mRNA_M-pyrifera_M_contig8500.19811.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8500.19811.1
Unique NamemRNA_M-pyrifera_M_contig8500.19811.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: D7FVD1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD1_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 1.890e-115
Identity = 188/244 (77.05%), Postives = 218/244 (89.34%), Query Frame = 1
Query:    1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREAASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGFHE 732
            QVK+WMAG++ARS +LS+IFGS+W+FGQMST+MRCKMSMVHEFEL M SMVDLKHKVAR LIK + CLQK+NVQ +HDRA+AMGDDDPLKPDYSRFL S KK +FSNA+ L HGHLEN SHWRD +  KAV KIQN+FRGK AR++AE +AKK AF CARA+A+ DTRQRIAA+IWKREAASGVGRLKWDAKVRMKQAKLRAAG +N+DRQ+VVEAII  SV+AAQ+GVM+RFDEIA++RGF E
Sbjct:  397 QVKTWMAGIIARSPKLSDIFGSSWSFGQMSTVMRCKMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVMHDRALAMGDDDPLKPDYSRFLHSDKKKSFSNAVSLSHGHLENLSHWRDTVRIKAVTKIQNLFRGKQARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKVRMKQAKLRAAG-ENVDRQQVVEAIIEESVQAAQDGVMERFDEIARDRGFDE 639          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A6H5K633_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K633_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 8.430e-92
Identity = 145/193 (75.13%), Postives = 172/193 (89.12%), Query Frame = 1
Query:    1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREAASGVGRLKWDAKV 579
            +VK+WMAG++ARS +LS+IFGS+W+FGQMST+MRC MSMVHEFEL M SM+DLKHKVAR LIK + CLQK+NVQ +HDRA+AMGDDDPLKPDYSRFL S +K +FSNA+ L+HGHLEN SHWRD +  KAV KIQN+FRGKLAR++AE++AKK AF CARA+A+ DTRQRIAA+IWKREAASGVGRLKWDAK 
Sbjct:  181 KVKAWMAGIIARSPKLSDIFGSSWSFGQMSTVMRCSMSMVHEFELSMISMIDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSDQKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAETMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKA 373          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A2R5GJD7_9STRA (F-box/LRR-repeat protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJD7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 9.380e-44
Identity = 97/248 (39.11%), Postives = 148/248 (59.68%), Query Frame = 1
Query:    1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGFHEGD 738
            Q  S M+ ++  S+ LS +F   W +  +S   R +MS + ++ELGM S+ DL  ++AR  +  +  L  +  Q +H+RA+AMG +DPLKPDY++F+   K    SN +PL+HG L N  +++  +   A + +Q  +R KL R+ AE   K+ AFF A  VAL ++R ++  +  KREA  A+ VGR+KWDA VRM+Q KLRA G +   R+EVV  +    V+ AQ  V + F+++  ERG    D
Sbjct:  606 QFSSCMSHLICISEDLSKVFNVPWAYANLSEWQRTRMSYIKKYELGMLSLRDLNKRIARLWVTYRPLLALEQKQTMHERALAMGRNDPLKPDYAKFMTRRKHKLQSNVVPLEHGGLGNILYYQSRVTYNAAMMVQAAWRSKLGRRRAEREVKRRAFFAAWRVALEESRAKVEREFAKREAQAANTVGRMKWDATVRMRQGKLRALG-QAFSREEVVALLTEEEVKVAQTSVDEEFEKMKLERGIKNDD 852          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A835YMZ6_9STRA (Clu domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMZ6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 3.190e-43
Identity = 92/245 (37.55%), Postives = 142/245 (57.96%), Query Frame = 1
Query:    1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA-ASGVGRLKWDAKVRMKQAKLRAAG--GKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726
            + K W+A +V R +RLS  FG+ W   + S +MR + +   + ELG+ ++ DLK+++AR   + +  L  +   A+H+RA+A GD DPLKPDYSRFL + ++   S A+PL HGHL +  HWR     +   K+QN++RG+ A                           +  D  +REA A+GV R++WDAKVR++QAK+RA+G  G  + R + +  ++  +  AA+  V +RFDEIA+ERG 
Sbjct:  489 EAKRWLAALVRRDRRLSEAFGAPWGAAEASALMRARTAPARQLELGLITLADLKYRLARDGARHRPQLDPERRLAVHERALARGDGDPLKPDYSRFLAAARRACSSAAVPLAHGHLGSLPHWRARAAQRGATKLQNLWRGRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXMELDFRRREAEAAGVARMRWDAKVRVRQAKMRASGSAGDGVTRADALREMLEETAAAAEADVRRRFDEIARERGI 733          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A662XGU1_9STRA (Clu domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGU1_9STRA)

HSP 1 Score: 153 bits (387), Expect = 8.360e-39
Identity = 87/236 (36.86%), Postives = 145/236 (61.44%), Query Frame = 1
Query:   25 VVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726
            +V RS+ L  + G  W +  +S  +   M+ +H++ LG+ ++ DLK+ VAR +++P++ L +     IH+RA+AMG++DPLK DYS++L   +    SN +PL HG   N  H+R  +  K+ +K+Q  +R K  R+ A   A+K AF+ AR +AL + RQ+I  +  +R+A  A  V ++K++AK+RMKQ KLR  G     R++V+  +   +V+ AQ+ V  RF E+ +E G+
Sbjct:  800 LVERSKYLCELLGHPWKYELLSRFVIQHMNAIHQYRLGLININDLKYTVARQMVQPREELTRWKKNEIHERALAMGENDPLKTDYSKYLPKRRTKLLSNVVPLDHGGYRNLLHYRMEVILKSAVKLQTSWRAKKGRRVARLAAEKQAFYHARGLALEEARQKIEKEWGERDAKPAHSVDKMKFEAKIRMKQVKLRTKGNA-FTREQVLALMTEEAVQVAQKEVENRFREMEEELGY 1034          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: W2NLG0_PHYPR (Clu domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2NLG0_PHYPR)

HSP 1 Score: 150 bits (378), Expect = 1.330e-37
Identity = 86/235 (36.60%), Postives = 143/235 (60.85%), Query Frame = 1
Query:   28 VARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726
            +  S+ L  + G +W + Q+S  +   MS + ++ LG+ ++ DLK+ VAR + +P++ L       IH+RA+AMG++DPLK DYS++L   +    SN +PL HG   N  H+R  +  ++ +K+Q  +R K  R+ A   A+K AF+ AR +AL ++RQ+I  +   R+A  A  V ++K +AK+RMKQ KLR  G  N  R++++  ++  SV+ AQ+ V  RF E+ +E G+
Sbjct:  784 IESSKYLCGLLGLSWKYQQLSRFVIQHMSPIQQYRLGLINVNDLKYTVARQMTQPREELSCWKKAIIHERALAMGENDPLKTDYSKYLPKRRSKLLSNVVPLDHGGYRNLLHYRMEVILRSAVKLQATWRAKKGRQVARLAAEKQAFYHARGLALEESRQKIEKEWSDRDAKPAHSVDKMKLEAKIRMKQVKLRTKGN-NFSREQILALMVEESVQIAQKEVENRFREMEEELGY 1017          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A5D6YCH9_9STRA (Clu domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCH9_9STRA)

HSP 1 Score: 148 bits (373), Expect = 6.190e-37
Identity = 87/246 (35.37%), Postives = 140/246 (56.91%), Query Frame = 1
Query:    1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGFHE 732
            + + +    V  S+ L  + G  W +  +S  +   MS  H+F LG+ ++ DLK  VAR +++P+K L +     +H+RA+AMG++DPLK DYS++L   +    SN +PL HG   N  H R  +  +A +K+Q  +R +  R+ A   A+K AF+ AR VAL + R  + ++   R+A  A  V ++K++AK+RMKQ KLR  G     R++V   +   +V+ AQ  V  RF E+ +E G+ E
Sbjct:  642 EFEKYCVETVETSKYLCELLGHPWKYEHLSRFVVQHMSATHQFRLGLINLNDLKFAVARQMVQPRKELSRWKKNVVHERALAMGENDPLKTDYSKYLPKRRAKLLSNVVPLDHGGYRNLLHHRMEVILRATVKLQTTWRARKGRQVARLAAEKQAFYHARGVALEEARAAVESEWRARDARPAHSVEKMKFEAKIRMKQVKLRTKGNA-FSREQVAALLTEEAVQLAQREVENRFREMEEELGYLE 886          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A329RIW9_9STRA (Clu domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RIW9_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.120e-36
Identity = 86/232 (37.07%), Postives = 139/232 (59.91%), Query Frame = 1
Query:   37 SQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726
            S+ L  + G  W + Q+S  +   MS + ++ LG+ ++ DLK+ +AR + +P++ L +     IH+RAVAMG++DPLK DYS++L   +    SN +PL HG   N  H+R  +  ++ +K+Q  +R K  R+ A   A+K AF+ AR +AL + RQRI  +   R+A  A  V ++K +AK+RMKQ KLR  G     R++V+  +   +V+ AQ+ V  RF E+ +E G+
Sbjct:  796 SKYLCELLGLPWKYQQLSRFVIQHMSPIQQYRLGLINVNDLKYTLARQMTQPREELSRWKKAIIHERAVAMGENDPLKTDYSKYLPKRRSKLLSNVVPLDHGGYRNLLHYRMEVIVRSAVKLQATWRAKKGRQVARLAAEKQAFYHARGLALDEARQRIEKEWSDRDAKPAHSVDKMKLEAKIRMKQVKLRTKGN-TFSREQVLALMTEEAVQIAQKEVENRFREMEEELGY 1026          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A6A3JP86_9STRA (Clu domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JP86_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.120e-36
Identity = 84/244 (34.43%), Postives = 145/244 (59.43%), Query Frame = 1
Query:    1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726
            +  S+    +  S+ L  + G  W + Q+S  +  +MS +H++ LG+ ++ DLK+ +AR L +P++ L +     IH+RA+AMG++DPLK DYS++L   +    SN +PL HG   N  H+R  +  ++ +++Q  +R +  R+ A   A+K AF+ AR +AL + R  +  +   R+A  A  V ++K++AK+RMKQ KLR  G     R++V+  +   +V+AAQ+ V  RF E+ +E G+
Sbjct:  776 EFNSYCIETIEGSKYLCELLGHPWKYQQLSRFVVQQMSTIHQYRLGLININDLKYALARQLTQPREELSQWKKAIIHERALAMGENDPLKTDYSKYLPRRRAKLLSNVVPLDHGGYRNLLHYRMEVILRSAVRLQTSWRARKGRQIARLAAEKQAFYHARGLALEEARNTVEKEWSDRDAKPAHSVDKMKFEAKIRMKQVKLRTKGNA-FSREQVLALMTEDAVQAAQKDVENRFREMEEELGY 1018          
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: G4YXI1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YXI1_PHYSP)

HSP 1 Score: 146 bits (368), Expect = 2.640e-36
Identity = 83/232 (35.78%), Postives = 141/232 (60.78%), Query Frame = 1
Query:   37 SQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726
            S+ L  + G  W + Q+S  +   MS +H++ LG+ ++ DLK+ +AR + +P++ L +     IH+RA+AMG++DPLK DYS++L   +    SN +PL HG   N  H+R  +  ++ +++Q  +R +  R+ A   A+K AF+ AR +AL + RQ +  +   R+A  A  V ++K++AK+RMKQ KLR  G     R++V+  +   +V+AAQ+ V  RF E+ +E G+
Sbjct:  711 SKYLCELLGHPWKYQQLSRFVVQHMSAIHQYRLGLININDLKYALARQMTQPREELSQWKKAIIHERALAMGENDPLKTDYSKYLPRRQAKLLSNVVPLDHGGYRNLLHYRMEVILRSAVRLQTTWRARKGRQIARLAAEKQAFYHARGLALEEARQTVEREWSDRDAKPAHSVDKMKFEAKIRMKQVKLRTKGNA-FSREQVLSLMTEEAVQAAQKEVENRFREMEEELGY 941          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVD1_ECTSI1.890e-11577.05Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K633_9PHAE8.430e-9275.13Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2R5GJD7_9STRA9.380e-4439.11F-box/LRR-repeat protein 2 n=1 Tax=Hondaea ferment... [more]
A0A835YMZ6_9STRA3.190e-4337.55Clu domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A662XGU1_9STRA8.360e-3936.86Clu domain-containing protein n=2 Tax=Nothophytoph... [more]
W2NLG0_PHYPR1.330e-3736.60Clu domain-containing protein n=10 Tax=Phytophthor... [more]
A0A5D6YCH9_9STRA6.190e-3735.37Clu domain-containing protein n=1 Tax=Pythium bras... [more]
A0A329RIW9_9STRA2.120e-3637.07Clu domain-containing protein n=1 Tax=Phytophthora... [more]
A0A6A3JP86_9STRA2.120e-3634.43Clu domain-containing protein n=7 Tax=Phytophthora... [more]
G4YXI1_PHYSP2.640e-3635.78Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8500contigM-pyrifera_M_contig8500:7711..8798 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.0
Seed ortholog evalue1.7e-99
Seed eggNOG ortholog2880.D7FVD1
KEGG koko:K10268
Hectar predicted targeting categoryother localisation
EggNOG free text desc.modulation by host of viral RNA genome replication
EggNOG OGsKOG4341@1,KOG4341@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Exons3
Model size738
Cds size723
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8500.19811.1prot_M-pyrifera_M_contig8500.19811.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8500 7726..8798 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816758.1533344-UTR-M-pyrifera_M_contig8500:7710..77251622816758.1533344-UTR-M-pyrifera_M_contig8500:7710..7725Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8500 7711..7725 +
1692278160.9888294-UTR-M-pyrifera_M_contig8500:7710..77251692278160.9888294-UTR-M-pyrifera_M_contig8500:7710..7725Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8500 7711..7725 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816758.1704056-CDS-M-pyrifera_M_contig8500:7725..78781622816758.1704056-CDS-M-pyrifera_M_contig8500:7725..7878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8500 7726..7878 +
1692278161.003586-CDS-M-pyrifera_M_contig8500:7725..78781692278161.003586-CDS-M-pyrifera_M_contig8500:7725..7878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8500 7726..7878 +
1622816758.1824172-CDS-M-pyrifera_M_contig8500:8067..84301622816758.1824172-CDS-M-pyrifera_M_contig8500:8067..8430Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8500 8068..8430 +
1692278161.017478-CDS-M-pyrifera_M_contig8500:8067..84301692278161.017478-CDS-M-pyrifera_M_contig8500:8067..8430Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8500 8068..8430 +
1622816758.1958182-CDS-M-pyrifera_M_contig8500:8591..87981622816758.1958182-CDS-M-pyrifera_M_contig8500:8591..8798Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8500 8592..8798 +
1692278161.026747-CDS-M-pyrifera_M_contig8500:8591..87981692278161.026747-CDS-M-pyrifera_M_contig8500:8591..8798Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8500 8592..8798 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8500.19811.1

>prot_M-pyrifera_M_contig8500.19811.1 ID=prot_M-pyrifera_M_contig8500.19811.1|Name=mRNA_M-pyrifera_M_contig8500.19811.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
MAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKH
KVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAF
SNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHA
FFCARAVALHDTRQRIAADIWKREAASGVGRLKWDAKVRMKQAKLRAAGG
KNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGFHEGD
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mRNA from alignment at M-pyrifera_M_contig8500:7711..8798+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8500.19811.1 ID=mRNA_M-pyrifera_M_contig8500.19811.1|Name=mRNA_M-pyrifera_M_contig8500.19811.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1088bp|location=Sequence derived from alignment at M-pyrifera_M_contig8500:7711..8798+ (Macrocystis pyrifera P11B4 male)
CAGGTCAAGTCCTGGATGGCAGGAGTTGTTGCTCGTTCCCAAAGGTTGTC GAACATCTTCGGATCAAACTGGACTTTCGGGCAAATGAGCACTATTATGA GATGCAAGATGAGCATGGTGCACGAATTCGAGCTGGGCATGACCAGCATG GTCGACTTAAAACATAAGGTGAGGCAAAGTTAATCCTCATCGTGATGGTG ATACGAAGCTCGCTAATTATCTACTAATTTGTCACCGTGAACACCTACCA TGACCAACCACTTTCTCCCATGGTTTTCCCGTGCTGTTCTGTTCAACACG CCGCGTGCTCTTCGCAAAATATCCCTGACCGGAGCGTCGGCGTTTTTCCC TCGGAAGGTGGCACGCGCTCTGATAAAACCCCAAAAATGCCTGCAAAAAG ACAACGTTCAAGCCATCCATGACCGGGCAGTAGCTATGGGCGACGACGAC CCCTTAAAGCCGGATTATTCGCGTTTTCTACGTTCCGGCAAAAAGACAGC CTTCTCCAATGCGATCCCCCTTCAACATGGGCACCTCGAGAACTACTCCC ACTGGCGAGACGTCATTGGAGCCAAAGCGGTGATCAAGATTCAAAACATA TTTCGCGGAAAGCTGGCGCGAAAATCTGCAGAATCGATTGCGAAGAAGCA CGCCTTCTTTTGTGCACGAGCGGTGGCACTGCATGATACTCGCCAACGCA TTGCGGCCGACATTTGGAAGGTATTTTCGTTTCGCGCATTGTCTTCAATT AATAAAGTCGCTTGGTCCCAAAAACCTCCTTCAGTGGTAGTGACGTGCGC ACTACCGTAGTTCCGGCAAGTTTTTCTCTCAATTGCACGATGCCACCCTT CCTAAACGAATCCTACCTGCCCTACTCGCAGCGAGAAGCAGCATCCGGCG TAGGACGGCTAAAGTGGGATGCAAAGGTGCGTATGAAGCAAGCTAAGCTT CGAGCGGCAGGGGGAAAAAACATGGACCGCCAAGAAGTGGTGGAAGCGAT TATAGCGGCAAGCGTTGAGGCAGCTCAAGAGGGAGTGATGCAGCGTTTTG ACGAAATTGCAAAGGAACGTGGATTCCACGAGGGTGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8500:7711..8798+

>mRNA_M-pyrifera_M_contig8500.19811.1 ID=mRNA_M-pyrifera_M_contig8500.19811.1|Name=mRNA_M-pyrifera_M_contig8500.19811.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig8500:7711..8798+ (Macrocystis pyrifera P11B4 male)
ATGGCAGGAGTTGTTGCTCGTTCCCAAAGGTTGTCGAACATCTTCGGATC
AAACTGGACTTTCGGGCAAATGAGCACTATTATGAGATGCAAGATGAGCA
TGGTGCACGAATTCGAGCTGGGCATGACCAGCATGGTCGACTTAAAACAT
AAGATGGCAGGAGTTGTTGCTCGTTCCCAAAGGTTGTCGAACATCTTCGG
ATCAAACTGGACTTTCGGGCAAATGAGCACTATTATGAGATGCAAGATGA
GCATGGTGCACGAATTCGAGCTGGGCATGACCAGCATGGTCGACTTAAAA
CATAAGGTGGCACGCGCTCTGATAAAACCCCAAAAATGCCTGCAAAAAGA
CAACGTTCAAGCCATCCATGACCGGGCAGTAGCTATGGGCGACGACGACC
CCTTAAAGCCGGATTATTCGCGTTTTCTACGTTCCGGCAAAAAGACAGCC
TTCTCCAATGCGATCCCCCTTCAACATGGGCACCTCGAGAACTACTCCCA
CTGGCGAGACGTCATTGGAGCCAAAGCGGTGATCAAGATTCAAAACATAT
TTCGCGGAAAGCTGGCGCGAAAATCTGCAGAATCGATTGCGAAGAAGCAC
GCCTTCTTTTGTGCACGAGCGGTGGCACTGCATGATACTCGCCAACGCAT
TGCGGCCGACATTTGGAAGGTGGCACGCGCTCTGATAAAACCCCAAAAAT
GCCTGCAAAAAGACAACGTTCAAGCCATCCATGACCGGGCAGTAGCTATG
GGCGACGACGACCCCTTAAAGCCGGATTATTCGCGTTTTCTACGTTCCGG
CAAAAAGACAGCCTTCTCCAATGCGATCCCCCTTCAACATGGGCACCTCG
AGAACTACTCCCACTGGCGAGACGTCATTGGAGCCAAAGCGGTGATCAAG
ATTCAAAACATATTTCGCGGAAAGCTGGCGCGAAAATCTGCAGAATCGAT
TGCGAAGAAGCACGCCTTCTTTTGTGCACGAGCGGTGGCACTGCATGATA
CTCGCCAACGCATTGCGGCCGACATTTGGAAGCGAGAAGCAGCATCCGGC
GTAGGACGGCTAAAGTGGGATGCAAAGGTGCGTATGAAGCAAGCTAAGCT
TCGAGCGGCAGGGGGAAAAAACATGGACCGCCAAGAAGTGGTGGAAGCGA
TTATAGCGGCAAGCGTTGAGGCAGCTCAAGAGGGAGTGATGCAGCGTTTT
GACGAAATTGCAAAGGAACGTGGATTCCACGAGGGTGATCGAGAAGCAGC
ATCCGGCGTAGGACGGCTAAAGTGGGATGCAAAGGTGCGTATGAAGCAAG
CTAAGCTTCGAGCGGCAGGGGGAAAAAACATGGACCGCCAAGAAGTGGTG
GAAGCGATTATAGCGGCAAGCGTTGAGGCAGCTCAAGAGGGAGTGATGCA
GCGTTTTGACGAAATTGCAAAGGAACGTGGATTCCACGAGGGTGAT
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