mRNA_M-pyrifera_M_contig84768.19751.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84768.19751.1
Unique NamemRNA_M-pyrifera_M_contig84768.19751.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: A0A2P2L7W3_RHIMU (Protein kinase domain-containing protein n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2L7W3_RHIMU)

HSP 1 Score: 155 bits (391), Expect = 4.980e-46
Identity = 69/108 (63.89%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+V+D+  + E+PLEE QIA++C+E L+GL YLH    +HRDIKGGNIL+TE+G+VKL DFGV+AQL  T SKR+TF GTP+WMAPEVI   +YD KV
Sbjct:   39 LWIVMEYCGGGSVADLMNVTEEPLEENQIAYICREALKGLAYLHRISKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKV 146
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: A0A453LUN4_AEGTS (Protein kinase domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LUN4_AEGTS)

HSP 1 Score: 152 bits (385), Expect = 8.920e-44
Identity = 69/108 (63.89%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+V+D+  I E+PL+E QIA++C+ETL+GL YLH    +HRDIKGGNIL+T++G+VKL DFGV+AQL  T SKR+TF GTP+WMAPEVI   +YD KV
Sbjct:  161 LWIVMEYCGGGSVADLIGITEEPLDEPQIAYICRETLKGLAYLHTIFKVHRDIKGGNILLTDQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKV 268
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: L8GJ30_ACACA (Serine/threonine kinase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJ30_ACACA)

HSP 1 Score: 155 bits (392), Expect = 7.860e-43
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSK 321
            L I M+FCGGG+VSD  +IL++PL EEQIA +C+++LRGL YLH +K IHRDIK GNIL+T+ GD+KL DFGVSAQL ST SK+++F GTPYWMAPEVI  E YD K
Sbjct:   91 LWIAMEFCGGGSVSDCEDILDEPLTEEQIAIICRQSLRGLEYLHNQKKIHRDIKAGNILLTKTGDIKLADFGVSAQLTSTLSKKNSFIGTPYWMAPEVIEGEHYDFK 197
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: UPI000CE20663 (serine/threonine-protein kinase 24-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE20663)

HSP 1 Score: 155 bits (393), Expect = 9.210e-43
Identity = 71/108 (65.74%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+V+D+  + E+PLEE QIA +C+ETL+GL YLH    +HRDIKGGNIL+TE+GDVKL DFGV+AQL  T SKR+TF GTP+WMAPEVI   +YD KV
Sbjct:   23 LWIVMEYCGGGSVADLMNVTEEPLEEFQIAFICRETLKGLAYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKV 130
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: A0A371E4E2_MUCPR (Serine/threonine-protein kinase dst1 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371E4E2_MUCPR)

HSP 1 Score: 149 bits (377), Expect = 1.500e-42
Identity = 67/108 (62.04%), Postives = 87/108 (80.56%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+V+D+  + ++ L+E QIA++C+E L+GL YLH    +HRDIKGGNIL+TE+GDVKL DFGV+AQL  T SKR+TF GTP+WMAPEVI   +YD KV
Sbjct:   67 LWIVMEYCGGGSVADLMNVTDEALDESQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKV 174
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: UPI000B8CC725 (serine/threonine-protein kinase PAK 3-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CC725)

HSP 1 Score: 153 bits (386), Expect = 1.790e-42
Identity = 67/108 (62.04%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+V+D+  + E+PLEE QIA++C+E L+G+ YLH    +HRDIKGGN+L+TE+G+VKL DFGV+AQL  T SKR+TF GTP+WMAPEVI   +YD KV
Sbjct:  326 LWIVMEYCGGGSVADLMNVTEEPLEESQIAYICREALKGVAYLHSIFKVHRDIKGGNVLLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKV 433
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: UPI000B785C5A (serine/threonine-protein kinase PAK 3-like isoform X1 n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B785C5A)

HSP 1 Score: 154 bits (388), Expect = 2.400e-42
Identity = 69/108 (63.89%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+V+D+  + E+PLEE QIA++C+E L+GL YLH    +HRDIKGGNIL+TE+G+VKL DFGV+AQL  T SKR+TF GTP+WMAPEVI   +YD KV
Sbjct:  308 LWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKV 415
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: A8I6J1_CHLRE (Mitogen activated protein kinase kinase kinase kinase 1 (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8I6J1_CHLRE)

HSP 1 Score: 148 bits (373), Expect = 3.140e-42
Identity = 69/108 (63.89%), Postives = 82/108 (75.93%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+VSD+      PL EE IAH+C E+L+GL YLHG   +HRDIK GNIL+T  GDVK+ DFGVSAQL +T SKR TF GTP+WMAPEVI   +YD KV
Sbjct:   82 LWIVMEYCGGGSVSDLLSAGRAPLPEELIAHICCESLKGLAYLHGLGKVHRDIKCGNILLTSSGDVKIADFGVSAQLTNTMSKRQTFIGTPHWMAPEVIQESRYDGKV 189
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: UPI00201A2806 (serine/threonine-protein kinase 4 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI00201A2806)

HSP 1 Score: 154 bits (388), Expect = 3.890e-42
Identity = 69/108 (63.89%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+V+D+  + E+PLEE QIA++C+E L+GL YLH    +HRDIKGGNIL+TE+G+VKL DFGV+AQL  T SKR+TF GTP+WMAPEVI   +YD KV
Sbjct:   23 LWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKV 130
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BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Match: A0A2N9EUD8_FAGSY (Protein kinase domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EUD8_FAGSY)

HSP 1 Score: 156 bits (395), Expect = 4.050e-42
Identity = 70/108 (64.81%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:    1 LQIVMDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIKGGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKYDSKV 324
            L IVM++CGGG+++D+  I+E+PLEE QIA++C+E L+GL YLH    +HRDIKGGNIL+TE+GDVKL DFGV+AQL  T SKR+TF GTP+WMAPEVI   +YD KV
Sbjct:  325 LWIVMEYCGGGSIADLMNIIEEPLEEYQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKV 432
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84768.19751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P2L7W3_RHIMU4.980e-4663.89Protein kinase domain-containing protein n=2 Tax=R... [more]
A0A453LUN4_AEGTS8.920e-4463.89Protein kinase domain-containing protein n=1 Tax=A... [more]
L8GJ30_ACACA7.860e-4367.29Serine/threonine kinase n=1 Tax=Acanthamoeba caste... [more]
UPI000CE206639.210e-4365.74serine/threonine-protein kinase 24-like n=1 Tax=Qu... [more]
A0A371E4E2_MUCPR1.500e-4262.04Serine/threonine-protein kinase dst1 (Fragment) n=... [more]
UPI000B8CC7251.790e-4262.04serine/threonine-protein kinase PAK 3-like n=1 Tax... [more]
UPI000B785C5A2.400e-4263.89serine/threonine-protein kinase PAK 3-like isoform... [more]
A8I6J1_CHLRE3.140e-4263.89Mitogen activated protein kinase kinase kinase kin... [more]
UPI00201A28063.890e-4263.89serine/threonine-protein kinase 4 n=1 Tax=Ricinus ... [more]
A0A2N9EUD8_FAGSY4.050e-4264.81Protein kinase domain-containing protein n=1 Tax=F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84768contigM-pyrifera_M_contig84768:302..625 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score151.0
Seed ortholog evalue3.1e-34
Seed eggNOG ortholog3694.POPTR_0010s16490.1
KEGG koko:K04406,ko:K08838
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
GOsGO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006950,GO:0006996,GO:0007010,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007266,GO:0007346,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0009893,GO:0009966,GO:0009987,GO:0010562,GO:0010604,GO:0010646,GO:0012501,GO:0016043,GO:0016301,GO:0016310,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017048,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0023014,GO:0023051,GO:0023052,GO:0030029,GO:0030036,GO:0031098,GO:0031267,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032147,GO:0032268,GO:0032270,GO:0033554,GO:0033674,GO:0035556,GO:0036211,GO:0040011,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043412,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045859,GO:0045860,GO:0045937,GO:0048365,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051020,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051674,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:1901564,GO:1902531
EggNOG free text desc.Serine threonine-protein kinase
EggNOG OGs37M2D@33090,3GH36@35493,4JHY4@91835,KOG0576@1,KOG0576@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Exons1
Model size324
Cds size312
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816754.5516763-UTR-M-pyrifera_M_contig84768:301..3131622816754.5516763-UTR-M-pyrifera_M_contig84768:301..313Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84768 302..313 +
1692278158.6512032-UTR-M-pyrifera_M_contig84768:301..3131692278158.6512032-UTR-M-pyrifera_M_contig84768:301..313Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84768 302..313 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816754.5653303-CDS-M-pyrifera_M_contig84768:313..6251622816754.5653303-CDS-M-pyrifera_M_contig84768:313..625Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84768 314..625 +
1692278158.6636772-CDS-M-pyrifera_M_contig84768:313..6251692278158.6636772-CDS-M-pyrifera_M_contig84768:313..625Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84768 314..625 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84768.19751.1prot_M-pyrifera_M_contig84768.19751.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84768 314..625 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84768.19751.1

>prot_M-pyrifera_M_contig84768.19751.1 ID=prot_M-pyrifera_M_contig84768.19751.1|Name=mRNA_M-pyrifera_M_contig84768.19751.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
MDFCGGGAVSDMYEILEQPLEEEQIAHVCKETLRGLVYLHGKKMIHRDIK
GGNILMTEEGDVKLVDFGVSAQLDSTQSKRDTFTGTPYWMAPEVILAEKY
DSKV
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mRNA from alignment at M-pyrifera_M_contig84768:302..625+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84768.19751.1 ID=mRNA_M-pyrifera_M_contig84768.19751.1|Name=mRNA_M-pyrifera_M_contig84768.19751.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig84768:302..625+ (Macrocystis pyrifera P11B4 male)
CTTCAGATTGTAATGGACTTCTGCGGCGGCGGAGCAGTGTCGGATATGTA
CGAGATCCTCGAGCAGCCCCTGGAGGAGGAGCAGATAGCGCACGTGTGCA
AGGAGACGCTGCGCGGCCTCGTCTACCTACACGGCAAGAAGATGATCCAC
CGCGACATCAAGGGCGGCAACATTCTCATGACCGAGGAGGGCGACGTGAA
GTTGGTCGACTTTGGCGTCAGTGCCCAGCTCGACTCCACGCAGAGCAAGA
GAGACACCTTCACCGGCACTCCCTACTGGATGGCCCCCGAGGTCATCCTC
GCCGAGAAGTACGACAGCAAAGTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84768:302..625+

>mRNA_M-pyrifera_M_contig84768.19751.1 ID=mRNA_M-pyrifera_M_contig84768.19751.1|Name=mRNA_M-pyrifera_M_contig84768.19751.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig84768:302..625+ (Macrocystis pyrifera P11B4 male)
ATGGACTTCTGCGGCGGCGGAGCAGTGTCGGATATGTACGAGATCCTCGA
GCAGCCCCTGGAGGAGGAGCAGATAGCGCACGTGTGCAAGGAGACGCTGC
GCGGCCTCGTCTACCTACACGGCAAGAAGATGATCCACCGCGACATCAAG
GGCGGCAACATTCTCATGACCGAGGAGGGCGACGTGAAGTTGGTCGACTT
TGGCGTCAGTGCCCAGCTCGACTCCACGCAGAGCAAGAGAGACACCTTCA
CCGGCACTCCCTACTGGATGGCCCCCGAGGTCATCCTCGCCGAGAAGTAC
GACAGCAAAGTAATGGACTTCTGCGGCGGCGGAGCAGTGTCGGATATGTA
CGAGATCCTCGAGCAGCCCCTGGAGGAGGAGCAGATAGCGCACGTGTGCA
AGGAGACGCTGCGCGGCCTCGTCTACCTACACGGCAAGAAGATGATCCAC
CGCGACATCAAGGGCGGCAACATTCTCATGACCGAGGAGGGCGACGTGAA
GTTGGTCGACTTTGGCGTCAGTGCCCAGCTCGACTCCACGCAGAGCAAGA
GAGACACCTTCACCGGCACTCCCTACTGGATGGCCCCCGAGGTCATCCTC
GCCGAGAAGTACGACAGCAAAGTA
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