mRNA_M-pyrifera_M_contig84760.19747.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84760.19747.1
Unique NamemRNA_M-pyrifera_M_contig84760.19747.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: A0A3C1KQH4_9GAMM (Acyltransferase n=5 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KQH4_9GAMM)

HSP 1 Score: 167 bits (422), Expect = 2.870e-50
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYPAGAPRS 258
            IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDP+RGFTTRMDLFADPAGAEAFFDAVDREVLR+NSLLRWLWSVVYPAGAPRS
Sbjct:  157 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPDRGFTTRMDLFADPAGAEAFFDAVDREVLRENSLLRWLWSVVYPAGAPRS 242          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: A0A6C0U153_9GAMM (Acyltransferase n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U153_9GAMM)

HSP 1 Score: 138 bits (348), Expect = 4.510e-39
Identity = 71/83 (85.54%), Postives = 73/83 (87.95%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYPAGA 249
            IGANSVVAA+AVVTRDVPANVVVAGNPARVVKELDP RGFTTRMDLFADP G EAFF  VDREVL  NSL RWLWS +YPA A
Sbjct:  157 IGANSVVAARAVVTRDVPANVVVAGNPARVVKELDPARGFTTRMDLFADPEGLEAFFAGVDREVLAGNSLWRWLWSRIYPASA 239          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: A0A2D5FFQ7_9GAMM (Acetyltransferase n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FFQ7_9GAMM)

HSP 1 Score: 138 bits (347), Expect = 6.560e-39
Identity = 72/85 (84.71%), Postives = 76/85 (89.41%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYPAGAPR 255
            IG NSVVAA+AVVTRDVPANVVVAGNPARVV+ELDPE GFTTRMDLFADPAG EAFFDAVDREVL  NSL RWL S+V+PA A R
Sbjct:  157 IGDNSVVAARAVVTRDVPANVVVAGNPARVVRELDPEEGFTTRMDLFADPAGVEAFFDAVDREVLAGNSLWRWLLSLVWPAAALR 241          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: A0A2N5Y758_9GAMM (Acetyltransferase n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y758_9GAMM)

HSP 1 Score: 136 bits (343), Expect = 2.630e-38
Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYPAGAPR 255
            IGANSVVAA+AVV+RDVPANVVVAGNPA+VVKELDP  GF TRMDLF+DPAG E FFD VDREVL  NS LRWLWSV+YPA A R
Sbjct:  157 IGANSVVAARAVVSRDVPANVVVAGNPAKVVKELDPTLGFRTRMDLFSDPAGLEQFFDGVDREVLSTNSTLRWLWSVLYPASAAR 241          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: A0A2N5X3Q2_9GAMM (Acetyltransferase n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5X3Q2_9GAMM)

HSP 1 Score: 127 bits (319), Expect = 1.000e-34
Identity = 63/80 (78.75%), Postives = 69/80 (86.25%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYP 240
            IG NSVVAA+AVVTRDVPANVVVAGNPA+VVKELDPERGF TRMD FADP   E FFDA++ EVL  NSL RWLW+V+YP
Sbjct:  157 IGDNSVVAARAVVTRDVPANVVVAGNPAKVVKELDPERGFVTRMDYFADPEAIERFFDAINAEVLAGNSLWRWLWAVIYP 236          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: A0A162HR05_9GAMM (Acetyltransferase n=2 Tax=Halioglobus TaxID=1217416 RepID=A0A162HR05_9GAMM)

HSP 1 Score: 127 bits (318), Expect = 1.450e-34
Identity = 64/82 (78.05%), Postives = 70/82 (85.37%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYPAG 246
            IG NSVVAA+AVVTRDVPANVVVAGNPA+VVKELDPERGFTTRMD FA+PA  E FF+ V+ +VL  NS  RWLWSVVYPA 
Sbjct:  157 IGENSVVAARAVVTRDVPANVVVAGNPAKVVKELDPERGFTTRMDYFANPAELERFFEGVNAQVLAGNSFWRWLWSVVYPAS 238          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: UPI0016747DD6 (acyltransferase n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI0016747DD6)

HSP 1 Score: 126 bits (316), Expect = 2.830e-34
Identity = 63/85 (74.12%), Postives = 70/85 (82.35%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYPAGAPR 255
            IG NSVVAA+AVVTRDVP NVVVAGNPA+VVKELDPE+GFTTRMD +ADPAG E FFD VD++VL  NS  RWL  +VYP   PR
Sbjct:  157 IGENSVVAARAVVTRDVPPNVVVAGNPAKVVKELDPEKGFTTRMDYYADPAGLERFFDEVDKQVLVGNSYWRWLLGIVYPRSRPR 241          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: A0A7Y2EMH2_9GAMM (Acyltransferase n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y2EMH2_9GAMM)

HSP 1 Score: 125 bits (315), Expect = 4.000e-34
Identity = 61/85 (71.76%), Postives = 70/85 (82.35%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYPAGAPR 255
            +G NSV+AA++VVTRDVPANVVVAGNPA+VVKELD  R F TRMD +ADP G EAFFDAVDREVL+DN+ L W WSV+YP    R
Sbjct:  156 VGENSVIAARSVVTRDVPANVVVAGNPAKVVKELDATREFKTRMDYYADPEGLEAFFDAVDREVLKDNTFLPWFWSVIYPPSKRR 240          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: A0A5C8ZUU5_9GAMM (Acyltransferase n=3 Tax=Parahaliea TaxID=1857932 RepID=A0A5C8ZUU5_9GAMM)

HSP 1 Score: 125 bits (314), Expect = 5.650e-34
Identity = 63/80 (78.75%), Postives = 68/80 (85.00%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYP 240
            IG NSVVAA+AVVTRDVPANVVVAGNPARVVKELD +RGFTTR+D F DP G E FFD VDR+VL +NS  RWLW VVYP
Sbjct:  157 IGDNSVVAARAVVTRDVPANVVVAGNPARVVKELDADRGFTTRLDYFRDPEGMERFFDEVDRQVLGENSSWRWLWGVVYP 236          
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Match: B7S102_9GAMM (Bacterial transferase hexapeptide repeat protein n=4 Tax=Halieaceae TaxID=1706372 RepID=B7S102_9GAMM)

HSP 1 Score: 125 bits (313), Expect = 8.190e-34
Identity = 62/82 (75.61%), Postives = 68/82 (82.93%), Query Frame = 1
Query:    1 IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADPAGAEAFFDAVDREVLRDNSLLRWLWSVVYPAG 246
            +G NSVVAA+AVVTRDVP NVVVAGNPA+VVKELDPERGF TRMD FA+PA  E FFDA+  EVL  NS  RWLWSVVYP+ 
Sbjct:  157 VGENSVVAARAVVTRDVPPNVVVAGNPAKVVKELDPERGFVTRMDYFANPAELERFFDAISAEVLAGNSFWRWLWSVVYPSS 238          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84760.19747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1KQH4_9GAMM2.870e-5097.67Acyltransferase n=5 Tax=Halieaceae TaxID=1706372 R... [more]
A0A6C0U153_9GAMM4.510e-3985.54Acyltransferase n=1 Tax=Kineobactrum salinum TaxID... [more]
A0A2D5FFQ7_9GAMM6.560e-3984.71Acetyltransferase n=2 Tax=Haliea sp. TaxID=1932666... [more]
A0A2N5Y758_9GAMM2.630e-3881.18Acetyltransferase n=1 Tax=Kineobactrum sediminis T... [more]
A0A2N5X3Q2_9GAMM1.000e-3478.75Acetyltransferase n=1 Tax=Pseudohalioglobus lutima... [more]
A0A162HR05_9GAMM1.450e-3478.05Acetyltransferase n=2 Tax=Halioglobus TaxID=121741... [more]
UPI0016747DD62.830e-3474.12acyltransferase n=1 Tax=Halioglobus pacificus TaxI... [more]
A0A7Y2EMH2_9GAMM4.000e-3471.76Acyltransferase n=1 Tax=Halioglobus sp. TaxID=2024... [more]
A0A5C8ZUU5_9GAMM5.650e-3478.75Acyltransferase n=3 Tax=Parahaliea TaxID=1857932 R... [more]
B7S102_9GAMM8.190e-3475.61Bacterial transferase hexapeptide repeat protein n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84760contigM-pyrifera_M_contig84760:613..873 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score166.8
Seed ortholog evalue4.6e-39
Seed eggNOG ortholog1121937.AUHJ01000013_gene914
KEGG koko:K00661
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Acetyltransferase (isoleucine patch
EggNOG OGs1N6SQ@1224,1SCHA@1236,COG0110@1,COG0110@2
EC2.3.1.79
COG Functional cat.M
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size261
Cds size261
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816754.3881366-CDS-M-pyrifera_M_contig84760:612..8731622816754.3881366-CDS-M-pyrifera_M_contig84760:612..873Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84760 613..873 -
1692278158.5613759-CDS-M-pyrifera_M_contig84760:612..8731692278158.5613759-CDS-M-pyrifera_M_contig84760:612..873Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84760 613..873 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84760.19747.1prot_M-pyrifera_M_contig84760.19747.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84760 613..873 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84760.19747.1

>prot_M-pyrifera_M_contig84760.19747.1 ID=prot_M-pyrifera_M_contig84760.19747.1|Name=mRNA_M-pyrifera_M_contig84760.19747.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
IGANSVVAAQAVVTRDVPANVVVAGNPARVVKELDPERGFTTRMDLFADP
AGAEAFFDAVDREVLRDNSLLRWLWSVVYPAGAPRS*
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mRNA from alignment at M-pyrifera_M_contig84760:613..873-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84760.19747.1 ID=mRNA_M-pyrifera_M_contig84760.19747.1|Name=mRNA_M-pyrifera_M_contig84760.19747.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=261bp|location=Sequence derived from alignment at M-pyrifera_M_contig84760:613..873- (Macrocystis pyrifera P11B4 male)
ATTGGTGCCAACAGCGTGGTGGCGGCGCAGGCCGTGGTGACCCGCGATGT GCCGGCGAATGTGGTGGTAGCCGGGAACCCGGCGCGGGTGGTAAAAGAAC TGGATCCGGAGCGCGGTTTTACCACTCGTATGGACCTGTTTGCCGACCCG GCGGGCGCGGAGGCGTTCTTCGATGCGGTTGACCGTGAAGTGTTGCGCGA CAATTCACTGCTGCGCTGGCTGTGGTCGGTGGTTTACCCTGCCGGAGCGC CGCGGAGCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84760:613..873-

>mRNA_M-pyrifera_M_contig84760.19747.1 ID=mRNA_M-pyrifera_M_contig84760.19747.1|Name=mRNA_M-pyrifera_M_contig84760.19747.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig84760:613..873- (Macrocystis pyrifera P11B4 male)
ATTGGTGCCAACAGCGTGGTGGCGGCGCAGGCCGTGGTGACCCGCGATGT
GCCGGCGAATGTGGTGGTAGCCGGGAACCCGGCGCGGGTGGTAAAAGAAC
TGGATCCGGAGCGCGGTTTTACCACTCGTATGGACCTGTTTGCCGACCCG
GCGGGCGCGGAGGCGTTCTTCGATGCGGTTGACCGTGAAGTGTTGCGCGA
CAATTCACTGCTGCGCTGGCTGTGGTCGGTGGTTTACCCTGCCGGAGCGC
CGCGGAGCTAGATTGGTGCCAACAGCGTGGTGGCGGCGCAGGCCGTGGTG
ACCCGCGATGTGCCGGCGAATGTGGTGGTAGCCGGGAACCCGGCGCGGGT
GGTAAAAGAACTGGATCCGGAGCGCGGTTTTACCACTCGTATGGACCTGT
TTGCCGACCCGGCGGGCGCGGAGGCGTTCTTCGATGCGGTTGACCGTGAA
GTGTTGCGCGACAATTCACTGCTGCGCTGGCTGTGGTCGGTGGTTTACCC
TGCCGGAGCGCCGCGGAGCTAG
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