mRNA_M-pyrifera_M_contig85087.19828.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85087.19828.1
Unique NamemRNA_M-pyrifera_M_contig85087.19828.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: A0A7X5WYB1_9ACTN (AMP-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WYB1_9ACTN)

HSP 1 Score: 324 bits (830), Expect = 5.140e-106
Identity = 163/285 (57.19%), Postives = 205/285 (71.93%), Query Frame = 1
Query:   10 VESDPDEVAILLFTSGTAGPPKPAMLSHRNLSFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            V++D D +A++LFTSGTAG PK AM+SH NL+  QQ +I  P A +  D+V L  LP++H++GLNV LL+TLR GGT+VL   FDP +AA     H VT+  GVPPMWRA ++   I   +F+ V R+ +GASAL   L+ +F+DRFGVEL EGYGLTET+ + T+ IG PVR G+VG   PGVEV VVD      P DD+G + VR   VF GYWE+EEAT++VLDD+GWL T DIGV+SEDGYL LVDRAKDLIIVSGFNVYPFE E V+ +HP +     +G
Sbjct:   88 VDADDDHLAVMLFTSGTAGSPKAAMISHGNLTSNQQAVIDTPGAGLGPDSVVLAILPVAHMFGLNVSLLSTLRVGGTIVLQAAFDPTVAAAAIARHGVTVLAGVPPMWRAFLDAPGIADDTFSGVDRLGSGASALHPTLWYEFRDRFGVELLEGYGLTETSPVVTSHIGIPVRPGTVGKPAPGVEVKVVDDLGNEVPADDTGEIMVRSAGVFQGYWEDEEATRAVLDDEGWLSTRDIGVLSEDGYLALVDRAKDLIIVSGFNVYPFEVETVIVQHPKVGQTVVIG 372          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: A0A7K1C6W6_9ACTN (AMP-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1C6W6_9ACTN)

HSP 1 Score: 280 bits (716), Expect = 4.860e-88
Identity = 148/288 (51.39%), Postives = 191/288 (66.32%), Query Frame = 1
Query:    1 IDAVESDPDEVAILLFTSGTAGPPKPAMLSHRNLSFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            I+  +SDP   A+L+FTSGTAG PK A+L+H NL        +  D   + D V  V LP+ H++GLNV L  +L AG  VVL+ RFDPV A +   E  VT+ PG PP+W A+   E +DA++F+ V    TGA+ +P    +  + RFG++LREGYGLTE A + T+S+G   R GSVG    G++V +VD      PV DSG V V+GPNVF GYW + EAT  VLD DGWL TGDIG++ +DGYLYLVDRAKDLIIVSGFNVYP E E+V+ RHP++   G +G
Sbjct:  155 IEVNDSDP---AVLIFTSGTAGSPKAAILTHLNLLENICQNFSTSDHIQEGDVVFGV-LPMYHIFGLNVVLGMSLMAGACVVLVQRFDPVTAVETFAERGVTIVPGAPPIWVAMSLMEGLDASAFSTVRLALTGAARMPEDASERLRVRFGLDLREGYGLTEAAPVVTSSVGVQNRPGSVGRAVEGIDVRIVDESGNDVPVGDSGEVWVKGPNVFAGYWNDPEATARVLDRDGWLHTGDIGLVDDDGYLYLVDRAKDLIIVSGFNVYPAEVEEVLMRHPAVFEAGVVG 438          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: UPI001C628E79 (AMP-binding protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C628E79)

HSP 1 Score: 276 bits (705), Expect = 2.160e-86
Identity = 143/289 (49.48%), Postives = 186/289 (64.36%), Query Frame = 1
Query:    1 IDAVESDPDEVAILLFTSGTAGPPKPAMLSHRNL-SFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            +  VE   D+ A+L+FTSGTAG P+PA+LSH NL + V Q L       V+ D V+L  LPL H+ GLN  L   LR+G   +LM RFDP  A +    H VT+  G P MW A      +   +FANV   T+GA+AL   + +  ++RF +EL EGYGLTE + + T+ IG PV+ GS+G    GVEV +VD D     V D G + VRGPNVF GYW EE+   SV+ DDGWL TGD+GV+ ++GYL+LVDRAKDLIIVSGFNV+P E E+V+  HP+I+ C  +G
Sbjct:  146 VPVVERAEDDTAVLMFTSGTAGSPRPAILSHGNLLANVDQVLSVREVVHVEGD-VSLCVLPLFHIMGLNAILGVALRSGSATLLMERFDPQSAVEAIQRHTVTIVAGAPTMWAAWASLPGLPPGAFANVRTATSGAAALSPDVAERMRERFALELHEGYGLTEASPVVTSGIGLPVKPGSIGAPLDGVEVRLVDQDGEDVLVGDEGEIWVRGPNVFKGYWGEEDGC-SVITDDGWLRTGDLGVVDDEGYLFLVDRAKDLIIVSGFNVFPAEVEEVLLEHPAIEDCAVVG 432          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: A0A8F4FP02_9ACTN (AMP-binding protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FP02_9ACTN)

HSP 1 Score: 270 bits (691), Expect = 7.640e-86
Identity = 141/286 (49.30%), Postives = 186/286 (65.03%), Query Frame = 1
Query:   10 VESDPDEVAILLFTSGTAGPPKPAMLSHRNL-SFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            V+ + D++A+L+FTSGTAG PK AMLSH NL + + QTL   PD     D V    LP+ H++GLNV L T LRAG TV+L+ RFDP+ A +   +H V++  G P MW A      +   +FA+V   T+GA+ L   + +  K RF +E+ EGYGLTE + + TAS G P R GSVG    GVEV +VD D   A V D G + V GPNVF GYW + EAT++ +DDDGWL TGDI ++ +DG+L+LVDRAKDL+IVSGFNV+P E E+VV     +  C  +G
Sbjct:   28 VDREADDLAVLMFTSGTAGSPKAAMLSHGNLLANIDQTLGLRPDGG-SPDDVAFAVLPMFHIFGLNVVLGTALRAGATVLLVERFDPMSAIEAIQKHGVSVVAGAPSMWAAWASMPGLPGDTFASVVAATSGAARLDPSVAEAIKARFDLEIGEGYGLTEASPVVTASFGLPFRPGSVGAPVDGVEVRLVDLDGDDALVGDPGEIWVHGPNVFQGYWNDAEATRNAIDDDGWLHTGDIALVDDDGFLFLVDRAKDLVIVSGFNVFPAEVEEVVLSMDGVRECAIVG 312          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: A0A7W0KST7_9ACTN (AMP-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KST7_9ACTN)

HSP 1 Score: 273 bits (698), Expect = 2.490e-85
Identity = 139/281 (49.47%), Postives = 182/281 (64.77%), Query Frame = 1
Query:   25 DEVAILLFTSGTAGPPKPAMLSHRNL-SFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            D++A+L+FTSGTAG PK AMLSH NL + + Q +    D   +AD V    LP+ H++GLNV L T LRAG  V+L+ RFDP  A D   +H VT+  G P MW +      +D   FA +   T+GA+ L  V+    KDRFG+E+ EGYGLTE + + TAS G P R GSVG     +EV +VD D + A + D G + V+GPNVF GYW + +AT + +DDDGWL TGDI ++ EDGYLYLVDRAKDL+IVSGFNV+P E E+V+     +  C  +G
Sbjct:  159 DDLAVLMFTSGTAGSPKAAMLSHGNLLANIDQVMALREDGG-NADDVGFGVLPMFHIFGLNVVLGTALRAGAAVLLVERFDPTSAVDAIQKHGVTVLAGAPTMWTSWATMSELDGGVFATLQVATSGAARLDPVVAQTMKDRFGIEVNEGYGLTEASPVVTASTGLPWRPGSVGAPVDDLEVRLVDLDGQDALIGDPGEIWVKGPNVFQGYWNDAQATSNCIDDDGWLRTGDIALVDEDGYLYLVDRAKDLVIVSGFNVFPAEVEEVILSMDGVLECAVVG 438          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: A0A351ET63_9ACTN (AMP-dependent synthetase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ET63_9ACTN)

HSP 1 Score: 272 bits (695), Expect = 3.850e-85
Identity = 137/278 (49.28%), Postives = 188/278 (67.63%), Query Frame = 1
Query:   10 VESDPDEVAILLFTSGTAGPPKPAMLSHRNLSFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSI 843
            ++ DPD +A LL TSG +G PK AMLSH NL++VQQ+++     ++ AD V+L  LP +H+ GLN+ +L+ LRAGG VVL +RFD   +  L  EHQVT+  G PPMW+     ++  A + A+V    +GA++LP+ +++  +   GVE+R+GYGLTE+++      G  VR  SVG   PGVE+V+VD D     + D G V VR P+VF GY  + EAT S+L DDGWL TGD+G+  +DGYLYLVDR KD+IIVSGFNVYP E EDV+  HP++
Sbjct:  136 LDVDPDHLAFLLSTSGVSGTPKIAMLSHNNLAWVQQSIVGDGPQQLRADDVSLAVLPPAHILGLNLVILSALRAGGAVVLQHRFDVDESLRLVSEHQVTMIVGAPPMWQRWAAADA-PADAMASVRFARSGAASLPADVYERLRTHCGVEVRQGYGLTESSAALATGRGLDVRVTSVGKPLPGVEMVLVDDDGEPVDIGDIGEVVVRAPSVFKGYLNDPEATASILTDDGWLWTGDVGLFDDDGYLYLVDRVKDIIIVSGFNVYPAEVEDVLMEHPNV 412          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: A0A7K1B6R1_9ACTN (AMP-binding protein n=2 Tax=root TaxID=1 RepID=A0A7K1B6R1_9ACTN)

HSP 1 Score: 272 bits (695), Expect = 5.960e-85
Identity = 143/288 (49.65%), Postives = 185/288 (64.24%), Query Frame = 1
Query:    4 DAVESDPDEVAILLFTSGTAGPPKPAMLSHRNL-SFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            + VE +PD VA L+FTSGTAG P+ AMLSH NL + ++Q   A+   ++D D V    LPL H++GLNV L  +L  G  VVL+ RFDP  A D   E  VT+ PG PP+W A    +   A SFA V    TGA+ +P       K+RFG+++ EGYGLTE + + T+S G PV+ GSVG    G+EV +VD         D+G + V+GPNVFLGY ++ E T  VL  DGWL TGDIG + ++GYLYLVDRAKDLIIVSGFNVYP E E+V+ +HP +   G +G
Sbjct:  147 ELVEVEPDTVAALMFTSGTAGSPRAAMLSHGNLLANLEQGRSAN--VQIDTDDVVYGVLPLFHIFGLNVVLGLSLARGACVVLVQRFDPSTALDTIRERGVTVVPGAPPLWLAFSHFDEAPADSFATVKLALTGAARMPEEAMKRIKERFGLDVHEGYGLTEASPVVTSSAGMPVKFGSVGKVLDGIEVRLVDESGDDVVAGDAGEIWVKGPNVFLGYHDDPEQTARVLTSDGWLRTGDIGTVDDEGYLYLVDRAKDLIIVSGFNVYPAEVEEVLGQHPGVAEVGVVG 432          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: A0A7V9DN28_9ACTN (AMP-binding protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9DN28_9ACTN)

HSP 1 Score: 272 bits (695), Expect = 7.790e-85
Identity = 140/283 (49.47%), Postives = 185/283 (65.37%), Query Frame = 1
Query:   19 DPDEVAILLFTSGTAGPPKPAMLSHRNL-SFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            D D++A+L+FTSGTAG PK AMLSHRNL S ++Q   +    R  +D V    LPL H++GLNV L   L  G TVVL+ RFDP  A +     ++T+ PGVP MW A+ + E++   +F  V    +GA+ LP    +  + RFG+ + EGYGLTE + + T S G   R GS+G    GV+V +V+ D    PV D+G + VRG NVFLGY ++ EAT+ VL  DGWL TGDI ++ EDGYLYLVDRAKDL+IVSGFNVYP E EDV+ +HP++   G +G
Sbjct:  160 DADQLAVLIFTSGTAGSPKAAMLSHRNLLSNIEQARSSGD--RFSSDDVVYAVLPLFHIFGLNVVLSAALAEGATVVLVQRFDPATAIESIRARKITVMPGVPTMWVAMSQLENVPDDAFHGVRLALSGAARLPVETAESMRSRFGLSISEGYGLTEASPVVTGSAGHEPRFGSIGKVLDGVDVKLVNEDGEEPPVGDAGEIWVRGENVFLGYLDDPEATERVLTPDGWLRTGDIAIVDEDGYLYLVDRAKDLVIVSGFNVYPVEVEDVLMQHPAVLEAGVIG 440          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: A0A524BAF2_9ACTN (Long-chain fatty acid--CoA ligase n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524BAF2_9ACTN)

HSP 1 Score: 271 bits (694), Expect = 9.620e-85
Identity = 143/286 (50.00%), Postives = 184/286 (64.34%), Query Frame = 1
Query:    7 AVESDPDEVAILLFTSGTAGPPKPAMLSHRNLSFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            +V  D D  A+L+FTSGTAG  + A LSH NL        +  D     D V  V LP+ H++GLNV L  TL+AG  VVL+ RFDP+ A +   E  +T+FPG P +W AL   E + A +FA++    TGA+ +P    D    +FGV LREGYGLTE A + T+S+G   R+GSVG    GVEV VVD D   A V DSG V V+G NVF+GYW + +AT  VLD +GWL TGD+G +  DGYLYL+DRAKDLIIVSGFNV+P E E+V+ +HP++   G +G
Sbjct:  154 SVPVDSDHPAVLIFTSGTAGASRAATLSHGNLLANIDQSNSTSDHIKTGDVVFGV-LPMFHIFGLNVVLGVTLQAGACVVLVQRFDPITAVETIAERNITIFPGAPALWVALSLLEGVPADAFASIRLALTGAARMPDEAADRLLAKFGVRLREGYGLTEAAPVVTSSVGVEARRGSVGKAVDGVEVRVVDEDGNDALVGDSGEVWVKGANVFVGYWNDPDATARVLDGEGWLHTGDVGTVDADGYLYLLDRAKDLIIVSGFNVFPAEVEEVLMKHPAVLEAGVVG 438          
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Match: UPI001D1252E2 (AMP-binding protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D1252E2)

HSP 1 Score: 270 bits (691), Expect = 2.430e-84
Identity = 139/285 (48.77%), Postives = 180/285 (63.16%), Query Frame = 1
Query:   10 VESDPDEVAILLFTSGTAGPPKPAMLSHRNLSFVQQTLIAHPDARVDADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQVTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRFGVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAPVDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLYLVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG 864
            VE  PD+VA+L+FTSGTAG P+PAML+H NL    + ++A  D   + D V    LP+ H++GLNV L   L AG  ++L+ RFDPV A +  ++H VT   G P MW A      +     A V R  +GA+ LP  +      RFG++L EGYGLTE + + TA I G    GSVG+  PGVEV +VD       V D G + V+GPNVF GYW + EAT  VL +DGWL TGD+GV+ +DG LYLVDRAKDLIIVSGFNV+P E E+V+  HP+I+    +G
Sbjct:  149 VERSPDDVAVLIFTSGTAGAPRPAMLTHGNLYTNIRQVLASDDRVQEPDDVVFGLLPMFHIFGLNVILGVGLAAGAAILLVERFDPVSAIESIVKHGVTTIAGPPTMWAAFAGLPGVTGEELATVRRAVSGAAKLPVEVAHAIDARFGLQLEEGYGLTEASPVVTAPITGVTPAGSVGIPVPGVEVRLVDAQGDDVLVGDHGELLVKGPNVFAGYWNDPEATARVLSEDGWLRTGDVGVVDDDGNLYLVDRAKDLIIVSGFNVFPAEVEEVLLEHPAIEGVAVVG 433          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85087.19828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5WYB1_9ACTN5.140e-10657.19AMP-binding protein n=1 Tax=Actinomycetia bacteriu... [more]
A0A7K1C6W6_9ACTN4.860e-8851.39AMP-binding protein n=1 Tax=Actinomycetia bacteriu... [more]
UPI001C628E792.160e-8649.48AMP-binding protein n=1 Tax=Iamia sp. SCSIO 61187 ... [more]
A0A8F4FP02_9ACTN7.640e-8649.30AMP-binding protein n=1 Tax=Aquihabitans sp. G128 ... [more]
A0A7W0KST7_9ACTN2.490e-8549.47AMP-binding protein n=1 Tax=Acidimicrobiia bacteri... [more]
A0A351ET63_9ACTN3.850e-8549.28AMP-dependent synthetase n=1 Tax=Acidimicrobiaceae... [more]
A0A7K1B6R1_9ACTN5.960e-8549.65AMP-binding protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A7V9DN28_9ACTN7.790e-8549.47AMP-binding protein n=2 Tax=Acidimicrobiia bacteri... [more]
A0A524BAF2_9ACTN9.620e-8550.00Long-chain fatty acid--CoA ligase n=1 Tax=Acidimic... [more]
UPI001D1252E22.430e-8448.77AMP-binding protein n=1 Tax=Aquihabitans sp. Kera ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85087contigM-pyrifera_M_contig85087:4..867 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score265.8
Seed ortholog evalue2.4e-68
Seed eggNOG ortholog1313172.YM304_31060
KEGG rclassRC00004,RC00014
KEGG koko:K01897
KEGG TC4.C.1.1
KEGG ReactionR01280
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM AMP-dependent synthetase and ligase
EggNOG OGs2GIUC@201174,COG0318@1,COG0318@2
EC6.2.1.3
COG Functional cat.IQ
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Exons1
Model size864
Cds size864
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816758.9367468-CDS-M-pyrifera_M_contig85087:3..8671622816758.9367468-CDS-M-pyrifera_M_contig85087:3..867Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85087 4..867 -
1692278161.3768568-CDS-M-pyrifera_M_contig85087:3..8671692278161.3768568-CDS-M-pyrifera_M_contig85087:3..867Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85087 4..867 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85087.19828.1prot_M-pyrifera_M_contig85087.19828.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85087 4..867 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85087.19828.1

>prot_M-pyrifera_M_contig85087.19828.1 ID=prot_M-pyrifera_M_contig85087.19828.1|Name=mRNA_M-pyrifera_M_contig85087.19828.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=288bp
IDAVESDPDEVAILLFTSGTAGPPKPAMLSHRNLSFVQQTLIAHPDARVD
ADAVNLVALPLSHVYGLNVCLLTTLRAGGTVVLMNRFDPVLAADLAIEHQ
VTLFPGVPPMWRALVENESIDATSFANVHRMTTGASALPSVLFDDFKDRF
GVELREGYGLTETASLATASIGGPVRQGSVGMTFPGVEVVVVDYDDRIAP
VDDSGAVKVRGPNVFLGYWEEEEATKSVLDDDGWLLTGDIGVMSEDGYLY
LVDRAKDLIIVSGFNVYPFEAEDVVSRHPSIDPCGAMG
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mRNA from alignment at M-pyrifera_M_contig85087:4..867-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85087.19828.1 ID=mRNA_M-pyrifera_M_contig85087.19828.1|Name=mRNA_M-pyrifera_M_contig85087.19828.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig85087:4..867- (Macrocystis pyrifera P11B4 male)
ATCGACGCCGTCGAATCCGACCCCGACGAGGTGGCGATCCTGCTCTTCAC GAGTGGAACCGCCGGGCCACCGAAGCCTGCCATGCTCTCGCACCGCAACC TCAGCTTCGTGCAGCAGACGCTCATCGCTCACCCCGATGCGCGAGTCGAC GCCGATGCGGTGAACCTCGTGGCCCTGCCGCTCTCCCACGTCTACGGGCT GAACGTCTGCCTGCTCACAACGCTGCGGGCAGGAGGCACCGTGGTCCTGA TGAATCGGTTCGACCCTGTGCTTGCCGCCGACCTCGCCATCGAGCACCAG GTCACCCTCTTCCCGGGAGTGCCGCCGATGTGGCGAGCGCTCGTGGAGAA CGAATCGATCGATGCAACGTCATTCGCCAATGTCCACCGGATGACCACCG GCGCCTCGGCGTTGCCCTCGGTGTTGTTCGATGACTTCAAGGATCGATTC GGCGTCGAACTCCGCGAGGGCTACGGCCTGACCGAGACGGCGTCGTTGGC CACCGCCTCGATCGGTGGTCCGGTCCGTCAGGGTTCGGTGGGGATGACCT TCCCCGGCGTCGAAGTCGTGGTCGTCGACTACGACGACCGGATCGCTCCG GTCGACGACTCGGGCGCGGTGAAGGTCCGAGGGCCCAACGTGTTCCTCGG CTACTGGGAGGAAGAGGAAGCAACCAAGTCGGTGCTCGACGACGACGGCT GGCTGCTCACCGGCGACATCGGCGTGATGTCCGAGGACGGCTACCTCTAT CTCGTCGACCGGGCCAAGGACCTCATCATCGTCTCGGGCTTCAACGTCTA TCCGTTCGAGGCCGAAGACGTCGTCTCTCGCCATCCGTCGATCGACCCCT GCGGGGCCATGGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85087:4..867-

>mRNA_M-pyrifera_M_contig85087.19828.1 ID=mRNA_M-pyrifera_M_contig85087.19828.1|Name=mRNA_M-pyrifera_M_contig85087.19828.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1728bp|location=Sequence derived from alignment at M-pyrifera_M_contig85087:4..867- (Macrocystis pyrifera P11B4 male)
ATCGACGCCGTCGAATCCGACCCCGACGAGGTGGCGATCCTGCTCTTCAC
GAGTGGAACCGCCGGGCCACCGAAGCCTGCCATGCTCTCGCACCGCAACC
TCAGCTTCGTGCAGCAGACGCTCATCGCTCACCCCGATGCGCGAGTCGAC
GCCGATGCGGTGAACCTCGTGGCCCTGCCGCTCTCCCACGTCTACGGGCT
GAACGTCTGCCTGCTCACAACGCTGCGGGCAGGAGGCACCGTGGTCCTGA
TGAATCGGTTCGACCCTGTGCTTGCCGCCGACCTCGCCATCGAGCACCAG
GTCACCCTCTTCCCGGGAGTGCCGCCGATGTGGCGAGCGCTCGTGGAGAA
CGAATCGATCGATGCAACGTCATTCGCCAATGTCCACCGGATGACCACCG
GCGCCTCGGCGTTGCCCTCGGTGTTGTTCGATGACTTCAAGGATCGATTC
GGCGTCGAACTCCGCGAGGGCTACGGCCTGACCGAGACGGCGTCGTTGGC
CACCGCCTCGATCGGTGGTCCGGTCCGTCAGGGTTCGGTGGGGATGACCT
TCCCCGGCGTCGAAGTCGTGGTCGTCGACTACGACGACCGGATCGCTCCG
GTCGACGACTCGGGCGCGGTGAAGGTCCGAGGGCCCAACGTGTTCCTCGG
CTACTGGGAGGAAGAGGAAGCAACCAAGTCGGTGCTCGACGACGACGGCT
GGCTGCTCACCGGCGACATCGGCGTGATGTCCGAGGACGGCTACCTCTAT
CTCGTCGACCGGGCCAAGGACCTCATCATCGTCTCGGGCTTCAACGTCTA
TCCGTTCGAGGCCGAAGACGTCGTCTCTCGCCATCCGTCGATCGACCCCT
GCGGGGCCATGGGCATCGACGCCGTCGAATCCGACCCCGACGAGGTGGCG
ATCCTGCTCTTCACGAGTGGAACCGCCGGGCCACCGAAGCCTGCCATGCT
CTCGCACCGCAACCTCAGCTTCGTGCAGCAGACGCTCATCGCTCACCCCG
ATGCGCGAGTCGACGCCGATGCGGTGAACCTCGTGGCCCTGCCGCTCTCC
CACGTCTACGGGCTGAACGTCTGCCTGCTCACAACGCTGCGGGCAGGAGG
CACCGTGGTCCTGATGAATCGGTTCGACCCTGTGCTTGCCGCCGACCTCG
CCATCGAGCACCAGGTCACCCTCTTCCCGGGAGTGCCGCCGATGTGGCGA
GCGCTCGTGGAGAACGAATCGATCGATGCAACGTCATTCGCCAATGTCCA
CCGGATGACCACCGGCGCCTCGGCGTTGCCCTCGGTGTTGTTCGATGACT
TCAAGGATCGATTCGGCGTCGAACTCCGCGAGGGCTACGGCCTGACCGAG
ACGGCGTCGTTGGCCACCGCCTCGATCGGTGGTCCGGTCCGTCAGGGTTC
GGTGGGGATGACCTTCCCCGGCGTCGAAGTCGTGGTCGTCGACTACGACG
ACCGGATCGCTCCGGTCGACGACTCGGGCGCGGTGAAGGTCCGAGGGCCC
AACGTGTTCCTCGGCTACTGGGAGGAAGAGGAAGCAACCAAGTCGGTGCT
CGACGACGACGGCTGGCTGCTCACCGGCGACATCGGCGTGATGTCCGAGG
ACGGCTACCTCTATCTCGTCGACCGGGCCAAGGACCTCATCATCGTCTCG
GGCTTCAACGTCTATCCGTTCGAGGCCGAAGACGTCGTCTCTCGCCATCC
GTCGATCGACCCCTGCGGGGCCATGGGC
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