mRNA_M-pyrifera_M_contig8451.19709.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: D7FMI8_ECTSI (NPC1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI8_ECTSI) HSP 1 Score: 123 bits (309), Expect = 9.660e-32 Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 1 Query: 4 QRTDDLTGRSGRVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSF-ANGSAES 234 QR DDLTG S RVLQ DV VDGD ACRIY+SCKS+A+VGETTAMQSGLGLLKFQ+QTGAVGHGE+FF SF N SAES Sbjct: 194 QRRDDLTGGSSRVLQLDVNVDGDMACRIYESCKSIAVVGETTAMQSGLGLLKFQLQTGAVGHGEFFFPSFETNASAES 271
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: A0A835YTW9_9STRA (NPC1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 6.560e-20 Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 1 Query: 13 DDLTGRSGR-VLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSF 213 DDLTG + VLQADVV+D D AC +++SC + AI G +TAMQS +GLL+FQ+QTGA+GHGEYF+L+F Sbjct: 165 DDLTGAAQLPVLQADVVLDADYACAVFESCSATAIAGASTAMQSAVGLLQFQLQTGAIGHGEYFYLAF 232
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: H3H0H3_PHYRM (NPC1_N domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0H3_PHYRM) HSP 1 Score: 75.9 bits (185), Expect = 1.360e-14 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 7 RTDDLTGRSG-RVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSFANGSAESVVEDD 249 R D +TG+ +VL+ DV +D D C ++DSCK+ A+ AM+S LG L +QMQ GAVGHGEY L F N S ++ E D Sbjct: 178 RPDPMTGKEKVKVLELDVALDKDFTCAVFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYISLKF-NASKDASFEHD 258
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: A0A662XWU5_9STRA (NPC1_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWU5_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 6.070e-14 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 7 RTDDLTGRSG-RVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSFANGSAES 234 R D +TG+ +VL+ DV +D D C ++DSCK+ A+ AM+S LG L +QMQ GAVGHGE+ L+F N SA++ Sbjct: 86 RPDPMTGKERVKVLELDVALDKDFTCAVFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEFITLAF-NASADA 161
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: A0A3M6VMR4_9STRA (NPC1_N domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMR4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.840e-13 Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 7 RTDDLTGRSG-RVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSF 213 R D +TG+ +VL+ +V +D D C I+DSCK+ AIV AM+S LG L +QMQ GAVGHGEY + F Sbjct: 180 RPDPMTGKEKVKVLELNVALDKDFTCAIFDSCKNTAIVSMAAAMKSSLGFLNYQMQVGAVGHGEYIAMHF 249
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: K3X0G1_GLOUD (NPC1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0G1_GLOUD) HSP 1 Score: 73.6 bits (179), Expect = 1.950e-13 Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 7 RTDDLTGRSG-RVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSFAN 219 R D +TG +VL+ DV +D C +YDSCK+ AI M+S LG L +QMQTGA+GHGEY L F + Sbjct: 185 RLDPMTGEENVKVLEMDVTLDKPFTCALYDSCKNTAIASVAEGMKSSLGFLNYQMQTGAIGHGEYMLLHFTS 256
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: A0A8K1CL61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL61_PYTOL) HSP 1 Score: 73.2 bits (178), Expect = 2.560e-13 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 7 RTDDLTGRSG-RVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSF 213 R D +TG+ +VL+ DV + D C ++DSCK+ AI + AM+S LG L +QMQTGA+GHGEY L F Sbjct: 182 RPDPMTGKDHVKVLEMDVTLAKDFTCAVFDSCKNTAIASVSEAMKSSLGFLNYQMQTGAIGHGEYMHLHF 251
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: M4C709_HYAAE (NPC1_N domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C709_HYAAE) HSP 1 Score: 69.3 bits (168), Expect = 1.110e-12 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 7 RTDDLTGRSG-RVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSF 213 R D LTG +VL+ V +D D C I+DSCK+ A+ AM+S +G L +QMQ GAVGHGEY L F Sbjct: 86 RPDPLTGNERVKVLELFVALDKDFTCAIFDSCKNTAMASMAAAMKSSIGFLNYQMQVGAVGHGEYMTLHF 155
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: A0A5D6YG03_9STRA (NPC1_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YG03_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.350e-12 Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 7 RTDDLTGRSG-RVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSFANGS 225 R D +TG +VL+ V +D CR++DSC++ AI + AM+S LG L +Q+QTGAVGHG++ L FA+G+ Sbjct: 177 RPDPMTGEERVKVLELAVTLDKAFTCRLFDSCRNTAIASMSEAMKSSLGFLNYQVQTGAVGHGQFISLRFADGA 250
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Match: W2PHM0_PHYPN (NPC1_N domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PHM0_PHYPN) HSP 1 Score: 69.7 bits (169), Expect = 4.480e-12 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 7 RTDDLTGRSG-RVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGLLKFQMQTGAVGHGEYFFLSFANGSAESVVEDD 249 R D +TG+ +VL+ +V + D C I+DSCK+ A+ AM+S LG L +QMQ GAVGHGEY ++F N S + + D Sbjct: 178 RPDPMTGKEKVKVLELNVALAKDMTCAIFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYITMAF-NASKDKSFDHD 258 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8451.19709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8451.19709.1 >prot_M-pyrifera_M_contig8451.19709.1 ID=prot_M-pyrifera_M_contig8451.19709.1|Name=mRNA_M-pyrifera_M_contig8451.19709.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp MQRTDDLTGRSGRVLQADVVVDGDSACRIYDSCKSVAIVGETTAMQSGLGback to top mRNA from alignment at M-pyrifera_M_contig8451:1150..2176+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8451.19709.1 ID=mRNA_M-pyrifera_M_contig8451.19709.1|Name=mRNA_M-pyrifera_M_contig8451.19709.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1027bp|location=Sequence derived from alignment at M-pyrifera_M_contig8451:1150..2176+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8451:1150..2176+ >mRNA_M-pyrifera_M_contig8451.19709.1 ID=mRNA_M-pyrifera_M_contig8451.19709.1|Name=mRNA_M-pyrifera_M_contig8451.19709.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig8451:1150..2176+ (Macrocystis pyrifera P11B4 male)back to top |