mRNA_M-pyrifera_M_contig84788.19755.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A5A8EMJ2_CAFRO (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8EMJ2_CAFRO) HSP 1 Score: 353 bits (906), Expect = 8.740e-121 Identity = 184/237 (77.64%), Postives = 207/237 (87.34%), Query Frame = 1 Query: 31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTA-LPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 RKKEAR AH S +K+L G+RAKL +K+R KEKV MKKT A HEEK + + VA TA +P YLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKP+AD E+F I +GK++ KAWKR++TKVT+VGEGF RKPPKYERF+RPMALR KKAHVTHPELQATFCLDI+GVKKNPSS++YTQLGVITKGT+IEVNV+DLGLVTP GKVVWGKYAQVTNNPE+D CINAVLLV Sbjct: 25 RKKEAREAHRNSEMSKKLQGIRAKLFHKQRFKEKVAMKKTIAAHEEK--DSRARVAPDSTAAMPHYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPIADDEMFNIIKTGKKQNKAWKRMITKVTFVGEGFTRKPPKYERFIRPMALRHKKAHVTHPELQATFCLDIIGVKKNPSSTMYTQLGVITKGTVIEVNVSDLGLVTPAGKVVWGKYAQVTNNPEMDNCINAVLLV 259
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: F0Y825_AURAN (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y825_AURAN) HSP 1 Score: 347 bits (891), Expect = 1.730e-118 Identity = 175/236 (74.15%), Postives = 203/236 (86.02%), Query Frame = 1 Query: 31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 RKKEAR HE ++ AK++HGLRAKL NK+R KEK M+KT AMHEEK+ + +D A+P++LLDREG SRAK+LSN++KQKR EKAGKWSVPIPKVKPVAD E+FR++ SGKRKKK+WKRVVTKVT+V F RKPPKYERF+RP L KKAHVTHPEL+ATFCLDI+GVKKNPSS +YT LGVITKGT+IEVNV++LGLVT TG+VVWGKYAQVTNNPELDGCINAVLLV Sbjct: 25 RKKEARSVHENAKFAKKVHGLRAKLYNKQRFKEKATMRKTIAMHEEKEARARNDDGANDGAVPAFLLDREGASRAKILSNSIKQKRAEKAGKWSVPIPKVKPVADDEMFRVQQSGKRKKKSWKRVVTKVTFVDPNFTRKPPKYERFIRPSGLSMKKAHVTHPELKATFCLDIIGVKKNPSSQMYTTLGVITKGTVIEVNVSELGLVTTTGRVVWGKYAQVTNNPELDGCINAVLLV 260
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A7S3ZIB4_9EUKA (Ribosome biogenesis protein NSA2 homolog n=3 Tax=Chlorarachniophyceae TaxID=29197 RepID=A0A7S3ZIB4_9EUKA) HSP 1 Score: 347 bits (889), Expect = 4.450e-118 Identity = 175/236 (74.15%), Postives = 205/236 (86.86%), Query Frame = 1 Query: 31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 RK+EAR AH S+ AK+ HGL+AK+LNK+R+KEK MKKT AMHE+ + K A A+P++L+DREGVSRAKVLSNTVKQKRKEKAGKW+VP+PKV+P+A++E+FR+ +G RKKKAWKR++TKVTYVGEGF RKPPKYERF+RP LRFKKAHVTHPEL+ TF LDI+GVKKNP S LYT LGVITKGT+IEVNV+DLGLVTP+GKVVWGKYAQVTNNPE DGCINAVLLV Sbjct: 32 RKREAREAHTRSKIAKKAHGLKAKMLNKQRYKEKATMKKTIAMHEQSTNKHKEKDAEPSGAVPAFLMDREGVSRAKVLSNTVKQKRKEKAGKWAVPVPKVRPMAEAEMFRVMRTGVRKKKAWKRMITKVTYVGEGFTRKPPKYERFIRPTGLRFKKAHVTHPELKCTFHLDIIGVKKNPQSPLYTNLGVITKGTVIEVNVSDLGLVTPSGKVVWGKYAQVTNNPENDGCINAVLLV 267
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A7S3JUX5_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUX5_9STRA) HSP 1 Score: 346 bits (888), Expect = 4.960e-118 Identity = 178/236 (75.42%), Postives = 202/236 (85.59%), Query Frame = 1 Query: 31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 RKKEAR HE +R A+++HGLRAKL NKKR KEK M+KT AMHEEK G + S+ A+P+YLLDREGVSRAK+LSNTVKQKR +KAGKWSVPIPKV+PVAD E+FR++ SGKR KK+WKRVV KVT+V + F RKPPKYERF+RP LR KKAHVTHPEL+ TF LDILGVKKNPSS +YT LGVITKGTIIEVNV+DLGLVT +G+VVWGKYAQVTNNPELDGCINAVLLV Sbjct: 25 RKKEARAVHEEARFARKIHGLRAKLHNKKRFKEKATMRKTIAMHEEKDGRGRNDDGASEGAVPAYLLDREGVSRAKLLSNTVKQKRADKAGKWSVPIPKVRPVADDEMFRVQTSGKRNKKSWKRVVNKVTFVDDNFTRKPPKYERFIRPTGLRMKKAHVTHPELKTTFNLDILGVKKNPSSPMYTALGVITKGTIIEVNVSDLGLVTTSGRVVWGKYAQVTNNPELDGCINAVLLV 260
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: W7THK2_9STRA (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THK2_9STRA) HSP 1 Score: 346 bits (887), Expect = 7.030e-118 Identity = 174/236 (73.73%), Postives = 204/236 (86.44%), Query Frame = 1 Query: 31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 RKKEAR H S+ A+++HGLRAKL N KR+KEK QM+KT AMH+EK ++ + A+P+YL+DREG+SRAKVLSN+VKQKR EKAGKWSVP+PKVKPVAD E+F++ SGKRK K+WKR+VTKVT+VGE F RK PK+ERF+RP LRFKKAHVTHP+LQATFCLDILGVKKNPSS +YT LGVITKGT+IEVNV++LGLVT +GKVVWGKYAQVTNNPELDGCINAVLLV Sbjct: 25 RKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: D7FR97_ECTSI (Ribosome biogenesis protein NSA2 homolog n=3 Tax=PX clade TaxID=569578 RepID=D7FR97_ECTSI) HSP 1 Score: 344 bits (883), Expect = 2.860e-117 Identity = 178/236 (75.42%), Postives = 203/236 (86.02%), Query Frame = 1 Query: 31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 RKK+AR H+ S A+++HG+RAKL +KR KEK M+KT AMH+E+ + A D A+P+YLLDREGVSRAKVLSNTVKQKRKEKAGKW VPIPKVKPVAD E+F++ SGKRK KAWKR+VTKVT+VGEGF RK PKYERF+RP LRFKKAHVTHPEL+ATF LDILGVKKNPSS LYTQLGV+TKGT+IEVNV+DLGLVT +GKVVWGKYAQVTN+PELDGCINAVLLV Sbjct: 25 RKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 260
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A7S2DND8_9STRA (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND8_9STRA) HSP 1 Score: 344 bits (882), Expect = 5.730e-117 Identity = 179/237 (75.53%), Postives = 204/237 (86.08%), Query Frame = 1 Query: 28 SRKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 +RK++AR H+ S+ A+ +HGLRAKL N+KR KEK M+KT AMH+E+ + A ALP+YLLDREGVSRAKVLSNTVKQKRKEKAGKW+VPIPKVKPVAD E+F++ SGKRK KAWKR+VTKVT+VG F RK PKYERF+RP LRFKKAHVTHPELQATF LD+LGVKKNPSS+LYTQLGVITKGT+IEVNV+DLGLVT +GKVVWGKYAQVTNNPELDGCINAVLLV Sbjct: 34 ARKRQAREVHKKSKFAQCVHGLRAKLYNQKRFKEKAVMRKTIAMHQERDNKHGNDDALPKDALPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWNVPIPKVKPVADEEMFKVMRSGKRKAKAWKRMVTKVTFVGPNFTRKNPKYERFIRPSGLRFKKAHVTHPELQATFHLDLLGVKKNPSSNLYTQLGVITKGTVIEVNVSDLGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 270
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: C3Y211_BRAFL (Ribosome biogenesis protein NSA2 homolog n=5 Tax=Bilateria TaxID=33213 RepID=C3Y211_BRAFL) HSP 1 Score: 343 bits (881), Expect = 5.750e-117 Identity = 175/236 (74.15%), Postives = 203/236 (86.02%), Query Frame = 1 Query: 31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 RKKEARR HE++ AK+L GL+AKL NKKRH EKVQMKKT MHEE+K +++ A+P+YLLDREG SRAKVLSN +KQKRKEKAGKW VP+PKV+ +++E+FR+ +GK KKKAWKR+VTKVTYVGEGF RKPPKYERF+RPM LRFKKAHVTHPEL+ATFCL I+GVKKNP+S LYT LGVITKGT+IEVNV++LGLVT GKV+WGKYAQVTNNPE DGCINAVLLV Sbjct: 25 RKKEARRPHEMAEKAKKLKGLKAKLYNKKRHAEKVQMKKTLKMHEERKTKERKDDKVPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQSEAEVFRVVKTGKSKKKAWKRMVTKVTYVGEGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPIIGVKKNPTSPLYTSLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: W4GLP2_9STRA (Ribosome biogenesis protein NSA2 homolog n=6 Tax=Oomycota TaxID=4762 RepID=W4GLP2_9STRA) HSP 1 Score: 342 bits (877), Expect = 2.340e-116 Identity = 177/237 (74.68%), Postives = 200/237 (84.39%), Query Frame = 1 Query: 28 SRKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 +RKKEAR H S A+++HGLRAKL N+KR KEK MKKT AMH E+ + D A+PSYLLDREGVSRAKVLSNTVKQKRKEKAGKW VPIPKVKP+AD E+F++ SGKR+ KAWKR++TK T+VGE F RKPPKYERF+RP A+RFKKAHVTHPEL+ TF LDILGVKKNPSS LYTQLGV+TKGTIIEVNV++LGLVT TGKVVWGK+AQVTNNPE DGCINAVLLV Sbjct: 24 ARKKEAREVHRRSAFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPSSPLYTQLGVMTKGTIIEVNVSELGLVTTTGKVVWGKFAQVTNNPENDGCINAVLLV 260
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A7S2SRB9_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRB9_9STRA) HSP 1 Score: 342 bits (876), Expect = 3.320e-116 Identity = 177/237 (74.68%), Postives = 204/237 (86.08%), Query Frame = 1 Query: 28 SRKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738 SRK++AR AH+ S A+++HG+RAKL ++KR KEK M+KT +MH+E+ + A A+P+YLLDREGVSRAKVLSNTVKQKRKEKAGKW VPIPKVKPVAD E+F++ SGKRK KAWKR+VTKV +VGE F RK PKYERF+RP LRFKKAHVTHPELQATF LDI+GVKKNPSSSLYTQLGVITKGT+IEVNV++LGLVT +GKVVWGKYAQVTNNPELDGCINAVLLV Sbjct: 24 SRKRQAREAHKRSEFAQKVHGIRAKLYHQKRFKEKATMRKTISMHQERDNKHANDEAVPKGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWEVPIPKVKPVADDEMFKVLRSGKRKAKAWKRMVTKVCFVGENFTRKNPKYERFIRPTGLRFKKAHVTHPELQATFHLDIIGVKKNPSSSLYTQLGVITKGTVIEVNVSELGLVTQSGKVVWGKYAQVTNNPELDGCINAVLLV 260 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84788.19755.1 >prot_M-pyrifera_M_contig84788.19755.1 ID=prot_M-pyrifera_M_contig84788.19755.1|Name=mRNA_M-pyrifera_M_contig84788.19755.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp MWFWVCFCFSRKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTback to top mRNA from alignment at M-pyrifera_M_contig84788:62..802- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84788.19755.1 ID=mRNA_M-pyrifera_M_contig84788.19755.1|Name=mRNA_M-pyrifera_M_contig84788.19755.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=741bp|location=Sequence derived from alignment at M-pyrifera_M_contig84788:62..802- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84788:62..802- >mRNA_M-pyrifera_M_contig84788.19755.1 ID=mRNA_M-pyrifera_M_contig84788.19755.1|Name=mRNA_M-pyrifera_M_contig84788.19755.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig84788:62..802- (Macrocystis pyrifera P11B4 male)back to top |