mRNA_M-pyrifera_M_contig8496.19802.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: D7FRF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF4_ECTSI) HSP 1 Score: 110 bits (274), Expect = 7.910e-26 Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVNYLTAPKPKTYPIGTFKFEA 189 MVF GQDAWRKHPMLTGCYKRPFPGLG A+ +FAGYCV+DG + + TAP Y GTFKFEA Sbjct: 1 MVFGGQDAWRKHPMLTGCYKRPFPGLGIALGLFAGYCVLDGTIKFATAPTKDLYAPGTFKFEA 63
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A662XPS6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPS6_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 8.550e-11 Identity = 35/66 (53.03%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVNYLTA----PKPKTYPIGTFKFE 186 MV A QDAWRKHP +TGC K+PF GLG A AIF Y VVD + + P+ P G FKFE Sbjct: 1 MVLAHQDAWRKHPFITGCGKKPFTGLGMASAIFGVYLVVDLITSRSSPHDPHPQMDYIPRGKFKFE 66
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: K3WAK3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAK3_GLOUD) HSP 1 Score: 67.0 bits (162), Expect = 2.430e-10 Identity = 28/40 (70.00%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVD 120 MV A QDAWRKHP ++GC K+PFPGLG A AIF Y VVD Sbjct: 1 MVLAHQDAWRKHPFISGCAKKPFPGLGIASAIFGAYLVVD 40
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A024TWK1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWK1_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.760e-10 Identity = 28/44 (63.64%), Postives = 29/44 (65.91%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN 132 MV AGQDAWR HP LTGC K+P PG G A IFA Y VD N Sbjct: 1 MVLAGQDAWRSHPFLTGCIKKPVPGFGMAAGIFAVYLTVDTIAN 44
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: W4GNJ0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNJ0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 9.990e-10 Identity = 28/44 (63.64%), Postives = 29/44 (65.91%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN 132 MV AGQDAWR HP LTGC K+P PG G A IFA Y VD N Sbjct: 25 MVLAGQDAWRSHPFLTGCIKKPIPGFGIAAGIFAVYLTVDTISN 68
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A1V9Y7Y0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7Y0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.790e-9 Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN 132 MV A QDAWRKHP L+ C K+PFPGLG A IF+ Y VVD Sbjct: 1 MVLAHQDAWRKHPFLSNCSKKPFPGLGIAAGIFSVYLVVDAVTG 44
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A3F2RSI1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSI1_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 8.780e-9 Identity = 32/70 (45.71%), Postives = 38/70 (54.29%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN--------YLTAPKPKTYPIGTFKFE 186 MV A QDAWR HP ++ C K+PF GLG A AIF Y VD N + T P+ P G FK+E Sbjct: 1 MVLAHQDAWRSHPFISNCAKKPFTGLGLASAIFGVYLAVDTINNRFKSHPDEHSTHPEMDYVPGGKFKYE 70
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A2D4BKS1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKS1_PYTIN) HSP 1 Score: 62.4 bits (150), Expect = 1.060e-8 Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN 132 MV A QDAWRKHP +TGC K+PF GLG A AIF Y V D + Sbjct: 1 MVLAHQDAWRKHPFITGCAKKPFTGLGTASAIFGVYLVFDAITS 44
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A3R7G059_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G059_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.530e-8 Identity = 32/70 (45.71%), Postives = 38/70 (54.29%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN--------YLTAPKPKTYPIGTFKFE 186 MV A QDAWR HP ++ C K+PF GLG A AIF Y VD N + T P+ P G FK+E Sbjct: 1 MVLAHQDAWRSHPFISNCAKKPFTGLGLASAIFGVYLAVDTINNRFKSHPDEHSTHPEMDYVPGGKFKYE 70
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A6A3NMB4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NMB4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.690e-8 Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 1 Query: 1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVNYLTA--------PKPKTYPIGTFKFE 186 MV A QDAWR HP ++GC K+PF GLG A AIF Y VVD ++ P+ P G F++E Sbjct: 32 MVLAHQDAWRSHPFISGCAKKPFTGLGLASAIFGVYLVVDTITTRFSSHGKEGGAHPEMDYVPRGKFQYE 101 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8496.19802.1 >prot_M-pyrifera_M_contig8496.19802.1 ID=prot_M-pyrifera_M_contig8496.19802.1|Name=mRNA_M-pyrifera_M_contig8496.19802.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVNYLTAPKback to top mRNA from alignment at M-pyrifera_M_contig8496:2533..7668+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8496.19802.1 ID=mRNA_M-pyrifera_M_contig8496.19802.1|Name=mRNA_M-pyrifera_M_contig8496.19802.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5136bp|location=Sequence derived from alignment at M-pyrifera_M_contig8496:2533..7668+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8496:2533..7668+ >mRNA_M-pyrifera_M_contig8496.19802.1 ID=mRNA_M-pyrifera_M_contig8496.19802.1|Name=mRNA_M-pyrifera_M_contig8496.19802.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig8496:2533..7668+ (Macrocystis pyrifera P11B4 male)back to top |