mRNA_M-pyrifera_M_contig85095.19831.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A2E5X720_9BACT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X720_9BACT) HSP 1 Score: 224 bits (570), Expect = 5.220e-67 Identity = 125/244 (51.23%), Postives = 151/244 (61.89%), Query Frame = 1 Query: 4 FAFIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGFGGEMTQGSGGGESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWFSSPYTERSVEEVELEDGSVVLEGALMPLIHLPSTSEEVRAELDAALAVLEDRTAEPAAVDAAQATMLEHGEAAYPPLLSGYQRVAFDLELAPELTPRFTETLEQLSGEELTAHPERVEARGAAALASRWFAWYYENGGDRVQNTGEDKWGGLLTG 735 F+F++RRLLLM+PTT GVALVVF LY APGD A+V G GGEM Q S G ++ F RE+GLDRS VVQFL YIGP NLSR+GHPWF++P+TER EE+EL G VLEG +I LP T +R + +AVLED A A +AA + G A P + + VA DLE R + LE+ G ERVE G AL WF WYY +GG RV+N+GED WGGLL G Sbjct: 2 FSFVLRRLLLMIPTTFGVALVVFMLYQAAPGDPATVMMGMGGEMNQNSDAG-ARIDTFRREHGLDRSLVVQFLSYIGPFNLSRNGHPWFTTPFTERKTEELELASGQAVLEGVPQEIICLPDTDPGMRERMSTLVAVLEDDGAGAEAWEAASHELAALGAQALPMVFTSLHGVAMDLERGAARIQRLSALLERSLGHSPELEAERVEQLGLGALVRHWFGWYYTHGGLRVRNSGEDPWGGLLAG 244
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A2D5W5V6_9BACT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W5V6_9BACT) HSP 1 Score: 221 bits (563), Expect = 6.600e-66 Identity = 127/250 (50.80%), Postives = 153/250 (61.20%), Query Frame = 1 Query: 4 FAFIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGFGGEMTQGSGGGESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWFSSPYTERSVEEVELEDGSVVLEGALMPLIHLPSTSEEVRAELDAALAVLE-DRTAEPAAVDA-----AQATMLEHGEAAYPPLLSGYQRVAFDLELAPELTPRFTETLEQLSGEELTAHPERVEARGAAALASRWFAWYYENGGDRVQNTGEDKWGGLLTG 735 F+F+VRRLLLM+PTT GVALVVF LY APGD A+V G GGEM Q S G ++ F RE+GLDRS VVQF YIGP NLSR+GH WF++P+TER +EEV+LE G + EG M + HLP TS E R LD +AVLE D E + V A A ++ G A P L + VA DLE R ++ L +G ER E G AL WF WYY +GG RV+N+GED WGGLL G Sbjct: 2 FSFVVRRLLLMIPTTFGVALVVFMLYQAAPGDPATVMMGMGGEMNQNSDAG-ARIDTFRREHGLDRSLVVQFFSYIGPFNLSRNGHAWFTTPFTERKIEEVQLESGETLFEGKPMAIEHLPGTSPEERVALDEWVAVLENDHAGELSEVGAEAWARAGEQLVSRGATALPALFTSLHAVALDLERGAGRIERLSKVLALSTGHAPEVSAERQEQLGLGALVRHWFGWYYSHGGLRVRNSGEDPWGGLLAG 250
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A2D5XPB2_9BACT (ABC transmembrane type-1 domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XPB2_9BACT) HSP 1 Score: 206 bits (524), Expect = 3.670e-60 Identity = 119/245 (48.57%), Postives = 152/245 (62.04%), Query Frame = 1 Query: 7 AFIVRRLLLMVPTTLGVALVVFALYHVAPGDAASV--AQGFGGEMTQGSGGGESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWFSSPYTERSVEEVELEDGSVVLEGALMPLIHLPSTSEEVRAELDAALAVLEDRTAEPAAVDAAQATMLEHGEAAYPPLLSGYQRVAFDLELAPELTPRFTETLEQLSGEELTAHPERVEARGAAALASRWFAWYYENGGDRVQNTGEDKWGGLLTG 735 +FI+RRLLLMVPTTLG+ALVVF ++H APGD A+V G GG++ Q + E ++F R +GLDRS +VQF DY+GP+NL RDG PWFSSP+TER+ +V+L +G+ + EG +M + HLP TSE D A VL D A A AA T++ GE A P +LSG +A R L +G + + PER+E+ G A FAWYY NGG RVQNTG D WGGLL G Sbjct: 3 SFILRRLLLMVPTTLGIALVVFTIFHAAPGDPATVMIGAGTGGQLGQDTDV-EGMVEKFRRTHGLDRSLIVQFFDYVGPLNLDRDGVPWFSSPHTERTTRQVKLSNGTEIDEGKVMRIAHLPKTSEVDAERFDKARDVLADEAAGGEAWSAAHRTLVAGGEGARPAVLSGLNLLAESAGSRGAAIGRLIGALAANTGADFSVPPERIESLGGVARIRACFAWYYANGGYRVQNTGADWWGGLLVG 246
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A2D6Q9V3_9ARCH (ABC transmembrane type-1 domain-containing protein n=4 Tax=cellular organisms TaxID=131567 RepID=A0A2D6Q9V3_9ARCH) HSP 1 Score: 205 bits (521), Expect = 1.140e-59 Identity = 123/248 (49.60%), Postives = 155/248 (62.50%), Query Frame = 1 Query: 7 AFIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGFG--GEMTQGSGGGESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWFSSPYTERSVEEVELEDGSVVLEGALMPLIHLPSTSEEVRAELDAALAVLEDRTAEPAAVDAAQATMLEHGE----AAYPPLLSGYQRVAFDLELAPELTPRFTETLEQLSGEELTAHPERVEARGAAALASRWFAWYYENGGD-RVQNTGEDKWGGLL 729 AFI+RRLLLM+PTTLGVA VVF +YH+APGD A+V G G G+M S SK F ++GLDR+ ++QFLDYIGPVNLSRDG FSSPY ER VEEVEL DGS V EG +P+ +LP T E + E++ VL D A AA A + + E + A P L++ Q + + + R + L Q++G EL HP R+E G AL + WF WYYE GG RV+NTGE+ WGGLL Sbjct: 3 AFILRRLLLMIPTTLGVAAVVFGIYHLAPGDPATVMMGMGSGGQMATDSDSA-SKIDAFRIKHGLDRNPIIQFLDYIGPVNLSRDGCSLFSSPYGERKVEEVELPDGSTVPEGKPLPIAYLPDTPEGEQGEMEDLRQVLLDDAAGDAAWSNAVSRLKEKNKKPEGACLPALMTSLQELRLETDSRSHAIERVGDALAQITGHELQLHPLRLEQLGPGALINGWFRWYYEEGGGGRVKNTGENTWGGLL 249
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A2D6HG21_9BACT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HG21_9BACT) HSP 1 Score: 197 bits (501), Expect = 9.630e-57 Identity = 117/243 (48.15%), Postives = 146/243 (60.08%), Query Frame = 1 Query: 10 FIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGFGGEMTQG-SGGGESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWFSSPYTERSVEEVELEDGSVVLEGALMPLIHLPSTSEEVRAELD-AALAVLEDRTAEPAAVDAAQATMLEHGEAAYPPLLSGYQRVAFDLELAPELTPRFTETLEQLSGEELTAHPERVEARGAAALASRWFAWYYENGG-DRVQNTGEDKWGGLL 729 FI+RRLLLM+PTTLGVA VVFA+YH+APGD A+V G G G S ESK + F ++GLDR V+QFLDY+GPVNLSRDGHP+FSSPY ER +EEV L G +V EG + + L T EE RA +D A+ +L+D E A A E P L S + + + R + TL +L+G ++ HPER G+ A WF WYYE GG DRV N G+ WGGLL Sbjct: 4 FILRRLLLMIPTTLGVAAVVFAIYHLAPGDPATVMMGMGSGGQMGTSSDSESKIEAFRIKHGLDRHPVIQFLDYVGPVNLSRDGHPFFSSPYGERKIEEVVLASGEIVREGRPLAIDPLGETGEEERARIDEASERLLDDGLGEEAWAAARVELAACETERVLPALFSALFLLRLETDTRTPTVERVSATLAELTGADIEVHPERAVQLGSGATIREWFRWYYEEGGGDRVANGGQRPWGGLL 246
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A518BI61_9BACT (Dipeptide transport system permease protein DppB n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BI61_9BACT) HSP 1 Score: 184 bits (468), Expect = 6.550e-52 Identity = 113/246 (45.93%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 7 AFIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGF--GGEMTQGSGGGESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWFSSPYTERSVEEVELEDGSVVLEGALMPLIHLPSTSEEVRAELDAALAVLEDRTAEPAAVDAAQATMLEHGEAAYPPLLSGYQRV--AFDLELAPELTPRFTETLEQLSGEELTAHPERVEARGAAALASRWFAWYYE-NGGDRVQNTGEDKWGGLL 729 AFI+RRLLLM+PTT GVALV+F +YH APGD A+V G GG M+QGS G ++ F RE+GLDR+ VVQF++Y+GP NL RDGHPWFSSPYTER E +E++ V+ G + + +LP TS+E R ++D A+ L T DAA A + G+ A P LL+ V A ++ P + L ++G E E L WF WYY GGDRV+N+GE+ WGGLL Sbjct: 3 AFILRRLLLMIPTTFGVALVIFGIYHAAPGDPATVMMGMSSGGNMSQGSDAG-ARIDAFRREFGLDRNVVVQFVNYMGPFNLLRDGHPWFSSPYTERESERIEVDGVGQVVVGKALDIDYLPGTSDERRTQIDTAVKGLLGATD----TDAAVAEVAGFGDDAIPALLTELHAVRRARGADV-PTRARLLNDALVAVTGHEPAVPVSVEEEAPRQLLIDHWFGWYYTAGGGDRVKNSGENPWGGLL 242
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A518EVZ1_9BACT (Dipeptide transport system permease protein DppB n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EVZ1_9BACT) HSP 1 Score: 182 bits (463), Expect = 5.210e-51 Identity = 117/260 (45.00%), Postives = 160/260 (61.54%), Query Frame = 1 Query: 7 AFIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGFGGEMTQGSGG-GESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWFSSPYTERSVEEVELEDGSV-VLEGALMPLIHLPSTSEEVRAELDAALAVL--EDRTAEPAAVDAAQATMLEH-GEAA--YPPLLSGYQRVAFDLELAPELTP----RFTETLEQLSGEELTAHPERVEAR-----GAAALASRWFAWYYENGGD-RVQNTGEDKWGGLLTG 735 AFI+RRLLLM+PTT+GVALV+F+LYH+APGD A +A G + T G GG G+S+ QF RE+GLDR++ VQF DYIGP NLS DGHPWF+SP TER +E+VE+E V +G + L ST++ R L +A + D T +P DAA A ++ + G++A ++ + F L+L R TLE+++G ++ A E +A G L WFAWYY +GG RV+N GE ++GGLLTG Sbjct: 3 AFILRRLLLMIPTTIGVALVIFSLYHIAPGDPALIAIGSQADATAGGGGDGDSRIDQFRREHGLDRAFFVQFFDYIGPFNLSPDGHPWFTSPRTERKIEDVEVEGRDTPVRQGLPAEIEPLYSTTDAERETLTTLVANVTSSDETTDPGRADAAMADLVAYAGQSADNRDEAVAAMMQGLFSLKLGGSTDEPGIVRLDATLEKVTGVDIQASLEYFDAALFEKDGVRHLLKSWFAWYYRDGGGYRVRNRGEQRFGGLLTG 262
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A518D2G4_9BACT (Dipeptide transport system permease protein DppB n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D2G4_9BACT) HSP 1 Score: 180 bits (457), Expect = 3.320e-50 Identity = 119/249 (47.79%), Postives = 154/249 (61.85%), Query Frame = 1 Query: 10 FIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGF--GGEMTQGSGGGESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWFSSPYTERSVEEVELEDGSVVLEGALMPLIHLPSTSEEVRAELDA-ALAVLEDRTAEPAAVDAAQATMLEHGEAAYPPLLSGYQRVAF---DLELAPELTPRFTETLEQLSGEEL--TAHPERVEARGAAALASRWFAWYY-ENGGDRVQNTGEDKWGGLL 729 FI+RRLLLM+PTTLGVA VVF ++ APGDAA+V G GGEM G ES+K+ FE E+GLDR+ V+Q+LDYIGP NLSRDGH WF SPY+ER VE VEL+ G + G + + P EEVR L+ AL + +D E AA+A ++E G A+P +LS +QR DLE L + + + G ++ + + E R L S WF WYY E GGDRVQN+GE+ WGGL+ Sbjct: 4 FILRRLLLMIPTTLGVAAVVFTIFQAAPGDAATVMLGASGGGEMG-GKSDFESRKRAFEIEHGLDRNPVIQYLDYIGPFNLSRDGHSWFDSPYSEREVERVELDGGGEAVYGKPLRIPFPPDVPEEVRPVLEGHALTLTQDDATESERSAAAEA-LVEAGADAWPAVLSAFQRQEVRLDDLETLRRLDDVASRIVARTGGGDVGFASLLDGDEPRANDVLRS-WFGWYYTEGGGDRVQNSGENPWGGLV 249
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A7Y4SYZ7_9BACT (ABC transporter permease n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SYZ7_9BACT) HSP 1 Score: 69.3 bits (168), Expect = 4.300e-10 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 1 Query: 10 FIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGFGGEMTQGSGGGESKKQQFEREYGLDRSYVVQFLDYIGPVNLSRDGHPWF 270 +++RR+LL VPT LG+ + FAL +APGDAA +A G G + S + +F Y LD+ Q+L Y+GP +LS +GH WF Sbjct: 4 YVLRRVLLFVPTLLGITFLSFALLQLAPGDAAELALGGGSSEAEVS---QESVARFRHAYLLDQPIWKQYLHYLGPFDLSGEGHAWF 87
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Match: A0A1B1U8T4_9BRAD (Peptide ABC transporter permease n=8 Tax=Bradyrhizobium TaxID=374 RepID=A0A1B1U8T4_9BRAD) HSP 1 Score: 62.4 bits (150), Expect = 9.570e-8 Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 4 FAFIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGFGGEMTQGSGGGESKKQQF-EREYGLDRSYVVQFLDYI-GPVNLSRDGHPWFSSPYTERSVEEVEL 312 + +I++RLLLM+PT LG AL+VF L + PGD + M G+G + K + E GLDRSYVVQFLD+I G V W P E EL Sbjct: 2 YQYILKRLLLMIPTLLGAALLVFLLLRLVPGDVCVL------RMAGGAGYVDPKAIELCHAELGLDRSYVVQFLDFIWGFVRFDFGKSMWTGRPIVEEVALRFEL 100 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85095.19831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85095.19831.1 >prot_M-pyrifera_M_contig85095.19831.1 ID=prot_M-pyrifera_M_contig85095.19831.1|Name=mRNA_M-pyrifera_M_contig85095.19831.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp VFAFIVRRLLLMVPTTLGVALVVFALYHVAPGDAASVAQGFGGEMTQGSGback to top mRNA from alignment at M-pyrifera_M_contig85095:1..735- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85095.19831.1 ID=mRNA_M-pyrifera_M_contig85095.19831.1|Name=mRNA_M-pyrifera_M_contig85095.19831.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=735bp|location=Sequence derived from alignment at M-pyrifera_M_contig85095:1..735- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85095:1..735- >mRNA_M-pyrifera_M_contig85095.19831.1 ID=mRNA_M-pyrifera_M_contig85095.19831.1|Name=mRNA_M-pyrifera_M_contig85095.19831.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig85095:1..735- (Macrocystis pyrifera P11B4 male)back to top |