mRNA_M-pyrifera_M_contig85096.19832.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85096.19832.1
Unique NamemRNA_M-pyrifera_M_contig85096.19832.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A7V3I7B5_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3I7B5_9BACT)

HSP 1 Score: 141 bits (355), Expect = 1.210e-35
Identity = 96/229 (41.92%), Postives = 126/229 (55.02%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQ---AWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGA------RMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQ--LDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAAR 654
            +LKV+LA  +P  LL APR   R+ + LA  AGVS  S  R+++ LE D ++  G   L LVRI  LL    AWR   Q    +WLV+      DP     +AL     + A+ VG   A      R+CLG FAA+ ALG GFV G P H+Y E   P + ++  L +   EH  +A   +  P  PE+VFR  V ++GVP AD LQ W+DVS H +RG+ QA EIA R
Sbjct:  164 MLKVLLAESIPVNLLSAPRARYRNPTELARAAGVSVMSAFRLVRQLENDGFVDPGEESLELVRIPELLSRWSAWREPIQEFPVRWLVKR-----DPA--AVAALLSSYSAGAASVGDSAAERRRRPRVCLGLFAAADALGFGFVHGVPPHIYMERFDPGVLQRFGLSVEGAEHSPDA--FIRIPPNPEAVFRAAVIKDGVPCADVLQVWLDVSDHPSRGKAQADEIARR 383          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9AEK4_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9AEK4_9BACT)

HSP 1 Score: 136 bits (342), Expect = 3.780e-35
Identity = 92/224 (41.07%), Postives = 124/224 (55.36%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVA-VEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWS 663
            +LKV+LA  +P   L APRG  + AS LAE AGVS  S  R ++    + +L  G   LRLVR+  LL  W  ++Q  + +  +R  L  G     + V S  +  A + A  +     R+CLG FAA+ ALG+GFV G   +LY E    A+ + L L    E  +EA+  V  P   ES FRG V ++GVPV+D LQ W+DVS H +RG+EQA  I  RI S
Sbjct:   16 MLKVLLAPRIPEVYLSAPRGRYQGASQLAEAAGVSVMSAFRFVEEFSKEGFLEPGGGVLRLVRVRELLNRWVAASQPRILEIPMRWVLHRGKKALWNAVRSYQSDEAIASADQLSSPRPRLCLGLFAAAEALGIGFVHGVKPYLYLERLNAAVLKDLGLSGNAEEEEEADLYVRIPGNRESAFRGVVRKDGVPVSDILQVWLDVSQHPSRGKEQADLIWRRILS 239          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9GCF2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9GCF2_9BACT)

HSP 1 Score: 135 bits (339), Expect = 8.570e-34
Identity = 93/226 (41.15%), Postives = 125/226 (55.31%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRARSHASPVGPEGA---RMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWS 663
            +LKV+LA  +P   L APRG    AS LAE AGVS  S  R ++    + +L  G   L+LVR+  LL  W  ++QR + +  +R  L  G       V S  +  A S A+PV    +   R+CLG F A+ ALG+GFV GA  +LY E     + + L L      + A+  V  P   ESVFRG V+++GVPV+D LQ W+DVS H +RG+EQA  I  RI S
Sbjct:  104 MLKVLLAPRIPDVYLSAPRGHYHGASQLAEAAGVSVMSAFRFVEEFSKESFLESGTGVLQLVRLRELLNRWVAASQRRVLEIPMRWVLQRGKKALWSAVGSYQSDEAMSSANPVDQLSSPRPRLCLGLFEAAEALGIGFVHGAKPYLYLERLNAEVLKDLGLSGNAEEEIADLYVRIPRNRESVFRGVVQKDGVPVSDILQVWLDVSQHPSRGKEQADLIWRRILS 329          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A3D5SMC2_9BACT (RpiR family transcriptional regulator (Fragment) n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A3D5SMC2_9BACT)

HSP 1 Score: 130 bits (328), Expect = 6.110e-32
Identity = 89/220 (40.45%), Postives = 119/220 (54.09%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 657
            +LKV+LA +VP ELL APRG+ R+AS LA  A VS  S  R ++ L+ + YL      L LVR E L + W+ SA R L++  +R  L G DP   +   L                R CL  FAA+ AL LGFV G P ++Y E   P+       +    P E+  +++R A  P+SVFRG V  NG+  +D LQ W+DVS H +RG EQA  I  R+
Sbjct:  153 MLKVLLAPEVPEELLSAPRGQYRNASQLARAAKVSVMSAFRFVQQLQDEGYLSESNPYLSLVRREDLFRRWQASAVRSLKEVPMRYLLKG-DPRAQLRKMLGS-------------GRACLALFAAADALKLGFVEGVPPYVYVERIQPSNLSVWKNLRRCGPSESPELILRQAPAPQSVFRGLVRPNGMATSDVLQVWVDVSSHPSRGREQADLIRKRV 358          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: Q01P64_SOLUE (Uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) TaxID=234267 RepID=Q01P64_SOLUE)

HSP 1 Score: 131 bits (329), Expect = 8.190e-32
Identity = 86/233 (36.91%), Postives = 122/233 (52.36%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQ-----WLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGAR---------MCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 657
            +LK++L + +P  LL  PR  +R+ S LA++A VS  S SR++K L  + Y+      L +VR + LL  W  SA RP  +     W+++      D    + S     A S   P      R          C+G FAA+ ALGLGFVRG P +LY E   P L ++L L   +  +  +  +  P+  ES+FR  V R+G+PV+D LQ W+D S H ARG EQ+ EI  RI
Sbjct:  168 MLKILLGQHLPESLLSIPRERIRNTSQLADVARVSMMSASRLVKQLITEGYIDEHEDHLHVVRADDLLDRWI-SANRPRSRDVPAHWIIKK-----DERQFLASVGQYAAESRTDPKPKSRVRNRLVKAQPRCCIGLFAAADALGLGFVRGVPPYLYLEGLDPNLLQRLGLSIEDSGRRPDVYIRVPSNKESIFRAAVIRDGLPVSDVLQVWLDTSTHPARGREQSDEIRRRI 394          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9FI27_9BACT (Uncharacterized protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9FI27_9BACT)

HSP 1 Score: 130 bits (327), Expect = 1.610e-31
Identity = 86/225 (38.22%), Postives = 127/225 (56.44%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRAR----SHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 657
            +LKV+LA  +P   L APRG+ + AS LA  AGVS  S  R ++    + +L  G   LRLVR   L+  WR ++QR + +  ++  L  G+      + S L++ ++    S+  P  P   R+CL  F A+ ALG+GFVRGA  ++Y E     + + L L      ++A+  V  P   ESVFRG VE++G+PV+D +Q W+DV  H ARG+EQA  I  +I
Sbjct:  171 MLKVLLAPRIPESYLSAPRGQYQGASQLAAAAGVSVMSGFRFIEEFSKEGFLESGQGPLRLVRWRELMNRWRAASQRRVVEVPMQWVLHKGEKALRSALRSYLSKESKPSRDSNEHPPSPR-PRICLALFEAAEALGIGFVRGAKPYIYVERLNGDVLKDLGLSENAEEQDADIYVRLPGNRESVFRGVVEKSGLPVSDIIQVWLDVGQHPARGKEQADIIWRKI 394          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A6P1J280_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. BPS33 TaxID=2651974 RepID=A0A6P1J280_9BURK)

HSP 1 Score: 127 bits (320), Expect = 1.250e-30
Identity = 85/217 (39.17%), Postives = 118/217 (54.38%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQ-LDLVAVEHPKEAEWIVVRPAF-PESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEI 645
            +LKV+LA D+P ELL APRG   S +ALAE A VS+ S SR LKAL  + +L    + + LVR E L   WR +  R   +  +R S         + S   ++       +G +  + CLG FAA+  LGLG V G P ++ C A LP L    + +  V +P+     ++R    P+S FRG V R+G   AD +Q W+DVS H +RG+EQA  I
Sbjct:  171 MLKVLLAPDIPPELLHAPRGRYDSGAALAEAALVSNMSASRFLKALRREKFLDESKNHIALVRREELFMRWRAAGLRSCPEIPMRIS---------IRSTAQQQIHRF---IGEQNGQACLGLFAAADGLGLGHVSGVPPYI-CVAKLPQLGSPGIAVPMVAYPEGVPDFILRQTLSPQSTFRGAVRRDGTAYADVIQTWLDVSNHPSRGQEQADHI 374          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A446C646_9BURK (Uncharacterized protein n=2 Tax=Achromobacter veterisilvae TaxID=2069367 RepID=A0A446C646_9BURK)

HSP 1 Score: 127 bits (318), Expect = 2.090e-30
Identity = 88/222 (39.64%), Postives = 122/222 (54.95%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQR-----PLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYC-EAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEI 645
            +LK++LAR++P  LL APR + R+ S LAE A VS+ S SR L+ L ++ YL   +  L+LVR EAL + W  +  R     P    L  P LP    L   H+  A                 CLG FAA+  L +G V G P ++Y  + P P   +  +L+A  HP E   +++R A FP+S FRG ++RNGV V+D +Q W+DV  H ARG EQA+ I
Sbjct:  166 MLKLLLARELPEGLLNAPRKKFRNGSELAEAARVSAMSASRFLQQLRSEGYLSDSSPYLKLVRREALFRRWSAATMRSCPEMPCRFLLRMPVLPQIQGLLGGHTEDA-----------------CLGLFAAADELDIGHVSGVPPYVYVHKLPRPGSPDWPELIA--HPSERPDLILRQAVFPQSTFRGAIDRNGVMVSDVIQIWLDVMHHPARGAEQATLI 368          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: UPI001E3B0505 (hypothetical protein n=1 Tax=Luteimonas sp. XNQY3 TaxID=2878686 RepID=UPI001E3B0505)

HSP 1 Score: 126 bits (316), Expect = 4.120e-30
Identity = 82/223 (36.77%), Postives = 120/223 (53.81%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWSE 666
            +LKV+LA ++PA LL APRGE R  S LA  A VS+ S SR ++ L+ + +L      LRLVR   L + W+ +A R   +  +   +PGG          AR+     S +       C+G FAA+  LG+G V G   +LY     P   +    +    P E   +++R A  PES+FRG V+  G+PV+D LQ W+D S H +RG EQAS + +++ S+
Sbjct:  167 MLKVLLAPEIPANLLTAPRGEYRGGSELASAAQVSAMSASRFVRRLQEEGFLDDSGRALRLVRRRELFRRWQSAAMRSSPELPMSFLIPGG----------ARQLNKVVSRL-----EACVGVFAAADMLGIGHVSGVAPYLYVRRLRPPSEDSWPGLVPSPPGEPPQVILRQANAPESLFRGAVQVEGMPVSDVLQIWLDASAHPSRGAEQASLLRSKMLSD 374          
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A5P2HAR0_9BURK (RpiR family transcriptional regulator n=1 Tax=Cupriavidus pauculus TaxID=82633 RepID=A0A5P2HAR0_9BURK)

HSP 1 Score: 125 bits (315), Expect = 5.640e-30
Identity = 88/222 (39.64%), Postives = 118/222 (53.15%), Query Frame = 1
Query:    1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAE---WIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 657
            +LKV+LA ++PA LL APR E +S + LAE A VS  SVSR L AL  D +L  G   LRLVR EAL + W+ SA R      V P  P    +  V     ++       +G   +  C+G FAA+ A GLG V G P H+Y    + +  +      +   +E E    I+ +P FPESVFRG V  + V   DA+Q W+DV  H +RG EQA  I  ++
Sbjct:  163 MLKVLLAPEIPASLLTAPRKEFKSGTELAEAAKVSPMSVSRFLGALRRDGFLSSG-RTLRLVRREALFERWKSSAVR------VGPEQPSRYLISDVDGGQLKKF------MGRYRSEACIGLFAAADAYGLGHVSGVPPHVYVRK-IGSSIDGDQWKGIRPAREGEKPSLILRQPLFPESVFRGAVHSDQVSATDAIQVWLDVFLHPSRGREQAKLIEEKL 370          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V3I7B5_9BACT1.210e-3541.92Uncharacterized protein n=1 Tax=Armatimonadetes ba... [more]
A0A2V9AEK4_9BACT3.780e-3541.07Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A2V9GCF2_9BACT8.570e-3441.15Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A3D5SMC2_9BACT6.110e-3240.45RpiR family transcriptional regulator (Fragment) n... [more]
Q01P64_SOLUE8.190e-3236.91Uncharacterized protein n=1 Tax=Solibacter usitatu... [more]
A0A2V9FI27_9BACT1.610e-3138.22Uncharacterized protein n=3 Tax=Acidobacteria bact... [more]
A0A6P1J280_9BURK1.250e-3039.17Uncharacterized protein n=1 Tax=Hydrogenophaga sp.... [more]
A0A446C646_9BURK2.090e-3039.64Uncharacterized protein n=2 Tax=Achromobacter vete... [more]
UPI001E3B05054.120e-3036.77hypothetical protein n=1 Tax=Luteimonas sp. XNQY3 ... [more]
A0A5P2HAR0_9BURK5.640e-3039.64RpiR family transcriptional regulator n=1 Tax=Cupr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85096contigM-pyrifera_M_contig85096:2..867 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score128.3
Seed ortholog evalue4.6e-27
Seed eggNOG ortholog234267.Acid_7657
KEGG rclassRC00376,RC00563
KEGG koko:K15916
KEGG ReactionR01819,R02739,R02740,R03321
KEGG Pathwayko00010,ko00030,ko00051,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00500,map00520,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00001,M00004,M00114
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA-binding transcription factor activity
EggNOG OGsCOG1737@1,COG1737@2
EC5.3.1.8,5.3.1.9
COG Functional cat.K
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size866
Cds size669
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85096.19832.1prot_M-pyrifera_M_contig85096.19832.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85096 14..682 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816759.1061938-UTR-M-pyrifera_M_contig85096:1..131622816759.1061938-UTR-M-pyrifera_M_contig85096:1..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85096 2..13 +
1692278161.4634864-UTR-M-pyrifera_M_contig85096:1..131692278161.4634864-UTR-M-pyrifera_M_contig85096:1..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85096 2..13 +
1622816759.1303313-UTR-M-pyrifera_M_contig85096:682..8671622816759.1303313-UTR-M-pyrifera_M_contig85096:682..867Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85096 683..867 +
1692278161.5057428-UTR-M-pyrifera_M_contig85096:682..8671692278161.5057428-UTR-M-pyrifera_M_contig85096:682..867Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85096 683..867 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816759.118502-CDS-M-pyrifera_M_contig85096:13..6821622816759.118502-CDS-M-pyrifera_M_contig85096:13..682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85096 14..682 +
1692278161.4843738-CDS-M-pyrifera_M_contig85096:13..6821692278161.4843738-CDS-M-pyrifera_M_contig85096:13..682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85096 14..682 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85096.19832.1

>prot_M-pyrifera_M_contig85096.19832.1 ID=prot_M-pyrifera_M_contig85096.19832.1|Name=mRNA_M-pyrifera_M_contig85096.19832.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp
MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVR
GAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARR
ARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQ
LDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFH
AARGEEQASEIAARIWSERWSH*
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mRNA from alignment at M-pyrifera_M_contig85096:2..867+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85096.19832.1 ID=mRNA_M-pyrifera_M_contig85096.19832.1|Name=mRNA_M-pyrifera_M_contig85096.19832.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=866bp|location=Sequence derived from alignment at M-pyrifera_M_contig85096:2..867+ (Macrocystis pyrifera P11B4 male)
CTCCTCAAGGTCATGCTCGCCCGAGATGTCCCCGCCGAGCTGCTGGGTGC ACCGCGCGGTGAGGTGCGCTCTGCGAGCGCGCTGGCGGAGCTCGCGGGTG TGTCGAGTGCCAGCGTCTCACGCATCCTCAAGGCGCTCGAAGCCGACGAC TACTTGGTGCGCGGCGCGCATGAGCTCCGCCTGGTCCGGATCGAGGCCTT GCTGCAAGCGTGGCGCCGATCCGCTCAGCGACCTCTGGAACAGTGGCTCG TCCGCCCATCCTTGCCCGGAGGCGACCCTCTCGATCACGTGCACTCTGCG CTGGCTCGGCGCGCGCGGTCCCACGCATCCCCGGTCGGCCCTGAAGGCGC GCGCATGTGCCTCGGCCACTTCGCAGCGTCCCGCGCACTCGGCCTCGGCT TCGTCCGCGGCGCCCCTCTGCACCTGTACTGCGAAGCCCCGTTGCCGGCC CTGTTCGAACAGCTCGACCTCGTCGCCGTCGAGCATCCAAAGGAAGCCGA ATGGATCGTGGTCCGCCCCGCCTTCCCCGAGTCCGTCTTCCGCGGATGCG TCGAGCGCAACGGGGTCCCAGTCGCCGATGCCCTGCAGTGCTGGATCGAC GTCTCGTTCCACGCAGCGCGCGGAGAGGAGCAGGCCAGCGAGATCGCGGC CCGCATCTGGAGCGAGCGATGGAGCCACTGAACGAGGTCGCTCTGGCGCG AGCCTTGATCGCTCTCGAAGAGGTGCGCGAACGGTTGGTCGTCGTCGGTG GGACGGCCCATCGACTCTACGCGCGCCACCCCCTTGCGCGTGAAACCGGC CAGATGCCCTTGACCACCGAAGACGTCGACCTGGCCGCACCGGGGGATCT CTCCAGTACGCGCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85096:2..867+

>mRNA_M-pyrifera_M_contig85096.19832.1 ID=mRNA_M-pyrifera_M_contig85096.19832.1|Name=mRNA_M-pyrifera_M_contig85096.19832.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig85096:2..867+ (Macrocystis pyrifera P11B4 male)
ATGCTCGCCCGAGATGTCCCCGCCGAGCTGCTGGGTGCACCGCGCGGTGA
GGTGCGCTCTGCGAGCGCGCTGGCGGAGCTCGCGGGTGTGTCGAGTGCCA
GCGTCTCACGCATCCTCAAGGCGCTCGAAGCCGACGACTACTTGGTGCGC
GGCGCGCATGAGCTCCGCCTGGTCCGGATCGAGGCCTTGCTGCAAGCGTG
GCGCCGATCCGCTCAGCGACCTCTGGAACAGTGGCTCGTCCGCCCATCCT
TGCCCGGAGGCGACCCTCTCGATCACGTGCACTCTGCGCTGGCTCGGCGC
GCGCGGTCCCACGCATCCCCGGTCGGCCCTGAAGGCGCGCGCATGTGCCT
CGGCCACTTCGCAGCGTCCCGCGCACTCGGCCTCGGCTTCGTCCGCGGCG
CCCCTCTGCACCTGTACTGCGAAGCCCCGTTGCCGGCCCTGTTCGAACAG
CTCGACCTCGTCGCCGTCGAGCATCCAAAGGAAGCCGAATGGATCGTGGT
CCGCCCCGCCTTCCCCGAGTCCGTCTTCCGCGGATGCGTCGAGCGCAACG
GGGTCCCAGTCGCCGATGCCCTGCAGTGCTGGATCGACGTCTCGTTCCAC
GCAGCGCGCGGAGAGGAGCAGGCCAGCGAGATCGCGGCCCGCATCTGGAG
CGAGCGATGGAGCCACTGAATGCTCGCCCGAGATGTCCCCGCCGAGCTGC
TGGGTGCACCGCGCGGTGAGGTGCGCTCTGCGAGCGCGCTGGCGGAGCTC
GCGGGTGTGTCGAGTGCCAGCGTCTCACGCATCCTCAAGGCGCTCGAAGC
CGACGACTACTTGGTGCGCGGCGCGCATGAGCTCCGCCTGGTCCGGATCG
AGGCCTTGCTGCAAGCGTGGCGCCGATCCGCTCAGCGACCTCTGGAACAG
TGGCTCGTCCGCCCATCCTTGCCCGGAGGCGACCCTCTCGATCACGTGCA
CTCTGCGCTGGCTCGGCGCGCGCGGTCCCACGCATCCCCGGTCGGCCCTG
AAGGCGCGCGCATGTGCCTCGGCCACTTCGCAGCGTCCCGCGCACTCGGC
CTCGGCTTCGTCCGCGGCGCCCCTCTGCACCTGTACTGCGAAGCCCCGTT
GCCGGCCCTGTTCGAACAGCTCGACCTCGTCGCCGTCGAGCATCCAAAGG
AAGCCGAATGGATCGTGGTCCGCCCCGCCTTCCCCGAGTCCGTCTTCCGC
GGATGCGTCGAGCGCAACGGGGTCCCAGTCGCCGATGCCCTGCAGTGCTG
GATCGACGTCTCGTTCCACGCAGCGCGCGGAGAGGAGCAGGCCAGCGAGA
TCGCGGCCCGCATCTGGAGCGAGCGATGGAGCCACTGA
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