mRNA_M-pyrifera_M_contig85097.19833.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: A0A7V8V1G7_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V1G7_9BACT) HSP 1 Score: 120 bits (300), Expect = 7.140e-31 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 Query: 1 MTSNISLSKLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG 207 MTSNISL+KLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG Sbjct: 1 MTSNISLTKLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG 69
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: UPI001CCC6F05 (DUF1559 domain-containing protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCC6F05) HSP 1 Score: 112 bits (281), Expect = 4.070e-28 Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 1 Query: 1 MTSNISLSKLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG 207 MT IS SK RQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG Sbjct: 1 MTHTISFSKPRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG 69
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: A0A2S8FY63_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FY63_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 3.780e-17 Identity = 51/69 (73.91%), Postives = 53/69 (76.81%), Query Frame = 1 Query: 1 MTSNISLSKLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG 207 MT+N L+K R FTLVELLVVIAIIGI XX RASARRMECQSNLKQIGIGMVNFA IDKG Sbjct: 1 MTTNQLLAKPRLAFTLVELLVVIAIIGIXXXXXXXXXXXXRASARRMECQSNLKQIGIGMVNFASIDKG 69
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: UPI0011614327 (DUF1559 domain-containing protein n=1 Tax=Singulisphaera sp. GP187 TaxID=1882752 RepID=UPI0011614327) HSP 1 Score: 78.2 bits (191), Expect = 1.010e-15 Identity = 38/56 (67.86%), Postives = 51/56 (91.07%), Query Frame = 1 Query: 22 SKLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNF 189 S+LR GFTL+ELLVVIAIIG+LV +LPAV++ARA+ARR +CQSNL+Q+G+G++ F Sbjct: 3 SRLRAGFTLIELLVVIAIIGVLVGLMLPAVSSARAAARRAKCQSNLRQVGLGLLGF 58
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: A0A3L7PSU1_9BACT (Type II secretion system protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PSU1_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 1.330e-15 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 31 RQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG 207 + GFTLVELLVVIAIIG L+ ++PAV +ARA+ARR++C SN++Q+GIG++NFA +G Sbjct: 5 QSGFTLVELLVVIAIIGTLIGLLIPAVQSARAAARRVQCASNMRQVGIGILNFADTHQG 63
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: L0DPH0_SINAD (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=2 Tax=Singulisphaera acidiphila TaxID=466153 RepID=L0DPH0_SINAD) HSP 1 Score: 77.8 bits (190), Expect = 3.470e-15 Identity = 38/56 (67.86%), Postives = 51/56 (91.07%), Query Frame = 1 Query: 22 SKLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNF 189 S+LR GFTL+ELLVVIAIIG+LV +LPAV++ARA+ARR +CQSNL+Q+G+G++ F Sbjct: 19 SRLRVGFTLIELLVVIAIIGVLVGLMLPAVSSARAAARRAKCQSNLRQVGLGLLGF 74
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: A0A2S8FX74_9BACT (Prepilin-type cleavage/methylation domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8FX74_9BACT) HSP 1 Score: 76.6 bits (187), Expect = 5.230e-15 Identity = 40/55 (72.73%), Postives = 47/55 (85.45%), Query Frame = 1 Query: 25 KLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNF 189 LR+GFTLVELLVVIAIIGIL+ +LPAV AR +ARRM+CQ+NLKQIG+G NF Sbjct: 2 SLRKGFTLVELLVVIAIIGILIAMLLPAVQQAREAARRMQCQNNLKQIGLGFHNF 56
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: A0A518C2B8_9BACT (Uncharacterized protein n=2 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C2B8_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 6.740e-15 Identity = 48/69 (69.57%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 1 MTSNISLSKLRQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDKG 207 MTSN L+K R FTLVELLVVIAIIG XX RRMECQSNLKQIGIGMVNFAGIDKG Sbjct: 39 MTSNHLLAKPRPAFTLVELLVVIAIIGXXXXXXXXXXXXXXXXXRRMECQSNLKQIGIGMVNFAGIDKG 107
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: A0A2S8G0C1_9BACT (Prepilin-type cleavage/methylation domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8G0C1_9BACT) HSP 1 Score: 76.3 bits (186), Expect = 7.380e-15 Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 1 Query: 31 RQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAG 195 R+GFTLVELLVVIAIIG+L+ +LPAV AR SARRM+CQ+NLKQIG+ M N+ G Sbjct: 4 RRGFTLVELLVVIAIIGVLISLLLPAVQQARESARRMQCQNNLKQIGLAMQNYHG 58
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Match: A0A2G2JBJ9_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2JBJ9_9BACT) HSP 1 Score: 76.3 bits (186), Expect = 9.280e-15 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1 Query: 31 RQGFTLVELLVVIAIIGILVXXVLPAVATARASARRMECQSNLKQIGIGMVNFAGIDK 204 R GFTLVELLVVIAIIGILV LPAV AR SARR +CQ+NLK +G+G++NF G K Sbjct: 16 RSGFTLVELLVVIAIIGILVGLTLPAVQMARESARRAQCQNNLKNLGLGLLNFEGTHK 73 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85097.19833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85097.19833.1 >prot_M-pyrifera_M_contig85097.19833.1 ID=prot_M-pyrifera_M_contig85097.19833.1|Name=mRNA_M-pyrifera_M_contig85097.19833.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=69bp MTSNISLSKLRQGFTLVELLVVIAIIGILVGLVLPAVATARASARRMECQback to top mRNA from alignment at M-pyrifera_M_contig85097:662..868+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85097.19833.1 ID=mRNA_M-pyrifera_M_contig85097.19833.1|Name=mRNA_M-pyrifera_M_contig85097.19833.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=207bp|location=Sequence derived from alignment at M-pyrifera_M_contig85097:662..868+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85097:662..868+ >mRNA_M-pyrifera_M_contig85097.19833.1 ID=mRNA_M-pyrifera_M_contig85097.19833.1|Name=mRNA_M-pyrifera_M_contig85097.19833.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig85097:662..868+ (Macrocystis pyrifera P11B4 male)back to top |