A++LGHGGI + +V+ S TI+ G ELD L++D A GR+RRPGAGR+K+ Sbjct: 10 DPIVEERMRSFAASLSEKDRRRYAALEASKLGHGGILYITEVIGCSRSTIDRGTLELDHLDEDPAEGRIRRPGAGRKKS 88
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: M5S8D7_9BACT (Transposase, Rhodopirellula-type n=7 Tax=Pirellulaceae TaxID=2691357 RepID=M5S8D7_9BACT) HSP 1 Score: 94.0 bits (232), Expect = 4.310e-19 Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 3 Query: 444 IRRWQIRSDVPGSGHPDQNRQLERIAELVSIREFSGSPWFSNETKAKEHLGLLYR*DWVRGKHSF 638 IRR QIR D+PG HPD++RQ ERIAELVS E +G PWFS +TKAKEHLGLLYR VRG SF Sbjct: 31 IRRRQIRKDIPGGEHPDRDRQFERIAELVSQYETAGEPWFSIDTKAKEHLGLLYRKGRVRGNRSF 95
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: A0A1Q8BKS2_9CYAN (Uncharacterized protein (Fragment) n=1 Tax=Cyanobacteria bacterium 13_1_20CM_4_61_6 TaxID=1805100 RepID=A0A1Q8BKS2_9CYAN) HSP 1 Score: 93.2 bits (230), Expect = 1.420e-18 Identity = 77/257 (29.96%), Postives = 116/257 (45.14%), Query Frame = 1 Query: 31 QTEKRLRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAAGRVRRPGAGREKNDPETPEENNWIQ-CLAV*AVGAPGEEDIAHTGLSPQVHSERSSKAGTPVGQDAAVDWLNEAKFVGGRSAATFPAADTRTRTASLNALPSWFQSANSAAVPGFRTKPKRKSTLVFSIAKTGFEANIRSRLPLVGRWRDHTARD--------RWSKSEFGSHQPLSLACTSEFACDSLRRFW 774 + E+ LR + +L E+DRRRFAA++A +LGHGG + VL +TI+ G+ EL L DD A RVR+PG GR+K + + E +Q + G P D+ T ++PQ ++R V L+ F + A P D+ R A + Q A P K+K L ++ + G + + +P+ AR +++ H LS T+ FACDSLR FW Sbjct: 12 EIEQLLRQYYQSLSEKDRRRFAAVEAIRLGHGGTRYIATVLGCDPQTIQEGMRELKQLPDDPAGHRVRKPGGGRKKTEDKHAELIQQVQHTIQDRTAGDPMRADVVWTDVTPQEIADRLQAQAVSVSPRIVRRILDTLGFARRQMAKVLPGGDSPQRDAQFRHVSHLIQEFLEAGNPILSIDTKKKEVLG-TLYRDG-KVYCQQAIPVFDHDFPSLARGVIIPHGIYDLAQNHGWIHLGLSHDTTA-FACDSLRLFW 265
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: A0A5C6CX76_9BACT (Uncharacterized protein n=2 Tax=Novipirellula artificiosorum TaxID=2528016 RepID=A0A5C6CX76_9BACT) HSP 1 Score: 85.5 bits (210), Expect = 1.710e-17 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 19 KLDSQTEKRLRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAAGRVRRPGAGREK 258 +LD E+R + + TL E+D+RRFAA++A +LGHGGI V +L +S TIE GI E++ D AAGRVRRPG GR+K Sbjct: 28 QLDKAAEQRSQAYFATLSEKDQRRFAALEAQRLGHGGIIYVAKLLGVSRSTIERGIREIEQFPVDPAAGRVRRPGGGRKK 107
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: UPI001F0DE6E7 (ISAzo13 family transposase n=1 Tax=Thiorhodococcus mannitoliphagus TaxID=329406 RepID=UPI001F0DE6E7) HSP 1 Score: 89.7 bits (221), Expect = 3.950e-17 Identity = 60/194 (30.93%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 46 LRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAA------GRVRRPGAGREKN---DPETPEENNWIQCLAV*AVGAPGEEDIAHTGLSPQVHSERSSKAGTPVGQDAAVDWLNEAKFVGG--RSAATFPAADTRTRTASLNALPSWFQSANSAAVPGFRTKPKRKSTL 594 +R + +LPE+ RRR+AA++A ++G+GG++ V VL +S T+ SG++EL+ +DD RVRRPGAGR D E E+ + + L V + G+P +E + T L+P +++ + G + ++ A WL++A F R D + R A + + + A +P F K+K L Sbjct: 1 MRRYSRSLPEDHRRRYAALEAEKIGYGGVSYVARVLGMSRATVHSGLSELEQFDDDNPQRPSGKPDRVRRPGAGRPPRLEVDAEAQEQLDEV--LEVHSAGSPTDEHVRWTDLNPGRLAQQMLERGITISRNTAAAWLDQAGFRRRALRKELITGVVDPQERDAQFRYIAALRRQAQHKGIPVFSVDTKKKELL 192
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Match: A0A3M1BEC6_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1BEC6_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 6.840e-17 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 46 LRGFLTTLPEEDRRRFAAIDATQLGHGGIA*VVDVLSISTRTIESGIAELDCLEDDTAAGRVRRPGAGREKNDPETPEEN 285 +R F +L E+DRRRF AI+A + G GG++ + V+ S T+E G AELD L++D AAGRVRRPGAGR+K +P+ N Sbjct: 1 MRDFADSLSEKDRRRFVAIEAERHGVGGVSWICRVVGCSAHTVERGRAELDSLDNDPAAGRVRRPGAGRKKRSNRSPKPN 80 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85109.19840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85109.19840.1 >prot_M-pyrifera_M_contig85109.19840.1 ID=prot_M-pyrifera_M_contig85109.19840.1|Name=mRNA_M-pyrifera_M_contig85109.19840.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp MATRWIKLDSQTEKRLRGFLTTLPEEDRRRFAAIDATQLGHGGIA*back to top mRNA from alignment at M-pyrifera_M_contig85109:94..867+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85109.19840.1 ID=mRNA_M-pyrifera_M_contig85109.19840.1|Name=mRNA_M-pyrifera_M_contig85109.19840.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig85109:94..867+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85109:94..867+ >mRNA_M-pyrifera_M_contig85109.19840.1 ID=mRNA_M-pyrifera_M_contig85109.19840.1|Name=mRNA_M-pyrifera_M_contig85109.19840.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig85109:94..867+ (Macrocystis pyrifera P11B4 male)back to top |