mRNA_M-pyrifera_M_contig84833.19767.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA) HSP 1 Score: 234 bits (597), Expect = 5.570e-73 Identity = 119/162 (73.46%), Postives = 142/162 (87.65%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKFTLPL 486 V AS +DLNYIGLDG+IGC+VNGAGLAMATMDII+L GG PANFLDVGGGATE+QV AF ILN D V++ILVNIFGGIMRCDVIAAGI+AAAKE+G+ KPIV+RLQGTNV +A+ +IE+SGFRMI+ +DLD AA+KAV+++DIV QA E+ V+V F LPL Sbjct: 276 VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIIQLFGGSPANFLDVGGGATESQVKKAFEILNADTQVKSILVNIFGGIMRCDVIAAGIIAAAKELGMKKPIVIRLQGTNVEKARALIENSGFRMIVANDLDDAAQKAVKIADIVSQAEEVHVNVSFELPL 437
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A067CEF9_SAPPC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC) HSP 1 Score: 233 bits (595), Expect = 1.140e-72 Identity = 117/162 (72.22%), Postives = 142/162 (87.65%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKFTLPL 486 V AS +DLNYIGLDG+IGC+VNGAGLAMATMDII L GG PANFLDVGGGATE+QV AF ILN D V++ILVNIFGGIMRCDVIAAG++AAAK++G+ KPIV+RLQGTNV +A+++IE+SGFRMI+ +DLD AA+KAV+++DIV QA E+ V+V F LPL Sbjct: 277 VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNADPQVKSILVNIFGGIMRCDVIAAGVIAAAKDLGMKKPIVIRLQGTNVEKARQLIENSGFRMIVANDLDDAAQKAVKIADIVAQAEEVHVNVSFELPL 438
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A024T9H2_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9H2_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.530e-72 Identity = 118/162 (72.84%), Postives = 141/162 (87.04%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKFTLPL 486 V AS +DLNYIGLDG+IGC+VNGAGLAMATMDII+L GG PANFLDVGGGATE QV AF ILN D V++ILVNIFGGIMRCDVIAAGI+AAAK++G+ KPIV+RLQGTNV +A+ +IE+SGFRMI+ +DLD AA+KAV+++DIV QA E+ V+V F LPL Sbjct: 275 VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIIQLFGGSPANFLDVGGGATEAQVKKAFEILNADNQVKSILVNIFGGIMRCDVIAAGIIAAAKDLGMKKPIVIRLQGTNVEKARALIENSGFRMIVANDLDDAAQKAVKIADIVTQAEEVHVNVSFELPL 436
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A6S8FXT7_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8FXT7_9STRA) HSP 1 Score: 232 bits (592), Expect = 5.010e-72 Identity = 116/162 (71.60%), Postives = 139/162 (85.80%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKFTLPL 486 V A+++ LNYIGLDG IGC+VNGAGLAMATMDIIKLNGG PANFLDVGGGAT+ QV AF ILN D+ V+AILVNIFGGIMRCDVIA+G+VAAA +IGL+KP+++RLQGTNV AK+VIE SG+RMI+ DDLD AA KAVR+++IV+ A +I V V F +PL Sbjct: 294 VEAAQYQLNYIGLDGSIGCLVNGAGLAMATMDIIKLNGGSPANFLDVGGGATKEQVQKAFEILNGDEKVKAILVNIFGGIMRCDVIASGVVAAAAKIGLAKPVIIRLQGTNVEAAKKVIEGSGYRMIMSDDLDDAASKAVRIAEIVKSAEDIQVGVSFEIPL 455
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A2D4BIQ5_PYTIN (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BIQ5_PYTIN) HSP 1 Score: 231 bits (590), Expect = 7.330e-72 Identity = 116/161 (72.05%), Postives = 140/161 (86.96%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKFTLP 483 V AS++DLNYIGLDG+IGC+VNGAGLAMATMDII L GG PANFLDVGGGATE+QV AF ILN D+ V++ILVNIFGGIMRCDVIAAGIVAAAK++GL KPI++RLQGTNV +A+E+I SGF+MI+ DDL+ AA+KAV+++DIV QA E ++V F LP Sbjct: 282 VEASQYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNRDEQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPIIIRLQGTNVEKARELIAQSGFKMIVADDLEDAAQKAVKIADIVAQAEEANINVSFELP 442
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A5A8ENP4_CAFRO (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8ENP4_CAFRO) HSP 1 Score: 231 bits (588), Expect = 2.570e-71 Identity = 120/162 (74.07%), Postives = 138/162 (85.19%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKFTLPL 486 V A++ DLNYIGLDG+IGCMVNGAGLAMATMDIIKL+GG PANFLDVGGGATE QV A RIL+ D V+ ILVNIFGGIMRCDVIA GI+AAAK++GL KP+V+RLQGTNV AK VIE S R+I+EDDLD AAKKAV +++IVRQAN+I +DV F LPL Sbjct: 304 VEAAKHDLNYIGLDGNIGCMVNGAGLAMATMDIIKLHGGNPANFLDVGGGATEQQVKEALRILDADPGVQTILVNIFGGIMRCDVIAQGIIAAAKDVGLRKPLVVRLQGTNVEAAKRVIEASDVRIIMEDDLDEAAKKAVGLAEIVRQANQIKIDVHFELPL 465
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: K3WN63_GLOUD (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WN63_GLOUD) HSP 1 Score: 229 bits (585), Expect = 3.530e-71 Identity = 115/160 (71.88%), Postives = 140/160 (87.50%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKFTL 480 V A+E+DLNYIGLDG+IGC+VNGAGLAMATMDII L GG PANFLDVGGGATE+QV AF ILN D V++ILVNIFGGIMRCDVIAAGIVAAAK++GL KPIV+RLQGTNV +A+E+I +SGF+MI+ DDLD AA+KAV+++DIV QA ++ ++V F + Sbjct: 278 VEAAEYDLNYIGLDGNIGCLVNGAGLAMATMDIISLYGGSPANFLDVGGGATESQVKKAFEILNADNQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPIVIRLQGTNVDKARELIANSGFKMIMTDDLDDAAEKAVKIADIVAQAEKVNINVAFEI 437
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A482RUK3_9ARCH (ADP-forming succinate--CoA ligase subunit beta n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUK3_9ARCH) HSP 1 Score: 225 bits (574), Expect = 1.420e-70 Identity = 115/158 (72.78%), Postives = 134/158 (84.81%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKF 474 V A++ DLNYIGL G IGCMVNGAGLAMATMDIIKL GGEPANFLDVGGGA+E QV AF +LN DK VR ILVNIFGGIMRCDVIA G++ AA IGL KPI++RL+GTNV EAK++IE SG R+I+ DDL+ AAKKAV V+DIVRQA E+A++V+F Sbjct: 184 VEAAKHDLNYIGLSGSIGCMVNGAGLAMATMDIIKLKGGEPANFLDVGGGASEQQVQKAFELLNADKQVRTILVNIFGGIMRCDVIAMGVINAAHNIGLKKPIIIRLKGTNVAEAKKLIEASGLRLIVTDDLEDAAKKAVHVADIVRQAEEVALNVQF 341
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A5D6YJ52_9STRA (Succinate-CoA ligase subunit beta (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YJ52_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.810e-70 Identity = 114/160 (71.25%), Postives = 137/160 (85.62%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKFTL 480 V AS +DLNYIGLDG+IGC+VNGAGLAMATMDII L GG PANFLDVGGGATE QV AF ILN D V++ILVNIFGGIMRCDVIAAGI+AAA+++GL KPIV+RLQGTNV +A+E+I SGF+MI+ DDLD AA+KAV+++DIV QA ++ ++V F L Sbjct: 239 VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLYGGSPANFLDVGGGATEAQVKKAFEILNADDKVKSILVNIFGGIMRCDVIAAGIIAAARDLGLKKPIVIRLQGTNVEKARELIASSGFKMIMADDLDDAAEKAVKIADIVAQAEQVKLNVAFEL 398
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Match: A0A1Z5K8M0_FISSO (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8M0_FISSO) HSP 1 Score: 226 bits (577), Expect = 6.700e-70 Identity = 119/158 (75.32%), Postives = 136/158 (86.08%), Query Frame = 1 Query: 1 VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGATETQVAAAFRILNNDKNVRAILVNIFGGIMRCDVIAAGIVAAAKEIGLSKPIVLRLQGTNVTEAKEVIEHSGFRMILEDDLDTAAKKAVRVSDIVRQANEIAVDVKF 474 VAASE+DLNYIGLDG+IGCMVNGAGLAM+TMDII+L GG PANFLDVGGGA+E QV AF ILN D V+AILVNIFGGIMRCDVIA GI+ A KEIG+SKPIV+RLQGTNV +AK +IE S +RMIL DDL+ AA+KAV V++IV QA +I VDVKF Sbjct: 281 VAASEYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGASEQQVQKAFEILNADPKVKAILVNIFGGIMRCDVIANGILNAVKEIGISKPIVIRLQGTNVDKAKTLIEGSPYRMILADDLEAAAEKAVGVAEIVAQAEKIEVDVKF 438 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84833.19767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84833.19767.1 >prot_M-pyrifera_M_contig84833.19767.1 ID=prot_M-pyrifera_M_contig84833.19767.1|Name=mRNA_M-pyrifera_M_contig84833.19767.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp VAASEFDLNYIGLDGDIGCMVNGAGLAMATMDIIKLNGGEPANFLDVGGGback to top mRNA from alignment at M-pyrifera_M_contig84833:3..491+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84833.19767.1 ID=mRNA_M-pyrifera_M_contig84833.19767.1|Name=mRNA_M-pyrifera_M_contig84833.19767.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=489bp|location=Sequence derived from alignment at M-pyrifera_M_contig84833:3..491+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84833:3..491+ >mRNA_M-pyrifera_M_contig84833.19767.1 ID=mRNA_M-pyrifera_M_contig84833.19767.1|Name=mRNA_M-pyrifera_M_contig84833.19767.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig84833:3..491+ (Macrocystis pyrifera P11B4 male)back to top |