mRNA_M-pyrifera_M_contig84835.19768.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84835.19768.1
Unique NamemRNA_M-pyrifera_M_contig84835.19768.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A517WC99_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517WC99_9PLAN)

HSP 1 Score: 546 bits (1407), Expect = 6.160e-188
Identity = 284/290 (97.93%), Postives = 286/290 (98.62%), Query Frame = 1
Query:    1 PLNPPEQTTQNQQTSVDPAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP 870
            PLNPPEQTTQN QTSVD AKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQ+KPDLSLVQPAEQKLSPTGNAMMLARCARELV LNQKEAA AFVDRA+SLIKDQP
Sbjct:  215 PLNPPEQTTQNPQTSVDLAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQQKPDLSLVQPAEQKLSPTGNAMMLARCARELVNLNQKEAALAFVDRAVSLIKDQP 504          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A6I6A642_9PLAN (Uncharacterized protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6A642_9PLAN)

HSP 1 Score: 517 bits (1332), Expect = 8.530e-180
Identity = 266/270 (98.52%), Postives = 269/270 (99.63%), Query Frame = 1
Query:   61 VKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP 870
            +KQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQ+KPDLSLVQPAEQKLSPTGNAMMLARCARELV LNQKEAAQAFVDRA+SLIKDQP
Sbjct:    1 MKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQQKPDLSLVQPAEQKLSPTGNAMMLARCARELVNLNQKEAAQAFVDRAVSLIKDQP 270          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A518FJU3_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FJU3_9PLAN)

HSP 1 Score: 449 bits (1155), Expect = 5.400e-150
Identity = 229/290 (78.97%), Postives = 258/290 (88.97%), Query Frame = 1
Query:    1 PLNPPEQTTQNQQTSVDPAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP 870
            PL  PEQ TQ  Q SV  AKVKQ+AL+ +V LSR+R NRSKPFSRRL AEAYAV  ++  AREQ+  ID VSPPLPFYKIFPLIEIGWIQLKEKDQAGLK TLDQTIEL+QKIP +GGRDTLDLISRLAAFWIAAGKEDLATDLIR+YQAE++LAQLSAYLQIAQEANHHDFESLIDLH++W SPQWVATTMILVTHGYP+AALNWAAMA +SADRTEAVTQW+LS++E A++ +++PDLSL+QPAEQKLSPTGNA MLARCARELV   Q + A+ FVD+AISLIK+QP
Sbjct:  214 PLTNPEQGTQTNQASVSAAKVKQDALQNMVELSRERKNRSKPFSRRLTAEAYAVAGDLTTAREQIAYIDTVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKATLDQTIELAQKIPQFGGRDTLDLISRLAAFWIAAGKEDLATDLIRQYQAENDLAQLSAYLQIAQEANHHDFESLIDLHQLWKSPQWVATTMILVTHGYPDAALNWAAMAPESADRTEAVTQWALSQIEYAIRHKQQPDLSLIQPAEQKLSPTGNAQMLARCARELVLFKQNQTAEKFVDKAISLIKEQP 503          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A518IBU3_9PLAN (Uncharacterized protein n=2 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IBU3_9PLAN)

HSP 1 Score: 382 bits (981), Expect = 5.990e-124
Identity = 187/270 (69.26%), Postives = 234/270 (86.67%), Query Frame = 1
Query:   61 VKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP 870
            V++ ALE IV LSR R NRSKPFSRRLAAEAYA+T +I ++REQ++RIDAVSPPLPFYK+FPLI+IGWIQLK+K    LKETLDQTI+LS++IP++GGRD+LDLI+RLAAFW+AAGKE+LA DLI KYQAE+NLAQLSA LQIA E   +DFES+IDLH  W SPQWVATT++L+ HGYPE ALNWAA ASDS +RTEAVTQWSL+ +EQ+V+Q++KP+++ +Q AE+KLSPTGNA+M ARCAR+L+ L Q E A++F+ +AIS + D+P
Sbjct:  235 VQKEALEAIVELSRSRENRSKPFSRRLAAEAYAMTGDIESSREQIDRIDAVSPPLPFYKLFPLIKIGWIQLKQKSGPELKETLDQTIQLSKQIPEFGGRDSLDLIARLAAFWVAAGKENLAVDLINKYQAENNLAQLSASLQIAHETTQYDFESMIDLHHRWDSPQWVATTLLLIAHGYPEEALNWAASASDSMERTEAVTQWSLAEIEQSVRQKQKPEITSIQTAEKKLSPTGNALMYARCARKLISLKQSETARSFLTKAISFLSDKP 504          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A2E2CCB3_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CCB3_9PLAN)

HSP 1 Score: 378 bits (970), Expect = 1.280e-122
Identity = 192/283 (67.84%), Postives = 236/283 (83.39%), Query Frame = 1
Query:   22 TTQNQQTSVDPAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP 870
            T++N++  V P  V++ ALE +V LSR R NRSKPFSRRLAAEAYA++ ++  +REQ+ RIDAV PPLPFYKIFPLIEIGWIQL EKD AGLK+TLD+T+ELS KIP YGGRDTLDLISRLAAFWIAAG E  A DLI K+QAE++LAQLSAYLQIA E NH++FESLIDLHR W +PQ VATT+IL++H Y EAALNWAA+AS++ DRTEAVTQW+L+ LEQA+ Q +KP++SL+QPAE KLS TGNA+M ARCAREL    Q E+A+AF+ ++ S +++ P
Sbjct:  195 TSKNEKKPVSPEVVQKAALESMVELSRARENRSKPFSRRLAAEAYAISGDLAGSREQIARIDAVDPPLPFYKIFPLIEIGWIQLNEKDTAGLKQTLDETVELSNKIPPYGGRDTLDLISRLAAFWIAAGNEAAAEDLISKHQAENSLAQLSAYLQIAHETNHYNFESLIDLHRRWNAPQSVATTLILISHDYDEAALNWAALASEAIDRTEAVTQWALAVLEQAISQNKKPEISLIQPAEMKLSATGNALMYARCARELAARKQTESAKAFLAKSKSFLENVP 477          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A517V8L8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V8L8_9PLAN)

HSP 1 Score: 374 bits (961), Expect = 6.290e-121
Identity = 189/287 (65.85%), Postives = 235/287 (81.88%), Query Frame = 1
Query:   10 PPEQTTQNQQTSVDPAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP 870
            PP+    NQ+  + P +V+++ALE +V LSR R NRSKPFSRRLAAEAYA++ ++  +REQ+ RIDAV   LPFYKIFPLIEIGWIQLKEKD AGLK+TLD+T+ELS+KIPD+GGRDTLDL+SRLAAFW+AAG ED A +L RKYQAE++LAQLSAYLQIA E N +DFES+IDLHR W +PQ VATT+IL++H Y EAALNWAA+A ++ DRTEAVTQWSL+ LEQAVKQ + P + L+QPAE KLS TGNA+M ARCAREL  L + E A+ F+ ++ S +++ P
Sbjct:  219 PPQNKNNNQKKPLSPEEVQKSALESMVELSRYRENRSKPFSRRLAAEAYAISGDLAGSREQIGRIDAVDQNLPFYKIFPLIEIGWIQLKEKDTAGLKKTLDETVELSKKIPDFGGRDTLDLVSRLAAFWVAAGNEDAAEELTRKYQAENSLAQLSAYLQIAHETNQYDFESMIDLHRRWNAPQAVATTLILISHNYDEAALNWAALAPEAMDRTEAVTQWSLAVLEQAVKQNKNPGIDLIQPAEMKLSATGNALMYARCARELATLKKSEQAKVFLTKSKSFLENVP 505          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A6CC94_9PLAN (Uncharacterized protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6CC94_9PLAN)

HSP 1 Score: 365 bits (936), Expect = 1.540e-117
Identity = 188/288 (65.28%), Postives = 233/288 (80.90%), Query Frame = 1
Query:   19 QTTQNQQTSV----DPAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP 870
            Q TQN  T V     P  V++ +LE +V LSR R NRSKPFSRRLAAEAYA++ ++  +REQ+ RIDAV P LPFYK+FPLIEIGW+QL+EKD AGLK+TLD+T+ELS+KIP+YGGRDTLDLISRLAAFW+AAG ED A +LI K+QAE++LAQLSAYLQIA E N++DFESLIDLHR W +PQ VATT+IL++H Y EAALNWAA+A ++ DRTEAVTQWSL+ LEQAV Q +KP + ++QPAE KLS TGNA+M ARCA EL  L + E A+AF+ ++ S ++  P
Sbjct:  191 QQTQNTSTDVKQPVSPELVQKTSLESMVELSRSRDNRSKPFSRRLAAEAYAISGDLTGSREQIARIDAVDPHLPFYKLFPLIEIGWLQLQEKDTAGLKKTLDETVELSKKIPEYGGRDTLDLISRLAAFWVAAGNEDAAEELISKHQAENSLAQLSAYLQIAHETNYYDFESLIDLHRRWNAPQSVATTLILISHDYDEAALNWAALAPEAIDRTEAVTQWSLAVLEQAVNQDKKPGIDMIQPAEMKLSATGNALMYARCAFELNALKKPELAKAFLTKSKSFLEKIP 478          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A517RF12_9PLAN (Uncharacterized protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RF12_9PLAN)

HSP 1 Score: 360 bits (923), Expect = 2.630e-115
Identity = 176/281 (62.63%), Postives = 230/281 (81.85%), Query Frame = 1
Query:   22 TTQNQQTSVDPAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKD 864
            T++N    V  A ++  ALE I+ LSR R NRSKPFSRRLAAEAYA++ +I A++ Q++ ID+V P LPFYK+FPLI+IGWIQL +K    L+ETL QTI+L+++IP+YGGRD+LDL++RLAAFW+AAG+ED A DLI+KYQAE++LAQLSA LQIA E N +DFES+IDLH  W SPQWVATT+IL+ HGYP+ ALNWAA ASD  +RTEAVTQWSL+ +EQ+VK+++KP+++ +QPAE+KLSP GNA+M ARCAR+L+ L Q E A+ F+ +AIS + D
Sbjct:  222 TSKNNVAPVSTAAIQNKALETIIELSRSRENRSKPFSRRLAAEAYAISGDIKASQAQIDYIDSVKPALPFYKLFPLIKIGWIQLNQKSGTELQETLAQTIQLAKQIPEYGGRDSLDLVARLAAFWVAAGQEDQAVDLIKKYQAENSLAQLSASLQIAHETNQYDFESMIDLHHRWDSPQWVATTLILIAHGYPQEALNWAASASDPMERTEAVTQWSLAEIEQSVKKKQKPEITKIQPAEKKLSPIGNALMYARCARKLISLKQTETARIFLTKAISFLSD 502          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A517WV60_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WV60_9PLAN)

HSP 1 Score: 339 bits (869), Expect = 2.520e-107
Identity = 170/270 (62.96%), Postives = 220/270 (81.48%), Query Frame = 1
Query:   61 VKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQAESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYPEAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKLSPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP 870
            V++ ALE I+ LSR R NRSKP+SRRLAAEAYA++ +I +++EQ++ ID VSP LPFYKIFPLIEIGW+QLKEKD +GLK TLDQT +LS++IP+YGGRDTLDLI+RLAAFWIAAGKEDLA  LIRKYQ + +LAQLSA+LQ+A E N ++FESLIDLH+ W SPQWVA T+IL+  GYP+ ALNWAA+A +   RTEAVT+W+LS++ +AV Q++K + SL+QPAE KLS TG+A M A CA++L+ LN    A+ F++++ S +   P
Sbjct:  234 VQKEALEMIIELSRARENRSKPYSRRLAAEAYALSGDIKSSQEQIDYIDRVSPRLPFYKIFPLIEIGWLQLKEKDSSGLKTTLDQTGQLSKQIPEYGGRDTLDLIARLAAFWIAAGKEDLAETLIRKYQKKDSLAQLSAHLQVAHETNQYNFESLIDLHQQWNSPQWVAVTLILINKGYPQEALNWAALAPEPIARTEAVTEWALSQVARAVSQKQKLETSLIQPAETKLSSTGSAFMYALCAQKLISLNLPNPAEIFLEKSKSFLTSTP 503          
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Match: A0A355G499_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355G499_9PLAN)

HSP 1 Score: 150 bits (379), Expect = 5.960e-40
Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 1
Query:   22 TTQNQQTSVDPAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAEAYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLKETLDQTIELSQKIPDYG 351
            T++N++  V P  V++ ALE +V LSR R NRSKPFSRRLAAEAYA++ ++  +REQ+ RIDAV PPLPFYKIFPLIEIGWIQL EKD AGLK+TLD+T+ELS KIP YG
Sbjct:  195 TSKNEKKPVSPEVVQKAALESMVELSRARENRSKPFSRRLAAEAYAISGDLAGSREQIARIDAVDPPLPFYKIFPLIEIGWIQLNEKDTAGLKQTLDETVELSNKIPPYG 304          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84835.19768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A517WC99_9PLAN6.160e-18897.93Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A6I6A642_9PLAN8.530e-18098.52Uncharacterized protein n=1 Tax=Gimesia benthica T... [more]
A0A518FJU3_9PLAN5.400e-15078.97Uncharacterized protein n=2 Tax=Gimesia panareensi... [more]
A0A518IBU3_9PLAN5.990e-12469.26Uncharacterized protein n=2 Tax=Gimesia fumaroli T... [more]
A0A2E2CCB3_9PLAN1.280e-12267.84Uncharacterized protein n=3 Tax=Planctomycetaceae ... [more]
A0A517V8L8_9PLAN6.290e-12165.85Uncharacterized protein n=2 Tax=Gimesia algae TaxI... [more]
A6CC94_9PLAN1.540e-11765.28Uncharacterized protein n=7 Tax=Planctomycetaceae ... [more]
A0A517RF12_9PLAN2.630e-11562.63Uncharacterized protein n=2 Tax=Gimesia alba TaxID... [more]
A0A517WV60_9PLAN2.520e-10762.96Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A0A355G499_9PLAN5.960e-4068.18Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84835contigM-pyrifera_M_contig84835:3..872 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score370.5
Seed ortholog evalue6.9e-100
Seed eggNOG ortholog344747.PM8797T_31880
Hectar predicted targeting categoryother localisation
EggNOG OGs2CHWP@1,2J2UZ@203682,33TUB@2
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size870
Cds size870
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816755.5209029-CDS-M-pyrifera_M_contig84835:2..8721622816755.5209029-CDS-M-pyrifera_M_contig84835:2..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84835 3..872 +
1692278159.2785425-CDS-M-pyrifera_M_contig84835:2..8721692278159.2785425-CDS-M-pyrifera_M_contig84835:2..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84835 3..872 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84835.19768.1prot_M-pyrifera_M_contig84835.19768.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84835 3..872 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84835.19768.1

>prot_M-pyrifera_M_contig84835.19768.1 ID=prot_M-pyrifera_M_contig84835.19768.1|Name=mRNA_M-pyrifera_M_contig84835.19768.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=290bp
PLNPPEQTTQNQQTSVDPAKVKQNALEEIVNLSRDRGNRSKPFSRRLAAE
AYAVTRNIPAAREQMERIDAVSPPLPFYKIFPLIEIGWIQLKEKDQAGLK
ETLDQTIELSQKIPDYGGRDTLDLISRLAAFWIAAGKEDLATDLIRKYQA
ESNLAQLSAYLQIAQEANHHDFESLIDLHRMWASPQWVATTMILVTHGYP
EAALNWAAMASDSADRTEAVTQWSLSRLEQAVKQQRKPDLSLVQPAEQKL
SPTGNAMMLARCARELVGLNQKEAAQAFVDRAISLIKDQP
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mRNA from alignment at M-pyrifera_M_contig84835:3..872+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84835.19768.1 ID=mRNA_M-pyrifera_M_contig84835.19768.1|Name=mRNA_M-pyrifera_M_contig84835.19768.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig84835:3..872+ (Macrocystis pyrifera P11B4 male)
CCGCTGAATCCGCCAGAACAGACAACTCAGAACCAGCAGACGTCCGTTGA TCCGGCCAAAGTGAAACAGAATGCACTGGAGGAAATTGTTAATCTTTCTC GCGACCGCGGGAATCGCAGCAAACCTTTCAGTCGGCGACTGGCAGCCGAA GCTTATGCAGTTACCAGAAACATTCCTGCCGCCCGCGAACAGATGGAGCG GATTGACGCCGTCAGTCCACCACTGCCATTTTATAAAATCTTCCCCCTGA TCGAAATTGGCTGGATTCAGCTTAAGGAGAAAGATCAGGCCGGTCTCAAA GAGACGCTGGATCAGACTATTGAACTCTCCCAGAAGATCCCCGATTACGG CGGAAGGGATACCTTAGACCTGATCTCCCGCCTGGCTGCCTTCTGGATTG CCGCCGGAAAAGAAGACCTGGCTACCGATCTCATCCGCAAATACCAGGCG GAAAGCAATCTGGCACAACTCTCGGCTTACCTGCAGATCGCCCAGGAAGC CAATCACCATGATTTTGAATCCCTGATTGACCTGCACCGCATGTGGGCTT CTCCCCAGTGGGTAGCAACCACCATGATTCTCGTCACTCACGGTTATCCG GAAGCCGCCCTGAACTGGGCAGCCATGGCCTCCGACTCTGCTGACCGGAC GGAAGCAGTAACTCAATGGTCACTCTCCCGGCTCGAGCAGGCCGTCAAAC AACAGCGGAAACCCGATTTAAGCCTGGTCCAGCCAGCGGAGCAGAAGCTC TCCCCCACAGGCAACGCCATGATGCTGGCCCGCTGTGCGCGGGAACTGGT CGGCCTGAATCAGAAAGAGGCCGCACAGGCCTTTGTCGACCGGGCCATCA GCCTGATCAAGGATCAACCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84835:3..872+

>mRNA_M-pyrifera_M_contig84835.19768.1 ID=mRNA_M-pyrifera_M_contig84835.19768.1|Name=mRNA_M-pyrifera_M_contig84835.19768.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1740bp|location=Sequence derived from alignment at M-pyrifera_M_contig84835:3..872+ (Macrocystis pyrifera P11B4 male)
CCGCTGAATCCGCCAGAACAGACAACTCAGAACCAGCAGACGTCCGTTGA
TCCGGCCAAAGTGAAACAGAATGCACTGGAGGAAATTGTTAATCTTTCTC
GCGACCGCGGGAATCGCAGCAAACCTTTCAGTCGGCGACTGGCAGCCGAA
GCTTATGCAGTTACCAGAAACATTCCTGCCGCCCGCGAACAGATGGAGCG
GATTGACGCCGTCAGTCCACCACTGCCATTTTATAAAATCTTCCCCCTGA
TCGAAATTGGCTGGATTCAGCTTAAGGAGAAAGATCAGGCCGGTCTCAAA
GAGACGCTGGATCAGACTATTGAACTCTCCCAGAAGATCCCCGATTACGG
CGGAAGGGATACCTTAGACCTGATCTCCCGCCTGGCTGCCTTCTGGATTG
CCGCCGGAAAAGAAGACCTGGCTACCGATCTCATCCGCAAATACCAGGCG
GAAAGCAATCTGGCACAACTCTCGGCTTACCTGCAGATCGCCCAGGAAGC
CAATCACCATGATTTTGAATCCCTGATTGACCTGCACCGCATGTGGGCTT
CTCCCCAGTGGGTAGCAACCACCATGATTCTCGTCACTCACGGTTATCCG
GAAGCCGCCCTGAACTGGGCAGCCATGGCCTCCGACTCTGCTGACCGGAC
GGAAGCAGTAACTCAATGGTCACTCTCCCGGCTCGAGCAGGCCGTCAAAC
AACAGCGGAAACCCGATTTAAGCCTGGTCCAGCCAGCGGAGCAGAAGCTC
TCCCCCACAGGCAACGCCATGATGCTGGCCCGCTGTGCGCGGGAACTGGT
CGGCCTGAATCAGAAAGAGGCCGCACAGGCCTTTGTCGACCGGGCCATCA
GCCTGATCAAGGATCAACCCCCGCTGAATCCGCCAGAACAGACAACTCAG
AACCAGCAGACGTCCGTTGATCCGGCCAAAGTGAAACAGAATGCACTGGA
GGAAATTGTTAATCTTTCTCGCGACCGCGGGAATCGCAGCAAACCTTTCA
GTCGGCGACTGGCAGCCGAAGCTTATGCAGTTACCAGAAACATTCCTGCC
GCCCGCGAACAGATGGAGCGGATTGACGCCGTCAGTCCACCACTGCCATT
TTATAAAATCTTCCCCCTGATCGAAATTGGCTGGATTCAGCTTAAGGAGA
AAGATCAGGCCGGTCTCAAAGAGACGCTGGATCAGACTATTGAACTCTCC
CAGAAGATCCCCGATTACGGCGGAAGGGATACCTTAGACCTGATCTCCCG
CCTGGCTGCCTTCTGGATTGCCGCCGGAAAAGAAGACCTGGCTACCGATC
TCATCCGCAAATACCAGGCGGAAAGCAATCTGGCACAACTCTCGGCTTAC
CTGCAGATCGCCCAGGAAGCCAATCACCATGATTTTGAATCCCTGATTGA
CCTGCACCGCATGTGGGCTTCTCCCCAGTGGGTAGCAACCACCATGATTC
TCGTCACTCACGGTTATCCGGAAGCCGCCCTGAACTGGGCAGCCATGGCC
TCCGACTCTGCTGACCGGACGGAAGCAGTAACTCAATGGTCACTCTCCCG
GCTCGAGCAGGCCGTCAAACAACAGCGGAAACCCGATTTAAGCCTGGTCC
AGCCAGCGGAGCAGAAGCTCTCCCCCACAGGCAACGCCATGATGCTGGCC
CGCTGTGCGCGGGAACTGGTCGGCCTGAATCAGAAAGAGGCCGCACAGGC
CTTTGTCGACCGGGCCATCAGCCTGATCAAGGATCAACCC
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