mRNA_M-pyrifera_M_contig84822.19761.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: F4PSX7_CAVFA (Squalene synthase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PSX7_CAVFA) HSP 1 Score: 325 bits (832), Expect = 7.310e-103 Identity = 151/255 (59.22%), Postives = 192/255 (75.29%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEGRVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESVCV 765 FYLVLRGLD++EDD P+D K ++H F E +YQ + G G ER L+ NF KV+ VFLSL+E + +I DITKRM +GM EFL +++VT+ +WDLYCHYVAGLVG+GLS +F S LE +WFATAD+ SN MGL LQKTNIIRDYLED +E R+FWP+EIWSK+ ++ +F +P+ + SAL C+N+LITNAL H +C+DYM RLK P+V FCAIPQ MAIATL C+NNH VF GVVK+R+GE + Sbjct: 436 FYLVLRGLDTVEDDTTVPLDVKLPVMHKFAEGLYQPGFKASGYGTNNDERHLVENFDKVVDVFLSLNEGFCPIIQDITKRMAYGMSEFLQKEVVTMPEWDLYCHYVAGLVGIGLSKIFHASGLEGEWFATADKESNEMGLLLQKTNIIRDYLEDINENRIFWPREIWSKYTVKLDNFKNPQYASSALHCLNDLITNALSHTIVCLDYMGRLKNPKVIGFCAIPQVMAIATLNACYNNHGVFTGVVKIRKGERALI 690
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: F0Z8C6_DICPU (Squalene synthase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z8C6_DICPU) HSP 1 Score: 311 bits (798), Expect = 4.540e-102 Identity = 146/255 (57.25%), Postives = 188/255 (73.73%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEGRVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESVCV 765 FYLVLRGLD+IEDD + K ++ F E +YQ + + G G E+ L++NF KV+ VFLSL + Y +I DIT+RM +GM EFL + +VT+ +WDLYCHYVAGLVG+GLS +F S LES+WFATADE SN MGLFLQKTNIIRDYLED +E R+FWP+++WS++ + +F DPK SAL C+N+LITNAL H + +DYMSRLK +V NFCAIPQ MAI TL C+NN+ VF GVVK+R+G+ + Sbjct: 67 FYLVLRGLDTIEDDTTVEIKTKLPVMTQFSEGLYQPGFKVFGYGMNNDEKNLVQNFDKVVDVFLSLGDSYCTIIHDITRRMANGMSEFLQKQVVTLPEWDLYCHYVAGLVGIGLSRIFHASGLESEWFATADEESNQMGLFLQKTNIIRDYLEDINENRIFWPRDVWSRYTLNLENFKDPKYQISALHCLNDLITNALSHAVVALDYMSRLKNDKVINFCAIPQVMAIGTLNACYNNYNVFTGVVKIRKGQRALI 321
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: A0A152A2W2_9MYCE (Squalene synthase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2W2_9MYCE) HSP 1 Score: 310 bits (795), Expect = 1.600e-101 Identity = 141/255 (55.29%), Postives = 190/255 (74.51%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEGRVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESVCV 765 FYL LRGLD++EDD P++ K +L +F E +YQ + + G G E+ L++NF KV+ +FLSL +++ +I DITKRMG GM EFL + +VT+++WDLYCHYVAGLVG+GLS +FA S LE +WFA D SN MGLFLQKTNIIRDYLED +E R+FWP+++WS++ + +F D K SAL C+N+LITNAL+H + +DYMSRL+ P+V FCAIPQ MAI TL+ C+NN+ VF GVVK+R+G+ + Sbjct: 72 FYLALRGLDTVEDDTTVPIETKVPVLTTFCEGLYQPGFKVFGYGLNNDEKTLVQNFDKVVDIFLSLGDRFCPIIHDITKRMGIGMSEFLQKPVVTLQEWDLYCHYVAGLVGIGLSKMFASSGLEGEWFANCDTESNQMGLFLQKTNIIRDYLEDINENRIFWPRDVWSRYTLHLENFKDIKYKLSALHCLNDLITNALQHAVIALDYMSRLRNPKVIGFCAIPQVMAIGTLSACYNNYNVFTGVVKIRKGQRALI 326
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: A0A8J4URC2_9MYCE (Squalene synthase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4URC2_9MYCE) HSP 1 Score: 307 bits (787), Expect = 2.440e-100 Identity = 144/255 (56.47%), Postives = 185/255 (72.55%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEGRVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESVCV 765 FYLVLRGLD++EDD ++ K +L F E +YQ + G G E++L NF KVI VFL L E + +IADITKRM +GM EFL + ++T+ +WDLYCHYVAGLVG+GLS +F S LE +WFATAD SN MGLFLQKTNIIRDYLED +E R+FWP+++WS++ + +F + K SAL C+N+LITNAL H +C+DYMSRLK +V NFCAIPQ MAI TL C+NN+ VF GVVK+R+G+ + Sbjct: 70 FYLVLRGLDTVEDDTTVAIETKLPVLTQFSEILYQPGHKVFGYGLNNDEKLLAENFDKVIDVFLKLGEGFCPIIADITKRMAYGMAEFLQKPVITLPEWDLYCHYVAGLVGIGLSRIFHASGLEGEWFATADHESNQMGLFLQKTNIIRDYLEDINENRIFWPRDVWSRYTLHLENFKNVKYQMSALHCLNDLITNALGHAVVCLDYMSRLKNEKVINFCAIPQVMAIGTLNACYNNYNVFTGVVKIRKGQRALI 324
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: FDFT_RAT (Squalene synthase n=25 Tax=Tetrapoda TaxID=32523 RepID=FDFT_RAT) HSP 1 Score: 306 bits (785), Expect = 4.890e-100 Identity = 146/253 (57.71%), Postives = 187/253 (73.91%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEGRVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESV 759 FYL+LR +D++EDDMA V++K LL +FH +Y+ +W KE RV+L +F + F +L EKYQ VIADI RMG GM EFL++D+ + +DWD YCHYVAGLVG+GLS LF+ SE E E +N MGLFLQKTNIIRDYLED EGR FWP+E+W K+ +++ DF+ P+N A+ C+NELITNAL+HIP I Y+SRL+ VFNFCAIPQ MAIATLA C+NNHQVF+GVVK+R+G++V Sbjct: 72 FYLILRAMDTVEDDMAISVEKKIPLLRNFHTFLYEPEWRFTE--SKEKHRVVLEDFPTISLEFRNLAEKYQTVIADICHRMGCGMAEFLNKDVTSKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDTECANSMGLFLQKTNIIRDYLEDQQEGRQFWPQEVWGKYVKKLEDFVKPENVDVAVKCLNELITNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNHQVFKGVVKIRKGQAV 322
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: D3BCX8_POLPP (Squalene synthase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BCX8_POLPP) HSP 1 Score: 307 bits (786), Expect = 4.990e-100 Identity = 145/267 (54.31%), Postives = 195/267 (73.03%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEGRVFWPKEIWSKHAEEITDFIDPKNSRS------------ALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESVCV 765 FYLVLRGLD++EDD ++ K +L F E +YQ + + G G E++L+ NF KV+ V+LSL +++ +I DITKRM HGM EFL +++VT+ +WDLYCHYVAGLVG+GLS +FA S LES+WFA AD+ SN MGLFLQKTNIIRDYLED +E R+FWP+EIWSK+ ++ +F + ++++S AL C+N+LITNAL H + +DYMSRL+ P+V FCAIPQ MAI TL+ C+NNH VF GVVK+R+G+ + Sbjct: 70 FYLVLRGLDTVEDDTTVSLETKLPVLTKFAEGLYQPGFKVFGYGMNNDEKMLVENFDKVVDVYLSLGDRFCPIIHDITKRMAHGMSEFLQKEVVTLPEWDLYCHYVAGLVGIGLSKIFAASGLESEWFANADKESNDMGLFLQKTNIIRDYLEDINESRIFWPREIWSKYTAKLDNFKNIQHAQSVSLMLIVTMIVIALNCLNDLITNALSHAIVSLDYMSRLRNPKVIGFCAIPQVMAIGTLSACYNNHGVFTGVVKIRKGQRALI 336
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: A0A833ZLW8_9CHIR (Squalene synthase n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A833ZLW8_9CHIR) HSP 1 Score: 303 bits (777), Expect = 1.060e-99 Identity = 144/253 (56.92%), Postives = 186/253 (73.52%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEGRVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESV 759 FYL+LR LD++EDDM +++K LLH+FH +Y+ DW KE +R +L +F + F +L KYQ VIADI ++MGHGM EFL + + + ++WD YCHYVAGLVG+GLS LF+ SELE +SN MGLFLQKTNIIRDYLED EGR FWP+E+WSK+ ++++DF P+N A+ C+NELITNAL HIP I Y+SRL+ VFNFCAIPQ MAIATLA C+NN QVF+GVVK+R+G++V Sbjct: 72 FYLILRALDTVEDDMTISIEKKIPLLHNFHTYLYEPDWRF--MESKEKDRQVLEDFPTISLEFRNLSVKYQTVIADICQKMGHGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASELEDPVVGEDTASSNSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSKYVKKLSDFAKPENMDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAV 322
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: FDFT_DICDI (Squalene synthase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=FDFT_DICDI) HSP 1 Score: 305 bits (780), Expect = 2.790e-99 Identity = 143/255 (56.08%), Postives = 187/255 (73.33%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEGRVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESVCV 765 FYLVLRGLD+IEDD ++ K +L SF E +YQ + + G G E+ L+ NF KV+ VFL L + Y +I DIT+RM +GM EFL + +VT+ +WDLYCHYVAGLVG+GLS +F S LES+WFATAD+ SN MGLFLQKTNIIRDYLED +E R+FWP+++W+++ + +F + K AL C+N+LITNAL H + +DYMSRLK P+V NFCAIPQ MAI TL C+NN+ VF GVVK+R+G+ + Sbjct: 70 FYLVLRGLDTIEDDTTVELNTKLPVLTSFSEGLYQPGYKVFGYGMNNDEKNLVENFDKVVDVFLGLGDGYCTIIHDITRRMANGMSEFLQKSVVTLPEWDLYCHYVAGLVGIGLSKIFHASGLESEWFATADDESNQMGLFLQKTNIIRDYLEDINEKRIFWPRDVWARYTLHLENFKEAKYQIPALHCLNDLITNALSHALIALDYMSRLKNPQVINFCAIPQVMAIGTLNACYNNYNVFTGVVKIRKGQRALI 324
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: A0A250XGK7_9CHLO (Squalene synthase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XGK7_9CHLO) HSP 1 Score: 306 bits (783), Expect = 3.100e-99 Identity = 148/258 (57.36%), Postives = 196/258 (75.97%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEG---RVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESVCV 765 FYLVLRGLD++EDDMA D K +L FHE IYQ+D+S++ CG K H + L++ FGKVI+VFLSLD+ +Q VIADITK+MG GM+EF+ ++++T+ D++LYCHYVAGLVG+GLS LFA S LE + A++ +N MGLFLQKTNIIRDYLED E R+FWPK IW ++ + + DF + N A+ C+N +I +AL H+P CI YM +L++ +VF FCAIPQ MA TLA C+NN +VFEGVVK+RRG++ CV Sbjct: 68 FYLVLRGLDTVEDDMALDNDIKLPMLLVFHEKIYQKDFSME-CGYK-HYKKLMKEFGKVINVFLSLDKVFQIVIADITKKMGAGMNEFIQKEVITVADYNLYCHYVAGLVGIGLSQLFASSSLEDSAVSKAEDLANHMGLFLQKTNIIRDYLEDIIEEPAPRMFWPKAIWGQYGKSLEDFKESSNREGAVKCLNHMIVDALSHLPFCIQYMKQLRDRKVFRFCAIPQIMAAGTLAVCYNNGKVFEGVVKMRRGQTACV 323
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Match: A0A150H3G5_GONPE (Squalene synthase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3G5_GONPE) HSP 1 Score: 305 bits (781), Expect = 6.790e-99 Identity = 149/258 (57.75%), Postives = 192/258 (74.42%), Query Frame = 1 Query: 1 FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERVLLRNFGKVISVFLSLDEKYQQVIADITKRMGHGMDEFLHRDLVTIEDWDLYCHYVAGLVGLGLSGLFARSELESQWFATADEASNIMGLFLQKTNIIRDYLEDAHEG---RVFWPKEIWSKHAEEITDFIDPKNSRSALACMNELITNALEHIPLCIDYMSRLKEPRVFNFCAIPQAMAIATLARCFNNHQVFEGVVKLRRGESVCV 765 FYLVLRGLD++EDDMA VD K L FHE IY R +++ CG ++R L+ FG V+SVFL L+ +Q+VIADIT+RMGHGM +F+ +++VT+ D+DLYCHYVAGLVG+GLS LFA S LES A A++ SN MGLFLQKTNIIRDYLED E R+FWP+EIW ++ + DF +P N + A+ C+N +IT+AL H+P C+ YM +L+ VF FCAIPQ MAI TLA C+NN ++FEGVVK+RRGE+ V Sbjct: 68 FYLVLRGLDTVEDDMALQVDFKVPELKRFHERIYDRGFTM-ACGYNHYKR-LMAQFGTVVSVFLQLEPAHQRVIADITRRMGHGMADFIEKEVVTVADYDLYCHYVAGLVGIGLSQLFAASGLESPGMAVAEDLSNHMGLFLQKTNIIRDYLEDIMEEPAPRMFWPREIWGRYGATLADFKEPANRQRAVQCLNHMITDALRHVPYCMQYMEQLRHVMVFRFCAIPQIMAIGTLAICYNNGKLFEGVVKMRRGETATV 323 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84822.19761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84822.19761.1 >prot_M-pyrifera_M_contig84822.19761.1 ID=prot_M-pyrifera_M_contig84822.19761.1|Name=mRNA_M-pyrifera_M_contig84822.19761.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp FYLVLRGLDSIEDDMAFPVDRKTALLHSFHECIYQRDWSLDGCGEKEHERback to top mRNA from alignment at M-pyrifera_M_contig84822:3..870+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84822.19761.1 ID=mRNA_M-pyrifera_M_contig84822.19761.1|Name=mRNA_M-pyrifera_M_contig84822.19761.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=868bp|location=Sequence derived from alignment at M-pyrifera_M_contig84822:3..870+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84822:3..870+ >mRNA_M-pyrifera_M_contig84822.19761.1 ID=mRNA_M-pyrifera_M_contig84822.19761.1|Name=mRNA_M-pyrifera_M_contig84822.19761.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig84822:3..870+ (Macrocystis pyrifera P11B4 male)back to top |