mRNA_M-pyrifera_M_contig84570.19718.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84570.19718.1
Unique NamemRNA_M-pyrifera_M_contig84570.19718.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A812XLZ3_9DINO (Cilia- and flagella-associated protein 52 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XLZ3_9DINO)

HSP 1 Score: 265 bits (678), Expect = 1.150e-80
Identity = 174/266 (65.41%), Postives = 209/266 (78.57%), Query Frame = 1
Query:    1 LAPDRSCFFAGTSAGNRYLVDTRRFD-PTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKALTGLDLAEDGTVVVTG 795
            L+PDRS F AGT+ GNRYLVD   F+ P LR TAH DPI  V FP  + ALFLT SK ++RLW+A  R ELLRIQVPNL CLC+A+   G +I++GWDDGK+R+F PESGKLQ+VIPDAHA+AVTAL +   XXXXXXXXXXXXX VW +      M++SFKEHK XXXXXXXXXXXXXXXXXXXXXXXXXXX  +G RANALFAST+F++V Y PDE+QL+TVG+DRK+ YWD +DC+ IR+++ ST  +T  D+  DG VV TG
Sbjct:  314 LSPDRSQFLAGTNDGNRYLVDVEAFETPELRGTAHADPITDVVFPAESSALFLTASKRDIRLWNAETRMELLRIQVPNLTCLCLALARDGKSIVSGWDDGKIRAFAPESGKLQYVIPDAHADAVTALTLTSXXXXXXXXXXXXXXRVWNVSGRTQVMEVSFKEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGVRANALFASTMFRSVLYHPDESQLLTVGSDRKLSYWDASDCSAIRVIDGSTAEITTADIEPDGVVVATG 579          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A812YS87_9DINO (Cilia- and flagella-associated protein 52 n=5 Tax=Sar TaxID=2698737 RepID=A0A812YS87_9DINO)

HSP 1 Score: 237 bits (604), Expect = 1.550e-69
Identity = 155/256 (60.55%), Postives = 188/256 (73.44%), Query Frame = 1
Query:   10 DRSCFFAGTSAGNRYLVDTRRFDPTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKALTGLDLAEDG 777
            D    FAGT  GNRY VD   F+P LRATAHPDP+  VA+P  + ALF+T S G VRLW+AVER ELLRIQVP + C CV + P G  I++GW DG+VR+F PESG+L +VI DAH + VTAL+  H XXXXXXXXXXXXXXVW++      M +S+KEHK+       XXXXXXXXXXXXXXXXXXXXX +  R +A+FASTVF+ V Y PDE+QL+T G+DRK+GYWDT D T IR L+AS+  L  +D+A DG
Sbjct:  343 DGHSLFAGTRDGNRYFVDVDAFEPKLRATAHPDPVTCVAYPLRSSALFVTGSTGEVRLWNAVERKELLRIQVPGVVCQCVQIKPDGSLIVSGWQDGRVRAFLPESGRLAYVINDAHVDGVTALSFTHXXXXXXXXXXXXXXXVWDVSGSVQVMLVSWKEHKRAVTDVVVXXXXXXXXXXXXXXXXXXXXXXRSVRQSAIFASTVFRGVRYHPDESQLLTCGSDRKLGYWDTTDGTAIRQLDASSAELLCVDVARDG 598          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A8J5XCJ5_DIALT (Cilia- and flagella-associated protein 52 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCJ5_DIALT)

HSP 1 Score: 230 bits (586), Expect = 3.010e-67
Identity = 129/306 (42.16%), Postives = 163/306 (53.27%), Query Frame = 1
Query:   31 GTSAGNRYLVDTRRFDP---------TLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAH--------------AEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEAS-TKALTGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI 876
            GT+  N Y V   R            TL++T H D IN VAFP G   LF TCS  ++R+W     +ELLRIQVPNL+C  +A  P+G AI++GW DGKVR+FGP+SGKL +VI DAH              A  VTAL V ++              VW+LDTGA  M  S KEHK                                TR  A+F +T F AV Y PDE+Q I+ GTD KI +WD+ D   +R+LE S T AL GLD++ DG+  V+  ADR+VK+W YDEGV    G+GHS  +
Sbjct:  304 GTTVSNVYAVQYARHPSGKGAVLDTVTLKSTCHNDKINDVAFPRGYSELFATCSAADIRIWHLASASELLRIQVPNLECNVIAFNPKGSAIISGWSDGKVRAFGPQSGKLLYVINDAHKLVGVGNPSGGTVPANGVTALCVTNAGSRLITGGADGQVRVWKLDTGAQVMIASMKEHKGPVNDLRMGSTDVECLSASADGSVIKWSLESFTRIAAVFGATFFTAVCYHPDESQFISCGTDHKITFWDSTDMAAVRILEGSQTAALNGLDISADGSFYVSASADRSVKLWHYDEGVCWYTGEGHSSAV 609          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A1R2CV17_9CILI (Cilia- and flagella-associated protein 52 n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CV17_9CILI)

HSP 1 Score: 227 bits (579), Expect = 1.470e-66
Identity = 122/293 (41.64%), Postives = 157/293 (53.58%), Query Frame = 1
Query:    1 LAPDRSCFFAGTSAGNRYLVDTRRFDPTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKA-LTGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI 876
            L  D + FF GTS  N YL+DT +  P LR T H + IN +AFP      F TCS  ++R+W+A  R ELLRIQVPNL+C CV  +  G +IL+GW+DGK+R F P+SGKL +VI DAH   VT L                   +W +      M+ S KEH+                             +  TR   LF ST+F+ V Y PDE+QLIT G+DRKI YWDT D   IRML+ S +  +  L + ++G    TGG D+ VKVW YDEG+ +  G GHS  I
Sbjct:  284 LTNDHTHFFLGTSQSNIYLLDTDQLKPELRNTCHYEKINDIAFPFNYSDAFATCSLNDIRVWNAKNRQELLRIQVPNLECHCVCFSVDGKSILSGWNDGKLRVFLPQSGKLMYVINDAHRHGVTGLIGTIDSQRIVSGGMEGEVRIWRIGKQTQTMEASMKEHRGRVWSIQLNKTNDLAVSASSDGSCIVWDLKTHTRLTCLFESTMFKQVLYHPDESQLITTGSDRKITYWDTFDGQAIRMLDGSEEGEVNALAINKEGNHFATGGEDQVVKVWSYDEGIVLFEGIGHSSNI 576          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A7S1A252_NOCSC (Cilia- and flagella-associated protein 52 n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A252_NOCSC)

HSP 1 Score: 227 bits (579), Expect = 1.860e-66
Identity = 133/293 (45.39%), Postives = 177/293 (60.41%), Query Frame = 1
Query:    1 LAPDRSCFFAGTSAGNRYLVDTRRFDPTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKA-LTGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI 876
            L  D S FF GT+  N Y V+T      LR T H + I  +AFP G   +F+T S  ++R+W+A  R ELLRIQVPN++C CV     G ++++GW DGKVR+F P+SGKL +VI DAH   VTA+AV                 +W++      M  S KEH+             XXXXXXXXXXXXXX     TRA  LF ST+F+++ Y PDE+QL+T G+DRKI YWDT D   IR+LE S ++ +T L +++ G+  V+GG +R +K+W Y+EGV    G GHSGTI
Sbjct:  284 LTKDGSHFFCGTAQANIYWVETETLTAELRNTCHHERITQIAFPEGYSGVFVTSSVSDIRVWNAATRQELLRIQVPNMECYCVCFMRDGKSLVSGWSDGKVRAFTPQSGKLMYVINDAHKNGVTAMAVTRDSGRIVTGGMEGEVRIWKIGRQTQTMDASLKEHRGRVWCIRLRQDDSXXXXXXXXXXXXXXDISSKTRALCLFESTMFKSIVYHPDESQLLTTGSDRKIAYWDTFDGQAIRVLEGSEESEVTTLSISKSGSHFVSGGEERLLKLWDYEEGVCKYLGVGHSGTI 576          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A0H5R3D5_9EUKA (Cilia- and flagella-associated protein 52 (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R3D5_9EUKA)

HSP 1 Score: 221 bits (563), Expect = 2.210e-66
Identity = 131/286 (45.80%), Postives = 169/286 (59.09%), Query Frame = 1
Query:   22 FFAGTSAGNRYLVDTRRFDPTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKA-LTGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI 876
            FF GTS  N +LV  + FD  LR+T H   IN V FP G   LF+T S  ++R+W+   RTELLRI +  L+ LCVA+T  G  I++GW+DGK+R+F P+SGKL +VI DAH + VTA+     XXXXXXXXXXXXXXVW +      M  S KEHK                                 R NA+FAST F  + Y PD++QL+T GTDRKI YWD  D   IR+++ S    +T LD++ DG + V+G AD+ VK+W YDEG    +G GHSG +
Sbjct:   37 FFVGTSKCNIHLVHLKSFDQELRSTCHYGRINDVCFPDGYSELFITASVNDIRVWNTRLRTELLRIHINGLEALCVALTRDGKTIISGWNDGKIRAFRPQSGKLVYVIHDAHDDGVTAITTXXXXXXXXXXXXXXXXXVWAIGENTRTMVSSLKEHKAKVTLIRVKGDDSECVSASYDGSCIIWDLVGYLRLNAMFASTQFNTIVYHPDDSQLLTCGTDRKISYWDAVDGNAIRIVDGSNVGEITSLDISADGDMFVSGSADKLVKLWGYDEGHCYLYGAGHSGAV 322          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A7S2VIZ3_9DINO (Cilia- and flagella-associated protein 52 (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VIZ3_9DINO)

HSP 1 Score: 227 bits (578), Expect = 3.350e-66
Identity = 121/293 (41.30%), Postives = 163/293 (55.63%), Query Frame = 1
Query:    1 LAPDRSCFFAGTSAGNRYLVDTRRFDPTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKA-LTGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI 876
            L  + + FFAGTS  N Y  D    +  LR T H D IN V FP    ++F TCS  ++R+W+A +R ELLRIQVPN +C C+A    G ++++GW D K+R+F P+SG+L +VI DAH + VT+LA                  VW L  G+  M  S KEHK                                TR+  LF ST+F+++A+ PDE+QLIT G+DRKI YWDT D +PIR+LE S    L  L +++ G+  V+GG +R +K+W YD GV  A G GHSG I
Sbjct:  295 LTQEGTHFFAGTSKSNIYWTDVSDLNFELRNTCHHDKINHVCFPASFSSVFATCSVHDIRVWNANDRKELLRIQVPNTECSCIAFMADGRSLVSGWSDDKIRAFLPQSGRLLYVINDAHGKGVTSLATTSDCGRIISGGEEGEVRVWRLGRGSQVMDASMKEHKSRVYDIKVTKDDALAVSASGDGSCIVWDLATRTRSKCLFDSTLFKSIAFHPDESQLITTGSDRKITYWDTFDGSPIRVLEGSEDGGLNTLSMSKSGSHFVSGGEERLLKLWDYDSGVCQAIGVGHSGPI 587          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A482SVC4_9ARCH (Cilia- and flagella-associated protein 52 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVC4_9ARCH)

HSP 1 Score: 226 bits (575), Expect = 7.760e-66
Identity = 115/294 (39.12%), Postives = 157/294 (53.40%), Query Frame = 1
Query:    7 PDRSCFFAGTSAGNRYLVDTRRFDPTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVA----HSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKALTGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI 876
            P    F  GT   NRY V     +  L+ + H   +N VAFP G   L +T S+G++R+W+   R ELLRIQVPNL+CLC  V+P G  IL+GWDDGK+R+F PESG++++VIPDAH E VTALA+A     S              +W + +    M +S KEH+                              +  R NALF   VF  V Y PDE+Q++T G++ KI YWD  D   IR +     ++T LD+   G   V+G  DR +K+W YD+G+ +A G GHSG +
Sbjct:  286 PKGQKFMVGTDQCNRYEVSKDLIEAELKTSCHVGSVNDVAFPEGCPDLIVTSSRGDIRIWNTRARQELLRIQVPNLECLCTLVSPSGSTILSGWDDGKIRAFFPESGRMRFVIPDAHTERVTALAIADNDARSPWRIVSGGAEGRVRIWNVTSSHQAMIVSLKEHRGPINCIKVNADSTQCISASSDGSCIIWDLVRYVRLNALFEPNVFTNVLYHPDESQMLTCGSNHKISYWDATDAQVIRNITGGEDSMTTLDVLPSGEFFVSGSKDRQIKIWHYDDGLTVAEGMGHSGEV 579          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: A0A7S0MDN7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MDN7_9CRYP)

HSP 1 Score: 225 bits (574), Expect = 9.500e-66
Identity = 127/295 (43.05%), Postives = 163/295 (55.25%), Query Frame = 1
Query:    1 LAPDRS--CFFAGTSAGNRYLVDTRRFDPTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHKMQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKA-LTGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI 876
            LAP  S   FFA T+A   YLV        LR+T H   I+ V FP G   LF TCS+ ++R+W++    ELLR+Q+PNL C CVA +  G AIL+GW DGK+R+FGP+SGKL +VI DAH   VTA+A                  VW +   +  M  S KEHK                             R+  R N+LFAST F+AV Y PDE+QL+T GTDRKI  WD  D T IR+++ S  A ++ LD++  G   V+GGAD+ VK+W YDEG   A G GHSG +
Sbjct:  286 LAPHVSGQLFFAATAACATYLVRWDSLAAELRSTCHSARIHDVVFPAGYSELFATCSREDIRVWNSRTCAELLRVQIPNLDCFCVAFSRDGRAILSGWSDGKIRAFGPQSGKLLYVINDAHVGGVTAIACGTEADKMVSGGFDGSVRVWRVTAESRVMLGSMKEHKATVNCIRVRGNDSEFVSASSDGSCIIWDMRRFVRNNSLFASTFFKAVLYHPDESQLLTTGTDRKITNWDAYDGTAIRIVDGSASAEVSTLDISASGNFFVSGGADKLVKLWHYDEGQCRAVGLGHSGGV 580          
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Match: C5KBT5_PERM5 (Cilia- and flagella-associated protein 52 n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KBT5_PERM5)

HSP 1 Score: 225 bits (573), Expect = 2.770e-65
Identity = 130/298 (43.62%), Postives = 159/298 (53.36%), Query Frame = 1
Query:    1 LAPDRSCFFAGTSAGNRYLVDTRRFD---PTLRATAHPDPINAVAFPGGTDALFLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGKVRSFGPESGKLQWVIPDAHAEAVTALAVAHSXXXXXXXXXXXXXXVWELDTGAHK--MQLSFKEHKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGTRANALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEAS-TKALTGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI 876
            L  D + FFA TS  N Y VD    D   P LR T H +PIN V FP     +F TCSK  VR+W++  R ELLRIQVPN++C CV     G +I TGW DGK+R+F P+SGKL +VI DAH   VTA+  +                 W L        M+ S KEH+                                TR+  LF ST+F+++ Y PDE QL+T GTDRKI YWDT D   IR+LE S T  L  L +++ G+  V+GGADR VKVW YDEGV    G GHSGTI
Sbjct:  314 LTEDATHFFASTSYSNVYWVDASPQDAMTPELRNTCHHEPINQVVFPHDFSEVFATCSKEEVRVWNSRTRQELLRIQVPNVECYCVDFAHDGRSIATGWHDGKIRAFLPQSGKLLYVINDAHKNGVTAITCSSDTGRLVSGGMEGEVRCWRLGKNGQSQVMESSLKEHRGRVWCIRLTSDNTKAVSASSDGSCIVWDLVSRTRSLCLFDSTMFKSLVYHPDETQLVTTGTDRKITYWDTFDGQSIRILEGSETAELCTLSMSKSGSHFVSGGADRIVKVWDYDEGVCNLSGAGHSGTI 611          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84570.19718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812XLZ3_9DINO1.150e-8065.41Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
A0A812YS87_9DINO1.550e-6960.55Cilia- and flagella-associated protein 52 n=5 Tax=... [more]
A0A8J5XCJ5_DIALT3.010e-6742.16Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
A0A1R2CV17_9CILI1.470e-6641.64Cilia- and flagella-associated protein 52 n=2 Tax=... [more]
A0A7S1A252_NOCSC1.860e-6645.39Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
A0A0H5R3D5_9EUKA2.210e-6645.80Cilia- and flagella-associated protein 52 (Fragmen... [more]
A0A7S2VIZ3_9DINO3.350e-6641.30Cilia- and flagella-associated protein 52 (Fragmen... [more]
A0A482SVC4_9ARCH7.760e-6639.12Cilia- and flagella-associated protein 52 n=1 Tax=... [more]
A0A7S0MDN7_9CRYP9.500e-6643.05Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
C5KBT5_PERM52.770e-6543.62Cilia- and flagella-associated protein 52 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84570contigM-pyrifera_M_contig84570:2..877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.5
Seed ortholog evalue1.6e-56
Seed eggNOG ortholog5911.EAR90675
Preferred nameWDR16
Hectar predicted targeting categoryother localisation
EggNOG free text desc.WD repeat-containing protein
EggNOG OGs3ZAX7@5878,KOG0266@1,KOG0266@2759
COG Functional cat.S
Best tax levelCiliophora
Best eggNOG OGNA|NA|NA
Exons1
Model size876
Cds size876
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816753.101776-CDS-M-pyrifera_M_contig84570:1..8771622816753.101776-CDS-M-pyrifera_M_contig84570:1..877Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84570 2..877 +
1692278157.8848858-CDS-M-pyrifera_M_contig84570:1..8771692278157.8848858-CDS-M-pyrifera_M_contig84570:1..877Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84570 2..877 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84570.19718.1prot_M-pyrifera_M_contig84570.19718.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84570 2..877 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84570.19718.1

>prot_M-pyrifera_M_contig84570.19718.1 ID=prot_M-pyrifera_M_contig84570.19718.1|Name=mRNA_M-pyrifera_M_contig84570.19718.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
LAPDRSCFFAGTSAGNRYLVDTRRFDPTLRATAHPDPINAVAFPGGTDAL
FLTCSKGNVRLWDAVERTELLRIQVPNLQCLCVAVTPRGDAILTGWDDGK
VRSFGPESGKLQWVIPDAHAEAVTALAVAHSGRALVTGGRDGRVRVWELD
TGAHKMQLSFKEHKKEVTSIVVAKDDTECVSSSADGSCVVWNLRKGTRAN
ALFASTVFQAVAYFPDEAQLITVGTDRKIGYWDTADCTPIRMLEASTKAL
TGLDLAEDGTVVVTGGADRAVKVWLYDEGVPIAHGKGHSGTI
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mRNA from alignment at M-pyrifera_M_contig84570:2..877+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84570.19718.1 ID=mRNA_M-pyrifera_M_contig84570.19718.1|Name=mRNA_M-pyrifera_M_contig84570.19718.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig84570:2..877+ (Macrocystis pyrifera P11B4 male)
CTTGCCCCTGATCGGTCCTGTTTTTTCGCCGGAACGAGTGCTGGCAACCG GTACTTGGTGGACACTCGTCGATTCGACCCAACGCTTCGAGCCACCGCCC ACCCTGACCCGATCAACGCCGTTGCATTTCCTGGGGGCACAGATGCGCTT TTCTTGACGTGCTCCAAAGGAAACGTGCGTCTGTGGGACGCTGTGGAGCG CACAGAGTTGCTCCGCATCCAAGTGCCAAACTTGCAATGTCTCTGTGTCG CAGTCACACCTCGCGGCGATGCCATTCTCACCGGGTGGGATGATGGCAAG GTGCGCAGCTTTGGTCCGGAATCTGGAAAACTGCAGTGGGTGATTCCAGA CGCACACGCCGAGGCTGTGACGGCACTGGCAGTGGCACACAGTGGGAGAG CGTTGGTGACAGGTGGTCGGGATGGCAGAGTGCGAGTGTGGGAGTTGGAT ACAGGCGCGCACAAGATGCAGCTGAGTTTCAAGGAGCACAAGAAGGAAGT GACTTCGATCGTCGTGGCGAAAGACGACACCGAGTGTGTTTCTTCCTCGG CAGATGGGAGCTGTGTGGTGTGGAATTTGCGAAAGGGGACACGAGCAAAC GCGCTCTTTGCCTCTACAGTCTTCCAGGCAGTTGCTTACTTCCCAGACGA AGCGCAGCTCATTACAGTGGGCACTGATCGCAAAATCGGATACTGGGACA CTGCCGATTGCACTCCGATTCGAATGCTGGAAGCCTCCACAAAAGCCCTC ACTGGCCTCGATCTTGCAGAAGACGGCACTGTAGTGGTCACAGGCGGCGC AGATCGAGCAGTAAAAGTGTGGCTCTACGATGAAGGCGTGCCCATTGCCC ATGGCAAAGGACACAGTGGCACCATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84570:2..877+

>mRNA_M-pyrifera_M_contig84570.19718.1 ID=mRNA_M-pyrifera_M_contig84570.19718.1|Name=mRNA_M-pyrifera_M_contig84570.19718.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig84570:2..877+ (Macrocystis pyrifera P11B4 male)
CTTGCCCCTGATCGGTCCTGTTTTTTCGCCGGAACGAGTGCTGGCAACCG
GTACTTGGTGGACACTCGTCGATTCGACCCAACGCTTCGAGCCACCGCCC
ACCCTGACCCGATCAACGCCGTTGCATTTCCTGGGGGCACAGATGCGCTT
TTCTTGACGTGCTCCAAAGGAAACGTGCGTCTGTGGGACGCTGTGGAGCG
CACAGAGTTGCTCCGCATCCAAGTGCCAAACTTGCAATGTCTCTGTGTCG
CAGTCACACCTCGCGGCGATGCCATTCTCACCGGGTGGGATGATGGCAAG
GTGCGCAGCTTTGGTCCGGAATCTGGAAAACTGCAGTGGGTGATTCCAGA
CGCACACGCCGAGGCTGTGACGGCACTGGCAGTGGCACACAGTGGGAGAG
CGTTGGTGACAGGTGGTCGGGATGGCAGAGTGCGAGTGTGGGAGTTGGAT
ACAGGCGCGCACAAGATGCAGCTGAGTTTCAAGGAGCACAAGAAGGAAGT
GACTTCGATCGTCGTGGCGAAAGACGACACCGAGTGTGTTTCTTCCTCGG
CAGATGGGAGCTGTGTGGTGTGGAATTTGCGAAAGGGGACACGAGCAAAC
GCGCTCTTTGCCTCTACAGTCTTCCAGGCAGTTGCTTACTTCCCAGACGA
AGCGCAGCTCATTACAGTGGGCACTGATCGCAAAATCGGATACTGGGACA
CTGCCGATTGCACTCCGATTCGAATGCTGGAAGCCTCCACAAAAGCCCTC
ACTGGCCTCGATCTTGCAGAAGACGGCACTGTAGTGGTCACAGGCGGCGC
AGATCGAGCAGTAAAAGTGTGGCTCTACGATGAAGGCGTGCCCATTGCCC
ATGGCAAAGGACACAGTGGCACCATTCTTGCCCCTGATCGGTCCTGTTTT
TTCGCCGGAACGAGTGCTGGCAACCGGTACTTGGTGGACACTCGTCGATT
CGACCCAACGCTTCGAGCCACCGCCCACCCTGACCCGATCAACGCCGTTG
CATTTCCTGGGGGCACAGATGCGCTTTTCTTGACGTGCTCCAAAGGAAAC
GTGCGTCTGTGGGACGCTGTGGAGCGCACAGAGTTGCTCCGCATCCAAGT
GCCAAACTTGCAATGTCTCTGTGTCGCAGTCACACCTCGCGGCGATGCCA
TTCTCACCGGGTGGGATGATGGCAAGGTGCGCAGCTTTGGTCCGGAATCT
GGAAAACTGCAGTGGGTGATTCCAGACGCACACGCCGAGGCTGTGACGGC
ACTGGCAGTGGCACACAGTGGGAGAGCGTTGGTGACAGGTGGTCGGGATG
GCAGAGTGCGAGTGTGGGAGTTGGATACAGGCGCGCACAAGATGCAGCTG
AGTTTCAAGGAGCACAAGAAGGAAGTGACTTCGATCGTCGTGGCGAAAGA
CGACACCGAGTGTGTTTCTTCCTCGGCAGATGGGAGCTGTGTGGTGTGGA
ATTTGCGAAAGGGGACACGAGCAAACGCGCTCTTTGCCTCTACAGTCTTC
CAGGCAGTTGCTTACTTCCCAGACGAAGCGCAGCTCATTACAGTGGGCAC
TGATCGCAAAATCGGATACTGGGACACTGCCGATTGCACTCCGATTCGAA
TGCTGGAAGCCTCCACAAAAGCCCTCACTGGCCTCGATCTTGCAGAAGAC
GGCACTGTAGTGGTCACAGGCGGCGCAGATCGAGCAGTAAAAGTGTGGCT
CTACGATGAAGGCGTGCCCATTGCCCATGGCAAAGGACACAGTGGCACCA
TT
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