mRNA_M-pyrifera_M_contig84951.19798.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84951.19798.1
Unique NamemRNA_M-pyrifera_M_contig84951.19798.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A3D5D994_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5D994_9GAMM)

HSP 1 Score: 481 bits (1237), Expect = 8.350e-171
Identity = 243/257 (94.55%), Postives = 251/257 (97.67%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAF+GLDKIIRDRSEKGGIGFSAEVKS DDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEE+QLVQIL EPKNALTKQY RLFEME C+LEFREDAL AVA+KAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEG+I+GESKPL+IYEGSD+ KAASD
Sbjct:   16 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFSGLDKIIRDRSEKGGIGFSAEVKSKDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEESQLVQILVEPKNALTKQYARLFEMEDCDLEFREDALHAVAKKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGSITGESKPLVIYEGSDISKAASD 272
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A351MD63_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MD63_9GAMM)

HSP 1 Score: 439 bits (1128), Expect = 7.320e-152
Identity = 218/257 (84.82%), Postives = 240/257 (93.39%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDVEKAQ GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV+T+NILF+CGGAFAGL+++IRDRSEKGGIGFSAEVKS DDKK+  ++L  VEPEDLI+YGLIPEF+GRLPVVAVL EL+E QL+QILTEPKNAL KQ+ RLFEMEGCELE R DALRAVARKAVERKTGARGLRSI+E NLLD MY+LPS+  VAKVV+D+ AISGESKPLIIYEG+++PKAASD
Sbjct:  169 QKCDYDVEKAQAGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVNTANILFICGGAFAGLERVIRDRSEKGGIGFSAEVKSKDDKKSANDLLPTVEPEDLIKYGLIPEFIGRLPVVAVLHELDEAQLIQILTEPKNALVKQFQRLFEMEGCELEIRNDALRAVARKAVERKTGARGLRSIMEGNLLDIMYDLPSMKRVAKVVLDDSAISGESKPLIIYEGTEVPKAASD 425
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A1G0K8G9_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K8G9_9GAMM)

HSP 1 Score: 438 bits (1127), Expect = 1.080e-151
Identity = 214/257 (83.27%), Postives = 239/257 (93.00%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT+ASVPPQGGRKHPQQEFLQV+T+NILF+CGGAF GLD++IRDRSEKGGIGFSAEVKS DDKK  G++L QVEPEDLI+YGLIPEFVGRLPVVA LDEL+E QLV+IL EP+NA+TKQY RLFEMEG ++EFREDALRAVARKA++RKTGARGLRSI+E  LLDTMY+LPS+ NV+KVV+DEG I G  +PLIIY G+D+PKAASD
Sbjct:  170 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGGRKHPQQEFLQVNTTNILFICGGAFGGLDRVIRDRSEKGGIGFSAEVKSKDDKKAMGDLLRQVEPEDLIKYGLIPEFVGRLPVVATLDELDEAQLVKILLEPRNAITKQYARLFEMEGADIEFREDALRAVARKAMDRKTGARGLRSILEHILLDTMYDLPSMSNVSKVVIDEGVIVGNGRPLIIYAGTDIPKAASD 426
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A849MJY5_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A849MJY5_9PROT)

HSP 1 Score: 436 bits (1121), Expect = 8.770e-151
Identity = 213/257 (82.88%), Postives = 240/257 (93.39%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDV+KAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV+T+NILF+CGGAFAGLD+IIR+RSEKGGIGFSAEVK  DDKK+  E++H VEPEDLI+YGLIPEFVGRLPV A L EL+E QL+QIL EPKNA+TKQY RLF+MEGC+LEFR+DALRAVARK++ERKTGARGLRSI+E  LLDTMY+LPS+DNV KVV+DEG I+GES+PL+IYEGS+M K AS+
Sbjct:  170 QKCDYDVDKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVNTANILFICGGAFAGLDRIIRERSEKGGIGFSAEVKGKDDKKSVSEVIHTVEPEDLIKYGLIPEFVGRLPVAATLSELDEEQLLQILLEPKNAITKQYTRLFDMEGCDLEFRDDALRAVARKSMERKTGARGLRSIMENVLLDTMYDLPSMDNVTKVVIDEGVINGESEPLMIYEGSEMSKVASE 426
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A1Z8WRH5_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WRH5_9GAMM)

HSP 1 Score: 434 bits (1116), Expect = 4.550e-150
Identity = 215/257 (83.66%), Postives = 241/257 (93.77%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDVE+AQ GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILF+CGGAFAGLDKI+R+RSEKGGIGFSAEVK+ ++K ++ E+LH VEPEDLIRYGLIPEFVGRLPV+AVL+EL++ QLV+IL EPKNALTKQY RLFEME C LEFR++AL AVA+KAVERKTGARGLRSI+E++LLDTMYELPSL+NV+KVVVDE ++SGESKPLII+E S   KAASD
Sbjct:  167 QKCDYDVERAQNGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKIVRERSEKGGIGFSAEVKTKNEKISSSEVLHSVEPEDLIRYGLIPEFVGRLPVMAVLNELDQAQLVEILLEPKNALTKQYNRLFEMESCSLEFRDEALEAVAKKAVERKTGARGLRSILEESLLDTMYELPSLNNVSKVVVDEASVSGESKPLIIFENSSPAKAASD 423
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: S6CG91_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=S6CG91_9GAMM)

HSP 1 Score: 431 bits (1109), Expect = 5.450e-149
Identity = 215/257 (83.66%), Postives = 237/257 (92.22%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILF+ GGAFAGLDK+IR+RSEKGGIGFSAEV S ++K+  GE+LH+VEPEDLI YGLIPEFVGRLPVVA L+EL+E  LVQILTEPKNAL KQY RLFEMEG ELEFR+DALRA+ARKA+ERKTGARGLR+I+EQ LLDTMY+LPSL NV+KVV+DE  + GES+PLII+EG+D   AASD
Sbjct:  168 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIRNRSEKGGIGFSAEVHSKEEKRNLGEILHEVEPEDLISYGLIPEFVGRLPVVATLEELDEEALVQILTEPKNALVKQYQRLFEMEGAELEFRDDALRAIARKAMERKTGARGLRTILEQILLDTMYDLPSLKNVSKVVIDESVVQGESEPLIIFEGADQQMAASD 424
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A2E2BA72_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E2BA72_9GAMM)

HSP 1 Score: 429 bits (1103), Expect = 4.600e-148
Identity = 208/257 (80.93%), Postives = 236/257 (91.83%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT+ASVPPQGGRKHPQQEFLQVDTSNILF+CGGAFAGLD+++RDRSEK G+GFSA+VK   +KKT+ E+  Q+EPEDL++YGLIPEFVGRLPV+AVLDEL+  QLVQIL EPKN+LTKQY +LFEME CELEFR+DAL+AVA +A+ERK+GARGLRSI+E+NLLDTMYELPSL+N  KVVVDE AI GE  PL+IYE +D+ KAASD
Sbjct:  169 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDRVVRDRSEKSGMGFSADVKGEAEKKTSSELFGQIEPEDLVKYGLIPEFVGRLPVLAVLDELDVEQLVQILVEPKNSLTKQYAKLFEMESCELEFRDDALKAVAERALERKSGARGLRSILEKNLLDTMYELPSLENATKVVVDESAIKGEGNPLVIYENADVSKAASD 425
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A1G0K5J4_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A1G0K5J4_9GAMM)

HSP 1 Score: 429 bits (1102), Expect = 7.230e-148
Identity = 210/259 (81.08%), Postives = 241/259 (93.05%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPK--AASD 771
            QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV+T+NILF+CGGAF GLD+IIRDRSEKGGIGF+AE+ S +DKK+  ++L  VEPEDLI+YGLIPEFVGRLPV+A LDEL+E QL+QIL EPKNA+TKQY RLFEMEGCE+EFREDALR VAR+++ERKTGARGLRSI+E+ LLDTMY+LPS++NV KVVVD G I+GES+PL+IYEG+++PK  AA+D
Sbjct:  170 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVNTANILFICGGAFGGLDRIIRDRSEKGGIGFAAEITSLEDKKSISQLLQNVEPEDLIKYGLIPEFVGRLPVIATLDELDEKQLMQILLEPKNAITKQYARLFEMEGCEIEFREDALRKVARRSMERKTGARGLRSILEKVLLDTMYDLPSMENVTKVVVDAGVINGESRPLVIYEGTEIPKSKAAAD 428
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A1G0JHF8_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JHF8_9GAMM)

HSP 1 Score: 428 bits (1100), Expect = 1.360e-147
Identity = 214/257 (83.27%), Postives = 235/257 (91.44%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV+T+NILF+CGGAFAGLDKIIR+RSEK GIGFSAEVKS  DKK+  ++L  VEPEDLI+YGLIPEFVGRLPVVA LDEL+E QLV+IL EP+NALTKQY RLFEMEG  +EFREDALRAVA K++ERKTGARGLRSI+E  LLDTMY+LPSLD ++K+VVDE  I+GESKPL+IYEG DM KAA D
Sbjct:  170 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVNTTNILFICGGAFAGLDKIIRERSEKSGIGFSAEVKSIHDKKSMSQLLQTVEPEDLIKYGLIPEFVGRLPVVATLDELDEAQLVKILVEPRNALTKQYARLFEMEGTHIEFREDALRAVACKSMERKTGARGLRSIMESVLLDTMYDLPSLDKISKIVVDEAVINGESKPLLIYEGKDMQKAAPD 426
[Close]
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Match: A0A7C1Y1F9_9GAMM (ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1Y1F9_9GAMM)

HSP 1 Score: 427 bits (1098), Expect = 2.640e-147
Identity = 212/257 (82.49%), Postives = 234/257 (91.05%), Query Frame = 1 
Query:    1 QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGGIGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDELEETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKTGARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSDMPKAASD 771
            QKCDYDVE+AQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILF+CGGAFAGLDKIIRDRSEKGGIGF+AEV+S + +K+  E+LH VEPEDLI++GLIPEFVGRLPVVA L EL+   LVQILTEPKNALTKQY +LFEMEGCELEFREDALRAVARKA+ERKTGARGLRSI+EQ LLDTMY+LPS+DNV KVV+DE  I G  +P++IYEG +   A+ D
Sbjct:  168 QKCDYDVERAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKIIRDRSEKGGIGFAAEVRSKESQKSISEILHTVEPEDLIKFGLIPEFVGRLPVVATLTELDTDALVQILTEPKNALTKQYAKLFEMEGCELEFREDALRAVARKAMERKTGARGLRSILEQVLLDTMYDLPSMDNVEKVVIDENVIDGTGEPILIYEGVEQRAASLD 424
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84951.19798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5D994_9GAMM8.350e-17194.55ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A351MD63_9GAMM7.320e-15284.82ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A1G0K8G9_9GAMM1.080e-15183.27ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A849MJY5_9PROT8.770e-15182.88ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A1Z8WRH5_9GAMM4.550e-15083.66ATP-dependent Clp protease ATP-binding subunit Clp... [more]
S6CG91_9GAMM5.450e-14983.66ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A2E2BA72_9GAMM4.600e-14880.93ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A1G0K5J4_9GAMM7.230e-14881.08ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A1G0JHF8_9GAMM1.360e-14783.27ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A7C1Y1F9_9GAMM2.640e-14782.49ATP-dependent Clp protease ATP-binding subunit Clp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84951contigM-pyrifera_M_contig84951:97..870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score417.9
Seed ortholog evalue3.4e-114
Seed eggNOG ortholog1134474.O59_001661
Preferred nameclpX
KEGG koko:K03544
KEGG Pathwayko04112,map04112
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369
EggNOG free text desc.ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EggNOG OGs1FH5H@10,1MVQK@1224,1RN9N@1236,COG1219@1,COG1219@2
COG Functional cat.O
Best tax levelCellvibrio
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons1
Model size774
Cds size774
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816757.2538972-CDS-M-pyrifera_M_contig84951:96..8701622816757.2538972-CDS-M-pyrifera_M_contig84951:96..870Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84951 97..870 -
1692278160.3729696-CDS-M-pyrifera_M_contig84951:96..8701692278160.3729696-CDS-M-pyrifera_M_contig84951:96..870Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84951 97..870 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84951.19798.1prot_M-pyrifera_M_contig84951.19798.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84951 97..870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84951.19798.1

>prot_M-pyrifera_M_contig84951.19798.1 ID=prot_M-pyrifera_M_contig84951.19798.1|Name=mRNA_M-pyrifera_M_contig84951.19798.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=258bp
QKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE
GTVASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKIIRDRSEKGG
IGFSAEVKSNDDKKTTGEMLHQVEPEDLIRYGLIPEFVGRLPVVAVLDEL
EETQLVQILTEPKNALTKQYGRLFEMEGCELEFREDALRAVARKAVERKT
GARGLRSIIEQNLLDTMYELPSLDNVAKVVVDEGAISGESKPLIIYEGSD
MPKAASD*
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mRNA from alignment at M-pyrifera_M_contig84951:97..870-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84951.19798.1 ID=mRNA_M-pyrifera_M_contig84951.19798.1|Name=mRNA_M-pyrifera_M_contig84951.19798.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig84951:97..870- (Macrocystis pyrifera P11B4 male)
CAGAAATGTGATTACGACGTCGAAAAAGCGCAAACCGGCATCGTCTACAT
CGACGAAATAGACAAGATTTCGCGTAAATCCGACAACCCCTCGATCACCC
GTGACGTCTCGGGCGAAGGCGTACAGCAGGCACTGCTGAAGCTGATCGAA
GGTACGGTCGCTTCCGTACCCCCGCAGGGCGGGCGTAAGCATCCGCAGCA
GGAATTCCTCCAGGTCGACACGTCGAACATCCTGTTTGTTTGCGGCGGTG
CGTTCGCCGGGCTCGACAAGATCATCCGCGACCGCTCGGAAAAGGGCGGG
ATCGGGTTCTCGGCCGAGGTCAAAAGCAATGACGACAAGAAAACCACCGG
GGAAATGCTCCACCAGGTGGAACCTGAAGACCTGATCCGCTATGGCCTGA
TCCCGGAATTCGTCGGGCGCCTGCCGGTGGTCGCCGTCCTCGATGAGCTC
GAGGAAACGCAACTCGTGCAGATCCTTACCGAACCGAAAAATGCACTCAC
GAAACAATACGGCCGCCTGTTCGAGATGGAAGGCTGTGAACTGGAGTTTC
GCGAGGACGCGCTGCGTGCCGTGGCGCGCAAAGCGGTTGAGCGCAAAACC
GGCGCGCGTGGATTGCGCTCCATCATCGAGCAGAACCTGCTCGATACGAT
GTACGAGCTCCCTTCACTCGACAACGTGGCGAAAGTCGTTGTTGACGAAG
GAGCGATCAGCGGCGAGTCGAAACCGCTGATCATCTACGAAGGATCCGAC
ATGCCGAAGGCAGCATCGGATTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84951:97..870-

>mRNA_M-pyrifera_M_contig84951.19798.1 ID=mRNA_M-pyrifera_M_contig84951.19798.1|Name=mRNA_M-pyrifera_M_contig84951.19798.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1548bp|location=Sequence derived from alignment at M-pyrifera_M_contig84951:97..870- (Macrocystis pyrifera P11B4 male)
CAGAAATGTGATTACGACGTCGAAAAAGCGCAAACCGGCATCGTCTACAT
CGACGAAATAGACAAGATTTCGCGTAAATCCGACAACCCCTCGATCACCC
GTGACGTCTCGGGCGAAGGCGTACAGCAGGCACTGCTGAAGCTGATCGAA
GGTACGGTCGCTTCCGTACCCCCGCAGGGCGGGCGTAAGCATCCGCAGCA
GGAATTCCTCCAGGTCGACACGTCGAACATCCTGTTTGTTTGCGGCGGTG
CGTTCGCCGGGCTCGACAAGATCATCCGCGACCGCTCGGAAAAGGGCGGG
ATCGGGTTCTCGGCCGAGGTCAAAAGCAATGACGACAAGAAAACCACCGG
GGAAATGCTCCACCAGGTGGAACCTGAAGACCTGATCCGCTATGGCCTGA
TCCCGGAATTCGTCGGGCGCCTGCCGGTGGTCGCCGTCCTCGATGAGCTC
GAGGAAACGCAACTCGTGCAGATCCTTACCGAACCGAAAAATGCACTCAC
GAAACAATACGGCCGCCTGTTCGAGATGGAAGGCTGTGAACTGGAGTTTC
GCGAGGACGCGCTGCGTGCCGTGGCGCGCAAAGCGGTTGAGCGCAAAACC
GGCGCGCGTGGATTGCGCTCCATCATCGAGCAGAACCTGCTCGATACGAT
GTACGAGCTCCCTTCACTCGACAACGTGGCGAAAGTCGTTGTTGACGAAG
GAGCGATCAGCGGCGAGTCGAAACCGCTGATCATCTACGAAGGATCCGAC
ATGCCGAAGGCAGCATCGGATTGACAGAAATGTGATTACGACGTCGAAAA
AGCGCAAACCGGCATCGTCTACATCGACGAAATAGACAAGATTTCGCGTA
AATCCGACAACCCCTCGATCACCCGTGACGTCTCGGGCGAAGGCGTACAG
CAGGCACTGCTGAAGCTGATCGAAGGTACGGTCGCTTCCGTACCCCCGCA
GGGCGGGCGTAAGCATCCGCAGCAGGAATTCCTCCAGGTCGACACGTCGA
ACATCCTGTTTGTTTGCGGCGGTGCGTTCGCCGGGCTCGACAAGATCATC
CGCGACCGCTCGGAAAAGGGCGGGATCGGGTTCTCGGCCGAGGTCAAAAG
CAATGACGACAAGAAAACCACCGGGGAAATGCTCCACCAGGTGGAACCTG
AAGACCTGATCCGCTATGGCCTGATCCCGGAATTCGTCGGGCGCCTGCCG
GTGGTCGCCGTCCTCGATGAGCTCGAGGAAACGCAACTCGTGCAGATCCT
TACCGAACCGAAAAATGCACTCACGAAACAATACGGCCGCCTGTTCGAGA
TGGAAGGCTGTGAACTGGAGTTTCGCGAGGACGCGCTGCGTGCCGTGGCG
CGCAAAGCGGTTGAGCGCAAAACCGGCGCGCGTGGATTGCGCTCCATCAT
CGAGCAGAACCTGCTCGATACGATGTACGAGCTCCCTTCACTCGACAACG
TGGCGAAAGTCGTTGTTGACGAAGGAGCGATCAGCGGCGAGTCGAAACCG
CTGATCATCTACGAAGGATCCGACATGCCGAAGGCAGCATCGGATTGA
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