mRNA_M-pyrifera_M_contig85086.19826.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A3C1KNB0_9GAMM (MFS transporter n=9 Tax=Proteobacteria TaxID=1224 RepID=A0A3C1KNB0_9GAMM) HSP 1 Score: 356 bits (913), Expect = 1.580e-120 Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 1 Query: 1 TPPSAGAPSSLFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 TPPSAGAPSSLFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIA AVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF Sbjct: 4 TPPSAGAPSSLFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAAAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 180
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A2D4TFF8_9GAMM (MFS transporter (Fragment) n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D4TFF8_9GAMM) HSP 1 Score: 331 bits (848), Expect = 1.310e-114 Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 1 Query: 31 LFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWR 522 +FSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIA AVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWR Sbjct: 1 MFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAAAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWR 164
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A4R2LEG1_9GAMM (Putative MFS family arabinose efflux permease n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4R2LEG1_9GAMM) HSP 1 Score: 330 bits (847), Expect = 1.700e-110 Identity = 160/175 (91.43%), Postives = 166/175 (94.86%), Query Frame = 1 Query: 7 PSAGAPSSLFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 P A APS AGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGV DTAMGLLTGL FA+FYTLMGIPIARYADRANRRNLIA AVGIWS+FTAAQGLAQNYWQLLAYR+GVGVGEAGCSPPAHSML+DYYPAN+RATALGIYSLGIP+GILFGFFVGGWMNEWFGWRVAF Sbjct: 6 PGAAAPSESVGAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVGDTAMGLLTGLAFAVFYTLMGIPIARYADRANRRNLIAAAVGIWSLFTAAQGLAQNYWQLLAYRVGVGVGEAGCSPPAHSMLSDYYPANQRATALGIYSLGIPVGILFGFFVGGWMNEWFGWRVAF 180
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A359ENQ5_9GAMM (MFS transporter (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A359ENQ5_9GAMM) HSP 1 Score: 318 bits (815), Expect = 2.990e-107 Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 1 Query: 58 VLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 +LTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIA AVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF Sbjct: 1 MLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAAAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 158
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A3D0ZXH1_9GAMM (MFS transporter n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D0ZXH1_9GAMM) HSP 1 Score: 272 bits (696), Expect = 8.340e-88 Identity = 129/167 (77.25%), Postives = 145/167 (86.83%), Query Frame = 1 Query: 31 LFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 LFS TR Y L +LV+ YTFNFIDRQIL IL+EPI+LELG+SDTA+GLLTG FALFY +GIPIARYAD+ NRRNLIA+A+ IWS TA GLAQN+WQLLA RIGVGVGEAGCSPPAHSM+ADY+PA RATALGIYSLGIP+GILFGF GGW+NE+FGWRVAF Sbjct: 8 LFSPATRNYALGVLVVVYTFNFIDRQILSILLEPIKLELGLSDTALGLLTGFAFALFYATLGIPIARYADKNNRRNLIALALAIWSGMTALSGLAQNFWQLLAARIGVGVGEAGCSPPAHSMIADYFPAENRATALGIYSLGIPVGILFGFLAGGWLNEFFGWRVAF 174
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A349J5B9_9HYPH (MFS transporter n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A349J5B9_9HYPH) HSP 1 Score: 267 bits (683), Expect = 7.860e-86 Identity = 127/174 (72.99%), Postives = 148/174 (85.06%), Query Frame = 1 Query: 10 SAGAPSSLFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 SA ++SA R Y L ILV+ YTFNFIDRQIL IL+EP++ +LG+SDTAMG+LTG FA+FY +GIPIARYADR+NRRNLIA+A+GIWS FTA G+AQN+W LLA RIGVGVGEAGCSPPAHSM+ADYYPA +RATALGIYSLGIPIGI+FG F GGW+NE FGWR+AF Sbjct: 3 SASQSDKVYSA--RHYALGILVVVYTFNFIDRQILSILLEPVKADLGLSDTAMGMLTGFAFAMFYATLGIPIARYADRSNRRNLIALALGIWSFFTALSGVAQNFWHLLAARIGVGVGEAGCSPPAHSMIADYYPAEQRATALGIYSLGIPIGIMFGLFAGGWINELFGWRMAF 174
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A3R7RV49_9HYPH (MFS transporter n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3R7RV49_9HYPH) HSP 1 Score: 265 bits (678), Expect = 4.590e-85 Identity = 123/161 (76.40%), Postives = 143/161 (88.82%), Query Frame = 1 Query: 49 RRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 R Y L ILV+ YTFNFIDRQIL IL+EP++ +LG+SDTAMG+LTG FA+FY +GIPIARYADR+NRRNLIA+A+GIWS FTA G+AQN+W LLA RIGVGVGEAGCSPPAHSM+ADYYPA++RATALGIYSLGIPIGI+FG F GGW+NE FGWR+AF Sbjct: 15 RHYALGILVVVYTFNFIDRQILSILLEPVKNDLGLSDTAMGMLTGFAFAMFYATLGIPIARYADRSNRRNLIALALGIWSFFTALSGVAQNFWHLLAARIGVGVGEAGCSPPAHSMIADYYPADQRATALGIYSLGIPIGIMFGLFAGGWINELFGWRMAF 175
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A523MAM3_9GAMM (MFS transporter n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MAM3_9GAMM) HSP 1 Score: 265 bits (678), Expect = 5.450e-85 Identity = 125/168 (74.40%), Postives = 145/168 (86.31%), Query Frame = 1 Query: 28 SLFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 +LFSA TRRYVL LV+ YTFNFIDRQIL IL+EPI+L+L +SDT +G LTG FALFY +GIP+AR+AD NRRNLIAV++GIWS TA G+AQN+WQLL RIGVGVGEAGCSPPAH+ML+DYYP N+RATALGIYSLGIP+GILFGF GGW+NE+FGWRVAF Sbjct: 6 TLFSAATRRYVLGTLVVVYTFNFIDRQILSILLEPIKLDLELSDTQLGFLTGFAFALFYATLGIPLARWADAHNRRNLIAVSLGIWSGMTALSGVAQNFWQLLGARIGVGVGEAGCSPPAHAMLSDYYPPNQRATALGIYSLGIPVGILFGFIAGGWINEFFGWRVAF 173
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A3R7UAG4_9HYPH (MFS transporter (Fragment) n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3R7UAG4_9HYPH) HSP 1 Score: 258 bits (658), Expect = 9.660e-85 Identity = 118/161 (73.29%), Postives = 139/161 (86.34%), Query Frame = 1 Query: 49 RRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 R Y L ILV+ YTFNFIDRQIL IL++P++ +LG+SDTAMG+LTG FA FY +GIPIAR+ADR+NRRNL+A A+GIWS+ TA GLAQN+W LLA RIGVG+GEAGCSPPAHSM+ADYYPA +RATALGIYSLGIP+GI+FG F GGW+NE FGWR AF Sbjct: 14 RHYALAILVVVYTFNFIDRQILSILLQPVKDDLGLSDTAMGMLTGFAFAAFYATLGIPIARFADRSNRRNLVAWALGIWSLMTALSGLAQNFWHLLAARIGVGIGEAGCSPPAHSMIADYYPAEQRATALGIYSLGIPLGIMFGLFAGGWINELFGWRAAF 174
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Match: A0A3R7WR86_9GAMM (MFS transporter n=2 Tax=Gammaproteobacteria bacterium TMED182 TaxID=1986741 RepID=A0A3R7WR86_9GAMM) HSP 1 Score: 262 bits (669), Expect = 1.140e-83 Identity = 121/168 (72.02%), Postives = 142/168 (84.52%), Query Frame = 1 Query: 28 SLFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGVSDTAMGLLTGLGFALFYTLMGIPIARYADRANRRNLIAVAVGIWSVFTAAQGLAQNYWQLLAYRIGVGVGEAGCSPPAHSMLADYYPANERATALGIYSLGIPIGILFGFFVGGWMNEWFGWRVAF 531 S+FS RRY L++LV+ YTFNFIDRQIL IL+EPI+ +LG+SDTA+G+LTG FALFY +GIPIAR ADR NRRNLIA+A+ +WS TA GLAQN+W LL RIGVGVGEAGCSPPAHSM+ADY+P+ RATALGIY+LGIP GILFGF GGW+NE+FGWRVAF Sbjct: 11 SVFSPAMRRYALSVLVVVYTFNFIDRQILSILLEPIKQDLGLSDTALGMLTGFAFALFYATLGIPIARLADRGNRRNLIAIALTVWSAMTAVSGLAQNFWHLLIARIGVGVGEAGCSPPAHSMIADYFPSENRATALGIYALGIPFGILFGFIAGGWLNEFFGWRVAF 178 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85086.19826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85086.19826.1 >prot_M-pyrifera_M_contig85086.19826.1 ID=prot_M-pyrifera_M_contig85086.19826.1|Name=mRNA_M-pyrifera_M_contig85086.19826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp TPPSAGAPSSLFSAGTRRYVLTILVIAYTFNFIDRQILGILVEPIRLELGback to top mRNA from alignment at M-pyrifera_M_contig85086:2..532- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85086.19826.1 ID=mRNA_M-pyrifera_M_contig85086.19826.1|Name=mRNA_M-pyrifera_M_contig85086.19826.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=531bp|location=Sequence derived from alignment at M-pyrifera_M_contig85086:2..532- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85086:2..532- >mRNA_M-pyrifera_M_contig85086.19826.1 ID=mRNA_M-pyrifera_M_contig85086.19826.1|Name=mRNA_M-pyrifera_M_contig85086.19826.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig85086:2..532- (Macrocystis pyrifera P11B4 male)back to top |