mRNA_M-pyrifera_M_contig84622.19722.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84622.19722.1
Unique NamemRNA_M-pyrifera_M_contig84622.19722.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A2E0PVS3_9GAMM (ATP-dependent RNA helicase RhlE n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E0PVS3_9GAMM)

HSP 1 Score: 473 bits (1216), Expect = 2.460e-164
Identity = 234/291 (80.41%), Postives = 266/291 (91.41%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLPLLQ L+  +PVK+NRARALVLTPTRELAAQ+++ V+TYGKY+ LRSTVVFGGV INPQMM+LR+GVDVLVATPGRLLDL  QRA++F+D+E+L+LDEADRMLDMGFIHDIRKI+ALLP++RQ LMFSATFS +IRKLAK I NDPVEIDVAPRNS V+ I Q++HPVDK+RK +LLS+LI  + W+QVLVFSRTKHGADKLV+RL RDNI+AAAIHGNKSQ QRTKAL  FK NK+QILVATDIAARGIDID LSHVVNFDLPNVPEDY+HRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPLLQLLNKKSPVKNNRARALVLTPTRELAAQVQECVSTYGKYMNLRSTVVFGGVKINPQMMKLRRGVDVLVATPGRLLDLFQQRAINFNDIEVLILDEADRMLDMGFIHDIRKIMALLPKQRQTLMFSATFSQEIRKLAKGIINDPVEIDVAPRNSAVETISQIIHPVDKSRKADLLSYLIIREKWYQVLVFSRTKHGADKLVKRLSRDNINAAAIHGNKSQVQRTKALANFKNNKIQILVATDIAARGIDIDHLSHVVNFDLPNVPEDYIHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A836X875_9GAMM (ATP-dependent RNA helicase RhlE n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836X875_9GAMM)

HSP 1 Score: 469 bits (1207), Expect = 8.080e-163
Identity = 234/291 (80.41%), Postives = 263/291 (90.38%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLPLLQ L G    +SNR RALVLTPTRELAAQ++DSV TYGK++ LRS VVFGGV INPQMM+LRKGVDVLVATPGRLLDL+ Q AV FD LE+L+LDEADRMLDMGFIHDI+KI+ALLP+KRQNLMFSATFSD+IRKLAK I N+PVEIDVAPRNSTV+ I Q VHPVDK RK+ELL HLI+T +W+QVLVF+RTKHG+DKLV+RL R+NI AAAIHGNKSQSQRT+AL  FK+NK+Q+LVATDIA+RGIDIDQLSHVVNFDLPN+ EDYVHRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPLLQLLSGKPKARSNRVRALVLTPTRELAAQVQDSVFTYGKHMSLRSAVVFGGVGINPQMMKLRKGVDVLVATPGRLLDLYQQNAVGFDQLEVLILDEADRMLDMGFIHDIKKIMALLPKKRQNLMFSATFSDEIRKLAKGIINNPVEIDVAPRNSTVEKIAQKVHPVDKARKIELLCHLIKTGDWYQVLVFARTKHGSDKLVKRLHRENIFAAAIHGNKSQSQRTRALAEFKRNKIQVLVATDIASRGIDIDQLSHVVNFDLPNISEDYVHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A661CA71_9GAMM (ATP-dependent RNA helicase RhlE n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CA71_9GAMM)

HSP 1 Score: 468 bits (1203), Expect = 2.860e-162
Identity = 233/291 (80.07%), Postives = 265/291 (91.07%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLPLLQ L    PVK+NR RALV+TPTRELAAQ++DSV TYGK+++LRS VVFGGV INPQMM+LR+GVDVLVATPGRLLDL+ Q A+ F+D+EILVLDEADRMLDMGFIHDI+KI+ALLP++RQNLMFSATFS++IR+LAK I NDPVEIDVAPRNST++ I Q VHPVDK RK ELLSHLIRT+NW QVLVFSRTKHGA++LV++L +D I AAAIHGNKSQ QRTKAL  FKQ+K+Q+LVATDIAARGIDI+QLSHVVNFDLPNVPEDYVHRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPLLQLLSHKPPVKNNRVRALVITPTRELAAQVQDSVITYGKHIELRSAVVFGGVKINPQMMKLRRGVDVLVATPGRLLDLYQQNAIRFNDIEILVLDEADRMLDMGFIHDIKKIMALLPKQRQNLMFSATFSNEIRQLAKGIINDPVEIDVAPRNSTIEAITQKVHPVDKARKTELLSHLIRTENWHQVLVFSRTKHGANRLVKKLLQDKIHAAAIHGNKSQPQRTKALADFKQDKIQVLVATDIAARGIDINQLSHVVNFDLPNVPEDYVHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A849MFQ3_9PROT (ATP-dependent RNA helicase RhlE n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MFQ3_9PROT)

HSP 1 Score: 465 bits (1197), Expect = 1.600e-161
Identity = 231/291 (79.38%), Postives = 266/291 (91.41%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLP+LQ L   A +++NR RALVLTPTRELAAQ+++SV TYGKY+ LRS VVFGGV INPQMM+LRKGVDVLVATPGRLLDL++Q AV FD+LEILVLDEADRMLDMGFIHDI+KI+ALLP+KRQNLMFSATFS++IR+LAK I N+P+E+DVAPRNSTV+ I Q V+PVDK RK+ELLSHLI+  +W+QVLVF+RTKHG+DKLVR+L  +NI+AAAIHGNKSQSQRTKAL  FKQNK+Q+LVATDIA+RGIDIDQLSHVVNFDLPNV EDYVHRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPILQLLSDKAKIRNNRVRALVLTPTRELAAQVQESVFTYGKYMNLRSAVVFGGVGINPQMMKLRKGVDVLVATPGRLLDLYNQNAVRFDNLEILVLDEADRMLDMGFIHDIKKIMALLPKKRQNLMFSATFSNEIRQLAKGIINNPIEVDVAPRNSTVEKISQTVYPVDKARKIELLSHLIKEGDWYQVLVFARTKHGSDKLVRKLSHNNINAAAIHGNKSQSQRTKALANFKQNKIQVLVATDIASRGIDIDQLSHVVNFDLPNVSEDYVHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A7W4ZB51_9GAMM (ATP-dependent RNA helicase RhlE n=1 Tax=Microbulbifer rhizosphaerae TaxID=1562603 RepID=A0A7W4ZB51_9GAMM)

HSP 1 Score: 437 bits (1125), Expect = 1.160e-150
Identity = 218/291 (74.91%), Postives = 250/291 (85.91%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLPLL RL GG P ++N  RALVLTPTRELAAQ+ D+V  YGK++ LRS VVFGGV INPQMM+LR GVD+LVATPGRLLDL++QRA++F+ LE+LVLDEADRMLDMGFIHDI+KI+A LP+ RQNLMFSATFS +IR+LAK +  DPVEIDV+PRN+  + ++Q +HPVDK RK  LLSHLIR + W Q LVFSRTKHGA+KLV++L  D I AAAIHGNKSQ+QRTKAL  FK  +VQILVATDIAARGIDIDQL  VVNFDLPNVPEDYVHRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPLLHRLKGGKPARNNEVRALVLTPTRELAAQVHDNVQGYGKFLPLRSAVVFGGVKINPQMMKLRGGVDLLVATPGRLLDLYNQRAINFEKLEVLVLDEADRMLDMGFIHDIKKILARLPKNRQNLMFSATFSPEIRQLAKGLVQDPVEIDVSPRNTATETVQQKLHPVDKTRKSALLSHLIRENGWHQALVFSRTKHGANKLVKQLEADRIRAAAIHGNKSQNQRTKALADFKAGRVQILVATDIAARGIDIDQLPQVVNFDLPNVPEDYVHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A2A5C247_9GAMM (ATP-dependent RNA helicase RhlE n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A5C247_9GAMM)

HSP 1 Score: 439 bits (1129), Expect = 3.160e-150
Identity = 218/291 (74.91%), Postives = 252/291 (86.60%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            +AQTGTGKTAGFTLPLL  L       SNR  AL++TPTRELAAQI +SV  YGK++ LRSTVVFGGV INPQMM+LR+GV++LVATPGRLLDLH Q A+SF+D+E+LVLDEADRMLDMGFIHDI++II+L+P+KRQNL+FSATFS+DIR LA+ + N+PVEIDVAP+N+T   +EQ +HPVDK RK  LLSHLIR++ W Q LVFSRTKHGA+KLV+ L RDNI AAAIHGNKSQ+QRTKAL  FK+ KVQILVATDIAARGIDIDQL  VVNFDLPNVPEDYVHRIGRT
Sbjct:   44 SAQTGTGKTAGFTLPLLHLLADKPAANSNRTLALIVTPTRELAAQIHESVLDYGKHLNLRSTVVFGGVKINPQMMKLRRGVEILVATPGRLLDLHKQNAISFNDVEVLVLDEADRMLDMGFIHDIKRIISLMPKKRQNLLFSATFSNDIRHLARGLLNNPVEIDVAPQNTTATKVEQKIHPVDKGRKAALLSHLIRSEGWHQALVFSRTKHGANKLVKLLERDNIHAAAIHGNKSQAQRTKALAEFKKGKVQILVATDIAARGIDIDQLPQVVNFDLPNVPEDYVHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A1G0KC90_9GAMM (ATP-dependent RNA helicase n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_52_10 TaxID=1798305 RepID=A0A1G0KC90_9GAMM)

HSP 1 Score: 436 bits (1121), Expect = 6.590e-150
Identity = 219/291 (75.26%), Postives = 249/291 (85.57%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLPLLQRL      KS + RALVLTPTRELAAQ++DSV TYGKY++LRS  VFGGV I PQ+  LR GVD+LVATPGRLLDL  Q AV F+D+EILVLDEADRMLDMGF+ DI++II+ LP +RQNLMFSATFSD+IR+LAK+ITN+P EIDVAPRN  VD +   VHPVDK +K  LLSHLI+T NWFQ LVFSRTKHG DKLV+RL RDNI AAA+HGNKSQ+QRT+ +  FK+NK+QILVATDIAARG+DIDQLSHVVNFDLP VPEDY+HRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPLLQRLSNKPHEKSGKLRALVLTPTRELAAQVQDSVRTYGKYLQLRSAAVFGGVNITPQIKTLRNGVDILVATPGRLLDLLQQNAVRFNDIEILVLDEADRMLDMGFLPDIKRIISRLPARRQNLMFSATFSDEIRQLAKSITNNPKEIDVAPRNVMVDTVTHTVHPVDKAQKSALLSHLIQTQNWFQALVFSRTKHGVDKLVKRLARDNIHAAALHGNKSQAQRTRIMTDFKKNKIQILVATDIAARGLDIDQLSHVVNFDLPYVPEDYIHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A1G0J937_9GAMM (ATP-dependent RNA helicase RhlE n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15 TaxID=1798298 RepID=A0A1G0J937_9GAMM)

HSP 1 Score: 433 bits (1113), Expect = 9.200e-150
Identity = 216/291 (74.23%), Postives = 248/291 (85.22%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLP+LQRLD     K    RAL+L PTRELAAQ+  S+ TYGK++ LRSTVVFGGV INPQ+ +LR GVD+LVATPGRLLDL  Q+AV  D + ILVLDEADRMLDMGFIHDI++I++LLPR+RQNLMFSATFS DIR LAK +TN+P+EIDVAPRNST+D I QMV+PV K  K  LLSHLIRT  W+Q LVFSRTKHGADKLV+RLGRD I AAAIH NKSQSQRT+ L  FK+N++QILVATDIAARG+DI QLSHV+NFD+P+VPEDY+HRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPMLQRLDALPQQKHRPVRALLLVPTRELAAQVHASILTYGKFMPLRSTVVFGGVNINPQINKLRSGVDILVATPGRLLDLAQQKAVRLDTVSILVLDEADRMLDMGFIHDIKRILSLLPRQRQNLMFSATFSSDIRALAKNMTNNPMEIDVAPRNSTLDAISQMVYPVAKEGKASLLSHLIRTRKWYQALVFSRTKHGADKLVKRLGRDQIQAAAIHSNKSQSQRTRTLEDFKKNRIQILVATDIAARGLDIHQLSHVINFDMPHVPEDYIHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A8J4ZM64_9CHEL (RNA helicase n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZM64_9CHEL)

HSP 1 Score: 435 bits (1119), Expect = 2.270e-149
Identity = 217/291 (74.57%), Postives = 254/291 (87.29%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLP+L++L  G   K+N+ RAL+LTPTRELAAQ+ DSV TYGK V LRSTVVFGGV INPQMMRLRKG D+LVATPGRLLDL+ Q+AV FD+LE+LVLDEADRMLDMGFIHDIRK+I+ +P +RQNLMFSATFS++IRKLAKTI +DPVEI V+PRN+TV  +EQ + PVDK +K ELLS LI+ + W Q+LVFSRTKHGAD+L R+L   +I +AAIHGNKSQ+QRT+AL  FK++KVQ+LVATDIAARGIDIDQL  V+NFDLPNVPEDYVHRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPILEKLSKGPQAKANQVRALILTPTRELAAQVADSVFTYGKNVSLRSTVVFGGVKINPQMMRLRKGTDILVATPGRLLDLYQQKAVRFDNLEVLVLDEADRMLDMGFIHDIRKVISYMPNERQNLMFSATFSNEIRKLAKTIVHDPVEISVSPRNTTVATVEQWICPVDKKQKSELLSSLIKDNQWPQLLVFSRTKHGADRLTRQLNSRDIPSAAIHGNKSQNQRTRALADFKKSKVQVLVATDIAARGIDIDQLPVVINFDLPNVPEDYVHRIGRT 334          
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Match: A0A1C9W421_9GAMM (ATP-dependent RNA helicase RhlE n=3 Tax=Microbulbifer TaxID=48073 RepID=A0A1C9W421_9GAMM)

HSP 1 Score: 434 bits (1116), Expect = 4.630e-149
Identity = 218/291 (74.91%), Postives = 248/291 (85.22%), Query Frame = 1
Query:    1 AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSVTTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAVSFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIRKLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNWFQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNKVQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT 873
            AAQTGTGKTAGFTLPLL RL  GAP ++N+ RALVLTPTRELAAQ+ D+V  Y KY+ LR +VVFGGV INPQM RLR G D+LVATPGRLLDL++QRA+ FD LE LVLDEADRMLDMGFIHDI++I+ +LP KRQNL+FSATFS +IR+LAK +  DPVEIDV+PRNST + + Q +HPVDK RK +LLSHLIR +NW Q LVFSRTKHGA++LV++L  DNI AAAIHGNKSQ+ RTKAL  FK  KVQILVATDIAARGIDIDQL  VVNFDLPNVPEDYVHRIGRT
Sbjct:   44 AAQTGTGKTAGFTLPLLHRLAQGAPARNNQVRALVLTPTRELAAQVFDNVQLYSKYLPLRHSVVFGGVKINPQMQRLRGGADILVATPGRLLDLYNQRAIRFDKLEALVLDEADRMLDMGFIHDIKRILKVLPAKRQNLLFSATFSPEIRQLAKGLVTDPVEIDVSPRNSTTETVRQKLHPVDKARKQKLLSHLIRENNWHQALVFSRTKHGANRLVKQLEADNIRAAAIHGNKSQNARTKALAEFKNGKVQILVATDIAARGIDIDQLPQVVNFDLPNVPEDYVHRIGRT 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84622.19722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0PVS3_9GAMM2.460e-16480.41ATP-dependent RNA helicase RhlE n=1 Tax=Legionella... [more]
A0A836X875_9GAMM8.080e-16380.41ATP-dependent RNA helicase RhlE n=1 Tax=Thiotricha... [more]
A0A661CA71_9GAMM2.860e-16280.07ATP-dependent RNA helicase RhlE n=2 Tax=Gammaprote... [more]
A0A849MFQ3_9PROT1.600e-16179.38ATP-dependent RNA helicase RhlE n=1 Tax=Proteobact... [more]
A0A7W4ZB51_9GAMM1.160e-15074.91ATP-dependent RNA helicase RhlE n=1 Tax=Microbulbi... [more]
A0A2A5C247_9GAMM3.160e-15074.91ATP-dependent RNA helicase RhlE n=1 Tax=Cellvibrio... [more]
A0A1G0KC90_9GAMM6.590e-15075.26ATP-dependent RNA helicase n=1 Tax=Gammaproteobact... [more]
A0A1G0J937_9GAMM9.200e-15074.23ATP-dependent RNA helicase RhlE n=1 Tax=Gammaprote... [more]
A0A8J4ZM64_9CHEL2.270e-14974.57RNA helicase n=1 Tax=Nymphon striatum TaxID=424472... [more]
A0A1C9W421_9GAMM4.630e-14974.91ATP-dependent RNA helicase RhlE n=3 Tax=Microbulbi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84622contigM-pyrifera_M_contig84622:3..875 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score431.8
Seed ortholog evalue2.5e-118
Seed eggNOG ortholog493475.GARC_2603
Preferred namerhlE
KEGG koko:K11927
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA
EggNOG OGs1MU49@1224,1RMWA@1236,464WF@72275,COG0513@1,COG0513@2
EC3.6.4.13
COG Functional cat.JKL
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019
Exons1
Model size873
Cds size873
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816753.2888095-CDS-M-pyrifera_M_contig84622:2..8751622816753.2888095-CDS-M-pyrifera_M_contig84622:2..875Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84622 3..875 -
1692278157.981775-CDS-M-pyrifera_M_contig84622:2..8751692278157.981775-CDS-M-pyrifera_M_contig84622:2..875Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84622 3..875 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84622.19722.1prot_M-pyrifera_M_contig84622.19722.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84622 3..875 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84622.19722.1

>prot_M-pyrifera_M_contig84622.19722.1 ID=prot_M-pyrifera_M_contig84622.19722.1|Name=mRNA_M-pyrifera_M_contig84622.19722.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=291bp
AAQTGTGKTAGFTLPLLQRLDGGAPVKSNRARALVLTPTRELAAQIEDSV
TTYGKYVKLRSTVVFGGVPINPQMMRLRKGVDVLVATPGRLLDLHSQRAV
SFDDLEILVLDEADRMLDMGFIHDIRKIIALLPRKRQNLMFSATFSDDIR
KLAKTITNDPVEIDVAPRNSTVDLIEQMVHPVDKNRKVELLSHLIRTDNW
FQVLVFSRTKHGADKLVRRLGRDNIDAAAIHGNKSQSQRTKALGAFKQNK
VQILVATDIAARGIDIDQLSHVVNFDLPNVPEDYVHRIGRT
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mRNA from alignment at M-pyrifera_M_contig84622:3..875-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84622.19722.1 ID=mRNA_M-pyrifera_M_contig84622.19722.1|Name=mRNA_M-pyrifera_M_contig84622.19722.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=873bp|location=Sequence derived from alignment at M-pyrifera_M_contig84622:3..875- (Macrocystis pyrifera P11B4 male)
GCGGCGCAAACCGGTACCGGCAAAACCGCCGGCTTTACCCTGCCGCTGCT GCAGCGCCTCGACGGCGGCGCACCGGTGAAAAGCAATCGCGCCCGCGCGC TCGTCCTCACCCCGACCCGCGAACTCGCGGCGCAGATCGAAGACAGCGTC ACAACGTACGGTAAATACGTGAAACTGCGCTCCACGGTGGTCTTCGGCGG CGTGCCGATCAATCCGCAGATGATGCGTCTGCGCAAAGGCGTGGATGTAC TTGTCGCAACGCCCGGCCGCCTGCTCGATCTGCATTCACAGCGCGCCGTC AGTTTCGACGATCTCGAAATTCTCGTACTCGATGAAGCCGATCGCATGCT CGACATGGGCTTCATCCACGACATTCGCAAGATCATCGCGCTGTTGCCGC GCAAACGGCAAAACCTCATGTTCTCGGCCACGTTCTCCGACGATATCCGC AAGCTCGCGAAAACGATCACGAACGACCCGGTCGAGATCGACGTCGCACC GCGTAATTCGACCGTCGATCTGATCGAGCAGATGGTTCATCCCGTGGACA AGAACCGCAAGGTGGAATTGCTCAGCCATCTGATCCGCACGGACAACTGG TTCCAGGTGCTCGTATTCAGCCGGACGAAACACGGCGCCGACAAACTCGT GCGCCGGCTCGGCCGCGACAATATCGACGCGGCAGCGATCCACGGCAACA AGAGCCAGTCGCAACGTACGAAGGCGCTGGGTGCGTTCAAACAAAACAAG GTGCAGATCCTCGTCGCGACGGACATCGCGGCGCGCGGTATCGACATCGA TCAGCTGTCGCATGTCGTCAACTTCGATCTGCCCAACGTACCCGAAGATT ACGTGCACCGGATCGGCCGCACG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84622:3..875-

>mRNA_M-pyrifera_M_contig84622.19722.1 ID=mRNA_M-pyrifera_M_contig84622.19722.1|Name=mRNA_M-pyrifera_M_contig84622.19722.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1746bp|location=Sequence derived from alignment at M-pyrifera_M_contig84622:3..875- (Macrocystis pyrifera P11B4 male)
GCGGCGCAAACCGGTACCGGCAAAACCGCCGGCTTTACCCTGCCGCTGCT
GCAGCGCCTCGACGGCGGCGCACCGGTGAAAAGCAATCGCGCCCGCGCGC
TCGTCCTCACCCCGACCCGCGAACTCGCGGCGCAGATCGAAGACAGCGTC
ACAACGTACGGTAAATACGTGAAACTGCGCTCCACGGTGGTCTTCGGCGG
CGTGCCGATCAATCCGCAGATGATGCGTCTGCGCAAAGGCGTGGATGTAC
TTGTCGCAACGCCCGGCCGCCTGCTCGATCTGCATTCACAGCGCGCCGTC
AGTTTCGACGATCTCGAAATTCTCGTACTCGATGAAGCCGATCGCATGCT
CGACATGGGCTTCATCCACGACATTCGCAAGATCATCGCGCTGTTGCCGC
GCAAACGGCAAAACCTCATGTTCTCGGCCACGTTCTCCGACGATATCCGC
AAGCTCGCGAAAACGATCACGAACGACCCGGTCGAGATCGACGTCGCACC
GCGTAATTCGACCGTCGATCTGATCGAGCAGATGGTTCATCCCGTGGACA
AGAACCGCAAGGTGGAATTGCTCAGCCATCTGATCCGCACGGACAACTGG
TTCCAGGTGCTCGTATTCAGCCGGACGAAACACGGCGCCGACAAACTCGT
GCGCCGGCTCGGCCGCGACAATATCGACGCGGCAGCGATCCACGGCAACA
AGAGCCAGTCGCAACGTACGAAGGCGCTGGGTGCGTTCAAACAAAACAAG
GTGCAGATCCTCGTCGCGACGGACATCGCGGCGCGCGGTATCGACATCGA
TCAGCTGTCGCATGTCGTCAACTTCGATCTGCCCAACGTACCCGAAGATT
ACGTGCACCGGATCGGCCGCACGGCGGCGCAAACCGGTACCGGCAAAACC
GCCGGCTTTACCCTGCCGCTGCTGCAGCGCCTCGACGGCGGCGCACCGGT
GAAAAGCAATCGCGCCCGCGCGCTCGTCCTCACCCCGACCCGCGAACTCG
CGGCGCAGATCGAAGACAGCGTCACAACGTACGGTAAATACGTGAAACTG
CGCTCCACGGTGGTCTTCGGCGGCGTGCCGATCAATCCGCAGATGATGCG
TCTGCGCAAAGGCGTGGATGTACTTGTCGCAACGCCCGGCCGCCTGCTCG
ATCTGCATTCACAGCGCGCCGTCAGTTTCGACGATCTCGAAATTCTCGTA
CTCGATGAAGCCGATCGCATGCTCGACATGGGCTTCATCCACGACATTCG
CAAGATCATCGCGCTGTTGCCGCGCAAACGGCAAAACCTCATGTTCTCGG
CCACGTTCTCCGACGATATCCGCAAGCTCGCGAAAACGATCACGAACGAC
CCGGTCGAGATCGACGTCGCACCGCGTAATTCGACCGTCGATCTGATCGA
GCAGATGGTTCATCCCGTGGACAAGAACCGCAAGGTGGAATTGCTCAGCC
ATCTGATCCGCACGGACAACTGGTTCCAGGTGCTCGTATTCAGCCGGACG
AAACACGGCGCCGACAAACTCGTGCGCCGGCTCGGCCGCGACAATATCGA
CGCGGCAGCGATCCACGGCAACAAGAGCCAGTCGCAACGTACGAAGGCGC
TGGGTGCGTTCAAACAAAACAAGGTGCAGATCCTCGTCGCGACGGACATC
GCGGCGCGCGGTATCGACATCGATCAGCTGTCGCATGTCGTCAACTTCGA
TCTGCCCAACGTACCCGAAGATTACGTGCACCGGATCGGCCGCACG
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