mRNA_M-pyrifera_M_contig85046.19823.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85046.19823.1
Unique NamemRNA_M-pyrifera_M_contig85046.19823.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A0A5A8BIP0_9PLAN (DUF1501 domain-containing protein n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8BIP0_9PLAN)

HSP 1 Score: 506 bits (1302), Expect = 9.100e-178
Identity = 248/253 (98.02%), Postives = 249/253 (98.42%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLLT 759
            QTPILNLKPP GIS RQQRATLDLVQS+NRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQET ATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHT YCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLLT
Sbjct:  214 QTPILNLKPPTGISTRQQRATLDLVQSLNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETPATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTTYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLLT 466
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A0A517QBZ9_9PLAN (Uncharacterized protein n=10 Tax=Gimesia TaxID=1649453 RepID=A0A517QBZ9_9PLAN)

HSP 1 Score: 493 bits (1270), Expect = 1.320e-172
Identity = 241/253 (95.26%), Postives = 247/253 (97.63%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLLT 759
            +TPILNLKPPAGISA QQRATLDL+QSMNRRH EARD+DDELSARIAAYELAFRMQTAAPEIVDLTQET AT KMYGLDDP TRDFGERCLLARRMVERGVRF+QLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHL+GLDHETLTYFHNGLDERLTGPAE+EIVK LLT
Sbjct:  234 KTPILNLKPPAGISAGQQRATLDLIQSMNRRHREARDQDDELSARIAAYELAFRMQTAAPEIVDLTQETGATQKMYGLDDPQTRDFGERCLLARRMVERGVRFVQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLMGLDHETLTYFHNGLDERLTGPAEIEIVKELLT 486
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A0A517RKM2_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RKM2_9PLAN)

HSP 1 Score: 478 bits (1230), Expect = 1.580e-166
Identity = 229/253 (90.51%), Postives = 241/253 (95.26%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLLT 759
            +TPILNLKPPA IS+RQQRATLDL+QSMNRRH E RDRDDELSARI+AYELAFRMQTAAPE+VDLTQET  TH MYGLDDP TRDFGERCLLARRM+ERGVRF+QLYSGDTVGWDAHSDVT+NHT YCRKTDQP+AALLKDL +RGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATD IGLRA EQ VHVNQFHATLLHL+GLDHETLTYFHNGLDERLTGPAEVE+VKGLLT
Sbjct:  234 KTPILNLKPPASISSRQQRATLDLIQSMNRRHYENRDRDDELSARISAYELAFRMQTAAPELVDLTQETKETHAMYGLDDPKTRDFGERCLLARRMIERGVRFVQLYSGDTVGWDAHSDVTRNHTTYCRKTDQPVAALLKDLNRRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDAIGLRAVEQKVHVNQFHATLLHLMGLDHETLTYFHNGLDERLTGPAEVEVVKGLLT 486
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A6C4Y7_9PLAN (Uncharacterized protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A6C4Y7_9PLAN)

HSP 1 Score: 471 bits (1212), Expect = 8.020e-164
Identity = 226/253 (89.33%), Postives = 243/253 (96.05%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLLT 759
            +TPILNLKPPA IS++QQRATLDL+QSMNRRHLEARD+DDEL+ARI+AYELAFRMQTAAPEIVDLTQET  TH MYGL+DP TRDFGERCLLARRM+ERGVRF+QLYSGDTVGWDAHSDVTKNHTAYC+KTDQP+AALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQG+GRDHNPWGY GWLAGAGITGGR+YGATD IGLR+ E  VHVN+FHATLLHLLGLDHE+LTYFHNGLDERLTGPAEVEIVKGLLT
Sbjct:  232 KTPILNLKPPASISSQQQRATLDLIQSMNRRHLEARDQDDELAARISAYELAFRMQTAAPEIVDLTQETQDTHAMYGLNDPQTRDFGERCLLARRMIERGVRFVQLYSGDTVGWDAHSDVTKNHTAYCKKTDQPVAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGRGRDHNPWGYSGWLAGAGITGGRSYGATDAIGLRSVENKVHVNEFHATLLHLLGLDHESLTYFHNGLDERLTGPAEVEIVKGLLT 484
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A0A2A2WI49_9BACT (Uncharacterized protein n=6 Tax=Planctomycetes TaxID=203682 RepID=A0A2A2WI49_9BACT)

HSP 1 Score: 410 bits (1053), Expect = 6.840e-140
Identity = 190/252 (75.40%), Postives = 224/252 (88.89%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLL 756
            +TPILNL PP+G+S  +QR+TLD +Q +N+ HL  R++DD+L+ARI AYELAFRMQ+AAPE VD +QE++AT  MYG+DD  TRDFGERCLLARRM++RGVR +Q+YSGDT GWDAH DV KNH+ YC KTD+P+ ALLKDLK+ GLL+DTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGW+AGAGI+GGRAYGATD +GLRAAE  VHVN+FHATLLHL+GLDH  LTYFHNGLDERLTGP+EV+IV+GLL
Sbjct:  219 KTPILNLAPPSGVSDLRQRSTLDFIQQLNQNHLIGREQDDDLAARIDAYELAFRMQSAAPEAVDFSQESAATLSMYGIDDKTTRDFGERCLLARRMIQRGVRMVQVYSGDTNGWDAHQDVDKNHSEYCAKTDKPVTALLKDLKRTGLLDDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWIAGAGISGGRAYGATDEVGLRAAEDRVHVNEFHATLLHLMGLDHRDLTYFHNGLDERLTGPSEVDIVEGLL 470
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A0A5C6B8I8_9BACT (Uncharacterized protein n=1 Tax=Stieleria varia TaxID=2528005 RepID=A0A5C6B8I8_9BACT)

HSP 1 Score: 405 bits (1042), Expect = 2.700e-138
Identity = 188/253 (74.31%), Postives = 221/253 (87.35%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLLT 759
            +TPILNL PP GIS  +QR+TLD VQ +N+RHL  R+ DD+L+ARI +YELAFRMQ AAPE VD +QE++ T  MYG+DD  TRDFGERCLLARRMV+RGVR +Q+YSGDT GWDAH DV +NHT YC KTD+P+AALL DLK+ GLLEDTLV+WCGEFGRMPMSEQGKGRDHNPWGY GW+AGAG++GGRAYGATD +GLRA E TVHVN+FHATLLHL+GLDH  LTY+HNGLDERLTGP+E+++V+GLLT
Sbjct:  213 KTPILNLAPPDGISDLRQRSTLDFVQQLNQRHLSGRESDDDLTARIKSYELAFRMQAAAPEAVDFSQESAETLSMYGIDDKTTRDFGERCLLARRMVQRGVRMVQVYSGDTNGWDAHKDVDQNHTEYCAKTDKPVAALLTDLKRTGLLEDTLVIWCGEFGRMPMSEQGKGRDHNPWGYSGWIAGAGVSGGRAYGATDEVGLRAVEDTVHVNEFHATLLHLMGLDHRDLTYYHNGLDERLTGPSEIDVVEGLLT 465
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A0A358N1J8_9BACT (DUF1501 domain-containing protein n=5 Tax=Bacteria TaxID=2 RepID=A0A358N1J8_9BACT)

HSP 1 Score: 398 bits (1022), Expect = 3.780e-135
Identity = 189/252 (75.00%), Postives = 215/252 (85.32%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLL 756
            +TPILNLKPPAGIS  QQR TLD +Q +N RHL  RD D+ELSARIAAYELAFRMQ+AAPE+ D + E++ T   YG+D P T+DFG+RCLLARRM+ERGVRF+Q+YSG+T GWDAH DV  NH  YC+KTDQPI+ALL DLKQ GLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGY GW+AGA + GGRAYGATD IGLRA +  VHVN+FHATLLHL+G+DH  L Y HNGLDERLTGPAEV++VKGLL
Sbjct:  221 KTPILNLKPPAGISESQQRGTLDFLQRLNERHLLKRDHDEELSARIAAYELAFRMQSAAPEVCDFSTESADTLSRYGVDHPSTQDFGQRCLLARRMLERGVRFVQVYSGNTNGWDAHKDVAANHGEYCKKTDQPISALLTDLKQSGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYSGWIAGASVDGGRAYGATDAIGLRAEKDRVHVNEFHATLLHLMGMDHRKLVYSHNGLDERLTGPAEVDVVKGLL 472
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A0A2G2J563_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2J563_9BACT)

HSP 1 Score: 395 bits (1016), Expect = 2.780e-134
Identity = 186/252 (73.81%), Postives = 218/252 (86.51%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLL 756
            ++PILNLKPP  I   QQRATLD VQS+N+ H + RD +D+L+ARI+AYELAFRMQTAAPEIVDLTQET+ T K+YG+D P++++FGERCLLARRM+ERGVRF+QLYSG+T GWDAH DV KNHT YC KTD+PIA LL DLK+ GL EDTL++WCGEFGRMPMSE+GKGRDHNPWGY  WLAGAGI GGRAYGATD IGLRA E  VHVN FHAT+LHLLGLD  +L+Y+HNGLDERL GP ++EIV+G+L
Sbjct:  219 KSPILNLKPPESIRPLQQRATLDFVQSLNQSHFKQRDSNDKLAARISAYELAFRMQTAAPEIVDLTQETAETKKLYGIDQPESKEFGERCLLARRMLERGVRFVQLYSGNTNGWDAHDDVLKNHTEYCNKTDKPIAGLLTDLKRSGLFEDTLIIWCGEFGRMPMSEKGKGRDHNPWGYSAWLAGAGIQGGRAYGATDDIGLRAVENKVHVNNFHATILHLLGLDPLSLSYYHNGLDERLIGPTDIEIVEGIL 470
[Close]
BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: UPI001E3C1DBE (DUF1501 domain-containing protein n=2 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI001E3C1DBE)

HSP 1 Score: 393 bits (1010), Expect = 2.660e-133
Identity = 184/253 (72.73%), Postives = 221/253 (87.35%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLLT 759
            +TPILNL  PAGIS ++QR+TLDL+   NRRH E RD DD+L+AR+ +YELAFRMQ+AAPE VDL+QE++AT   YG+D P TRDFG+RCLLARR++ERGVR +Q+YSGDT GWDAH DV +NHT YC +TD+P+AAL+KDLK+ GLL+DTLV+WCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGI+GGR YGATD IGLRA E TVHVN+FHATLLHL+GL+   L+Y HNGLDERL GP+EV++V+GLL+
Sbjct:  223 KTPILNLNSPAGISDQRQRSTLDLLSQFNRRHFEQRDSDDDLAARMESYELAFRMQSAAPEAVDLSQESAATLSHYGIDHPMTRDFGQRCLLARRLIERGVRIVQVYSGDTNGWDAHQDVDQNHTEYCARTDKPVAALIKDLKRSGLLDDTLVIWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGISGGRTYGATDDIGLRATEDTVHVNEFHATLLHLMGLNPLGLSYPHNGLDERLIGPSEVDVVEGLLS 475
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BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Match: A0A255RF53_9BACT (Uncharacterized protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A255RF53_9BACT)

HSP 1 Score: 387 bits (993), Expect = 5.970e-131
Identity = 180/252 (71.43%), Postives = 219/252 (86.90%), Query Frame = 1 
Query:    1 QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYELAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERGVRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLEDTLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIGLRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKGLL 756
            +TPILNL  P+GISA++QR++LD +  +NRRHL  RD DDEL+AR+ +YELAFRMQ+AAPE VDL+QET  T  +YG+D P+TRD+G+RCLLARR++ERGVR +Q+YSGDT GWDAH DV KNH+ YC +TD+P+AALLKDLK+ GLL+DTLV+WCGEFGRMPMSEQGKGRDHNPWGY GWLAGAGI GGR YGATD IGLRAAE TVHVN+FHATLLHL+GL+   L++ HNGLDERL GP+ V++V+GL+
Sbjct:  208 KTPILNLNTPSGISAQRQRSSLDFLNRLNRRHLSRRDFDDELAARMQSYELAFRMQSAAPEAVDLSQETEETLSLYGIDRPETRDYGQRCLLARRLIERGVRIVQVYSGDTNGWDAHEDVDKNHSEYCERTDKPVAALLKDLKRTGLLDDTLVIWCGEFGRMPMSEQGKGRDHNPWGYSGWLAGAGIRGGRTYGATDEIGLRAAEDTVHVNEFHATLLHLMGLNPLELSFPHNGLDERLIGPSHVDVVEGLI 459
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85046.19823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8BIP0_9PLAN9.100e-17898.02DUF1501 domain-containing protein n=2 Tax=Gimesia ... [more]
A0A517QBZ9_9PLAN1.320e-17295.26Uncharacterized protein n=10 Tax=Gimesia TaxID=164... [more]
A0A517RKM2_9PLAN1.580e-16690.51Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A6C4Y7_9PLAN8.020e-16489.33Uncharacterized protein n=9 Tax=Planctomycetaceae ... [more]
A0A2A2WI49_9BACT6.840e-14075.40Uncharacterized protein n=6 Tax=Planctomycetes Tax... [more]
A0A5C6B8I8_9BACT2.700e-13874.31Uncharacterized protein n=1 Tax=Stieleria varia Ta... [more]
A0A358N1J8_9BACT3.780e-13575.00DUF1501 domain-containing protein n=5 Tax=Bacteria... [more]
A0A2G2J563_9BACT2.780e-13473.81Uncharacterized protein n=1 Tax=Blastopirellula sp... [more]
UPI001E3C1DBE2.660e-13372.73DUF1501 domain-containing protein n=2 Tax=Roseicon... [more]
A0A255RF53_9BACT5.970e-13171.43Uncharacterized protein n=2 Tax=Pirellulaceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85046contigM-pyrifera_M_contig85046:2..763 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score474.9
Seed ortholog evalue2.3e-131
Seed eggNOG ortholog344747.PM8797T_20678
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF1501)
EggNOG OGs2IYDS@203682,COG4102@1,COG4102@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size762
Cds size762
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816758.718347-CDS-M-pyrifera_M_contig85046:1..7631622816758.718347-CDS-M-pyrifera_M_contig85046:1..763Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85046 2..763 +
1692278161.2774022-CDS-M-pyrifera_M_contig85046:1..7631692278161.2774022-CDS-M-pyrifera_M_contig85046:1..763Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85046 2..763 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85046.19823.1prot_M-pyrifera_M_contig85046.19823.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85046 2..763 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85046.19823.1

>prot_M-pyrifera_M_contig85046.19823.1 ID=prot_M-pyrifera_M_contig85046.19823.1|Name=mRNA_M-pyrifera_M_contig85046.19823.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
QTPILNLKPPAGISARQQRATLDLVQSMNRRHLEARDRDDELSARIAAYE
LAFRMQTAAPEIVDLTQETSATHKMYGLDDPDTRDFGERCLLARRMVERG
VRFIQLYSGDTVGWDAHSDVTKNHTAYCRKTDQPIAALLKDLKQRGLLED
TLVVWCGEFGRMPMSEQGKGRDHNPWGYCGWLAGAGITGGRAYGATDPIG
LRAAEQTVHVNQFHATLLHLLGLDHETLTYFHNGLDERLTGPAEVEIVKG
LLT*
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mRNA from alignment at M-pyrifera_M_contig85046:2..763+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85046.19823.1 ID=mRNA_M-pyrifera_M_contig85046.19823.1|Name=mRNA_M-pyrifera_M_contig85046.19823.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig85046:2..763+ (Macrocystis pyrifera P11B4 male)
CAGACGCCGATTCTGAATCTCAAACCCCCGGCCGGGATCTCTGCCCGCCA
GCAAAGGGCGACCCTGGATCTGGTCCAATCCATGAATCGACGCCACCTGG
AAGCCCGTGATCGGGACGACGAACTCTCGGCCCGGATCGCCGCCTATGAG
CTGGCTTTTCGCATGCAGACCGCGGCTCCGGAAATTGTCGATCTGACACA
GGAGACCTCAGCAACTCACAAAATGTACGGACTCGATGATCCAGACACGC
GTGATTTCGGCGAACGCTGTCTGCTGGCGCGACGCATGGTGGAGCGTGGC
GTGCGTTTCATTCAGCTTTACTCCGGCGATACCGTGGGCTGGGATGCACA
CAGCGATGTAACGAAGAATCATACCGCTTATTGCCGCAAGACCGATCAGC
CGATCGCAGCGCTGCTCAAGGATCTGAAGCAGCGGGGACTCCTGGAAGAC
ACGCTGGTGGTCTGGTGTGGCGAATTCGGTCGCATGCCGATGAGCGAGCA
GGGCAAAGGCCGCGATCACAATCCCTGGGGCTATTGTGGCTGGCTGGCCG
GTGCCGGTATCACGGGGGGCCGCGCTTACGGGGCCACCGATCCCATCGGC
TTACGTGCTGCGGAACAGACCGTGCACGTCAATCAGTTTCACGCGACCCT
CCTGCATCTGCTGGGACTCGATCATGAAACGCTGACCTATTTTCATAACG
GCCTGGATGAGCGTCTGACCGGTCCCGCGGAAGTTGAGATTGTGAAAGGA
CTGCTCACATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85046:2..763+

>mRNA_M-pyrifera_M_contig85046.19823.1 ID=mRNA_M-pyrifera_M_contig85046.19823.1|Name=mRNA_M-pyrifera_M_contig85046.19823.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig85046:2..763+ (Macrocystis pyrifera P11B4 male)
CAGACGCCGATTCTGAATCTCAAACCCCCGGCCGGGATCTCTGCCCGCCA
GCAAAGGGCGACCCTGGATCTGGTCCAATCCATGAATCGACGCCACCTGG
AAGCCCGTGATCGGGACGACGAACTCTCGGCCCGGATCGCCGCCTATGAG
CTGGCTTTTCGCATGCAGACCGCGGCTCCGGAAATTGTCGATCTGACACA
GGAGACCTCAGCAACTCACAAAATGTACGGACTCGATGATCCAGACACGC
GTGATTTCGGCGAACGCTGTCTGCTGGCGCGACGCATGGTGGAGCGTGGC
GTGCGTTTCATTCAGCTTTACTCCGGCGATACCGTGGGCTGGGATGCACA
CAGCGATGTAACGAAGAATCATACCGCTTATTGCCGCAAGACCGATCAGC
CGATCGCAGCGCTGCTCAAGGATCTGAAGCAGCGGGGACTCCTGGAAGAC
ACGCTGGTGGTCTGGTGTGGCGAATTCGGTCGCATGCCGATGAGCGAGCA
GGGCAAAGGCCGCGATCACAATCCCTGGGGCTATTGTGGCTGGCTGGCCG
GTGCCGGTATCACGGGGGGCCGCGCTTACGGGGCCACCGATCCCATCGGC
TTACGTGCTGCGGAACAGACCGTGCACGTCAATCAGTTTCACGCGACCCT
CCTGCATCTGCTGGGACTCGATCATGAAACGCTGACCTATTTTCATAACG
GCCTGGATGAGCGTCTGACCGGTCCCGCGGAAGTTGAGATTGTGAAAGGA
CTGCTCACATGACAGACGCCGATTCTGAATCTCAAACCCCCGGCCGGGAT
CTCTGCCCGCCAGCAAAGGGCGACCCTGGATCTGGTCCAATCCATGAATC
GACGCCACCTGGAAGCCCGTGATCGGGACGACGAACTCTCGGCCCGGATC
GCCGCCTATGAGCTGGCTTTTCGCATGCAGACCGCGGCTCCGGAAATTGT
CGATCTGACACAGGAGACCTCAGCAACTCACAAAATGTACGGACTCGATG
ATCCAGACACGCGTGATTTCGGCGAACGCTGTCTGCTGGCGCGACGCATG
GTGGAGCGTGGCGTGCGTTTCATTCAGCTTTACTCCGGCGATACCGTGGG
CTGGGATGCACACAGCGATGTAACGAAGAATCATACCGCTTATTGCCGCA
AGACCGATCAGCCGATCGCAGCGCTGCTCAAGGATCTGAAGCAGCGGGGA
CTCCTGGAAGACACGCTGGTGGTCTGGTGTGGCGAATTCGGTCGCATGCC
GATGAGCGAGCAGGGCAAAGGCCGCGATCACAATCCCTGGGGCTATTGTG
GCTGGCTGGCCGGTGCCGGTATCACGGGGGGCCGCGCTTACGGGGCCACC
GATCCCATCGGCTTACGTGCTGCGGAACAGACCGTGCACGTCAATCAGTT
TCACGCGACCCTCCTGCATCTGCTGGGACTCGATCATGAAACGCTGACCT
ATTTTCATAACGGCCTGGATGAGCGTCTGACCGGTCCCGCGGAAGTTGAG
ATTGTGAAAGGACTGCTCACATGA
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