mRNA_M-pyrifera_M_contig84883.19779.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A897FYT8_9ROSA (ATP synthase subunit a, chloroplastic n=1 Tax=Rubus kawakamii TaxID=2814610 RepID=A0A897FYT8_9ROSA) HSP 1 Score: 298 bits (762), Expect = 4.230e-100 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 2 Query: 116 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 MNVLLCSIKTL+GLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY Sbjct: 1 MNVLLCSIKTLKGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: UPI001D003F41 (ATP synthase subunit a, chloroplastic-like n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D003F41) HSP 1 Score: 295 bits (755), Expect = 2.850e-99 Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 2 Query: 89 KVLFLSEGNMNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 +V FLSE NMN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS +IAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS AY Sbjct: 31 EVQFLSEDNMNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVVIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSAAY 187
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A3B5Z3G7_WHEAT (Uncharacterized protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B5Z3G7_WHEAT) HSP 1 Score: 293 bits (749), Expect = 7.040e-99 Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 2 Query: 89 KVLFLSEGNMNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 +V FLSE NMN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS +IAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYG WVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTSVAY Sbjct: 31 EVQFLSEDNMNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVVIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGLWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSVAY 187
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: X2EY56_LAGSI (ATP synthase subunit a, chloroplastic n=2 Tax=Lagenaria siceraria TaxID=3668 RepID=X2EY56_LAGSI) HSP 1 Score: 289 bits (740), Expect = 9.420e-97 Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 2 Query: 116 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 MN+LLCSI T +GLYDISGVEVGQH YWQIG FQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY Sbjct: 1 MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A2I8B6C7_9LAMI (ATP synthase CF0 A subunit n=2 Tax=lamiids TaxID=91888 RepID=A0A2I8B6C7_9LAMI) HSP 1 Score: 285 bits (728), Expect = 7.110e-96 Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 2 Query: 116 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 MNVL CSI TL+GLYDISGVEVGQHFYWQIG FQVH QVLITSWVVIAILLGSA IAVRNPQTIPT GQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTSVAY Sbjct: 1 MNVLSCSINTLKGLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLGSATIAVRNPQTIPTGGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSVAY 148
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: ATPI_ORYSI (ATP synthase subunit a, chloroplastic n=169 Tax=Mesangiospermae TaxID=1437183 RepID=ATPI_ORYSI) HSP 1 Score: 286 bits (732), Expect = 1.550e-95 Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 2 Query: 116 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTS AY Sbjct: 1 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVIIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAY 148
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: ATPI_ORYNI (ATP synthase subunit a, chloroplastic n=2 Tax=BOP clade TaxID=359160 RepID=ATPI_ORYNI) HSP 1 Score: 286 bits (732), Expect = 1.550e-95 Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 2 Query: 116 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTS AY Sbjct: 1 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVIIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAY 148
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A6H1XH61_9CARY (ATP synthase subunit a, chloroplastic n=75 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6H1XH61_9CARY) HSP 1 Score: 286 bits (731), Expect = 2.610e-95 Identity = 141/153 (92.16%), Postives = 143/153 (93.46%), Query Frame = 2 Query: 101 LSEGNMNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 + E NMNVL CSI TL+GLYDISGVEVGQHFYWQIG FQVH QVLITSWVVIAILL SA IA RNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEY PWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY Sbjct: 1 MPEDNMNVLSCSINTLKGLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLSSAAIAARNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYRPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 153
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A6J5TVQ6_PRUAR (DNA-directed RNA polymerase n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5TVQ6_PRUAR) HSP 1 Score: 299 bits (766), Expect = 3.800e-95 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 2 Query: 116 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY Sbjct: 1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A218LUN2_TAECM (ATP synthase subunit a, chloroplastic (Fragment) n=2 Tax=Triticeae TaxID=147389 RepID=A0A218LUN2_TAECM) HSP 1 Score: 285 bits (728), Expect = 5.320e-95 Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 2 Query: 116 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 559 MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS +IAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS AY Sbjct: 1 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVVIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSAAY 148 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84883.19779.1 >prot_M-pyrifera_M_contig84883.19779.1 ID=prot_M-pyrifera_M_contig84883.19779.1|Name=mRNA_M-pyrifera_M_contig84883.19779.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILback to top mRNA from alignment at M-pyrifera_M_contig84883:312..870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84883.19779.1 ID=mRNA_M-pyrifera_M_contig84883.19779.1|Name=mRNA_M-pyrifera_M_contig84883.19779.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=559bp|location=Sequence derived from alignment at M-pyrifera_M_contig84883:312..870+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84883:312..870+ >mRNA_M-pyrifera_M_contig84883.19779.1 ID=mRNA_M-pyrifera_M_contig84883.19779.1|Name=mRNA_M-pyrifera_M_contig84883.19779.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig84883:312..870+ (Macrocystis pyrifera P11B4 male)back to top |