mRNA_M-pyrifera_M_contig84479.19694.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84479.19694.1
Unique NamemRNA_M-pyrifera_M_contig84479.19694.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: A0A7Y2DFH2_9ACTN (Thymidine phosphorylase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DFH2_9ACTN)

HSP 1 Score: 389 bits (999), Expect = 1.250e-131
Identity = 206/292 (70.55%), Postives = 237/292 (81.16%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            SG+RLDL GL RPT+DKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKME+I GW   L  ++MR+ L+ IGGVIAGASAD+APADRK+Y+LRDVTGT+ SIPLIASSIMSKKIAEGT +L LDVK G GAFM D A A  LA TMV LG  +GVATSALVT MD +LGRA GN LEV+E+L+VLAG GP DV+ELT+ALA +ML L G+D +PA +LASG A+  FE+MVSAQGG L  G+P AE+R  + +   GFV  ++ARR G  AW LGAGRA K
Sbjct:   65 SGQRLDLSGLSRPTVDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMEAIPGWQAQLPPDRMRELLDSIGGVIAGASADLAPADRKMYALRDVTGTIESIPLIASSIMSKKIAEGTDALVLDVKVGRGAFMADFAAADELARTMVRLGNDHGVATSALVTRMDDVLGRAAGNALEVQESLDVLAGGGPPDVVELTLALAEEMLVLAGLDGNPAEVLASGEALAVFEKMVSAQGGSLDAGIPVAEYRETITAAEAGFVQSVDARRVGVGAWRLGAGRARK 356          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: A0A382AFG4_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382AFG4_9ZZZZ)

HSP 1 Score: 377 bits (968), Expect = 2.690e-128
Identity = 199/292 (68.15%), Postives = 231/292 (79.11%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            SG  LDL G+ RPT+DKHSTGGVGDK+SLILVPLVAACG AVPQLSGRGLGH GGTLDKME+IAGW   LT E+M  QL  +GG+IA AS D+ PADR+LY LRDVT TV SIPLIASSI+SKK+AEGT +L LDVKTGSGAFM D   A+ LA TMVELG  +GVAT AL+TGM  +LGRA GN LEV EA++VL G GP DV+E+T+ALAR+MLALV +D DPA +LA+G   E F+RMV+AQGGDLS GLP A HR  +V+P  G++  L+ R  G AAW LGAGRA K
Sbjct:   42 SGVTLDLSGVGRPTVDKHSTGGVGDKVSLILVPLVAACGPAVPQLSGRGLGHGGGTLDKMEAIAGWRAALTAEEMVSQLRDVGGMIAAASTDLNPADRRLYQLRDVTSTVDSIPLIASSIISKKVAEGTEALVLDVKTGSGAFMVDEDQARDLARTMVELGEDSGVATVALITGMHTVLGRAAGNALEVAEAIDVLEGRGPDDVVEVTLALAREMLALVEVDTDPAVVLATGEPREVFDRMVAAQGGDLSAGLPVAGHRQEIVAPTTGYLGRLDCRAVGVAAWRLGAGRARK 333          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: A0A800IFU5_9ACTN (Thymidine phosphorylase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IFU5_9ACTN)

HSP 1 Score: 380 bits (976), Expect = 3.370e-128
Identity = 200/292 (68.49%), Postives = 238/292 (81.51%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            SG  L LG L RPT+DKHSTGGVGDK+SLILVPLVAACGAAVPQLSGRGLGHTGGTLDKME+I+GW  +L++E+M  QL  +GG+IAGA++D+ P DR+LY+LRDVTGTVSSIPLIASSIMSKKIAEGT +L LDVK G+GAF+ +    + +AE MV LG  +GV T AL+T M+ +LGRA GN LEV E+LE+LAG GP+DVIE+TVALAR+MLALV ID DPA +LASG A+E FE+MVSAQGGDLS GLP AEH+  VV+   G++  L+ R  G AAW LGAGRA K
Sbjct:   66 SGASLQLGDLGRPTVDKHSTGGVGDKVSLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMEAISGWRASLSLEEMVTQLREVGGIIAGATSDLNPVDRRLYALRDVTGTVSSIPLIASSIMSKKIAEGTGALVLDVKVGAGAFLPEVERGRQVAEAMVALGEDHGVRTVALLTDMETVLGRAAGNALEVTESLEILAGGGPSDVIEITVALAREMLALVDIDIDPAEVLASGAALEVFEQMVSAQGGDLSAGLPVAEHQQQVVAQESGYLSRLDCRSVGVAAWRLGAGRARK 357          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: UPI001041919D (thymidine phosphorylase n=1 Tax=Frankia symbiont subsp. Datisca glomerata TaxID=2714109 RepID=UPI001041919D)

HSP 1 Score: 370 bits (949), Expect = 4.080e-125
Identity = 202/290 (69.66%), Postives = 231/290 (79.66%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGID--ADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAG 864
            SG+RLDL G+ RPT+DKHSTGGVGDK+SLILVPLVAACGAAVPQLSGRGLGHTGGTLDKME+I+GW  +++ E+MR  L  +GGVIA A   +APADRKLY+LRDVTGTV SIPLIASSIMSKKIAEGTS+L LDVK GSGAFMT  ADA+ LAETMV LG A GV T AL+TGMD  LG   G+ LEV EA++ L G GPAD+IE+TVALAR MLALVG+D  ADPA +LA+G A   + RMV+AQGGD    LP AEH   V + A GF+ GL+AR  G AAW LGAG
Sbjct:   67 SGDRLDLAGVGRPTVDKHSTGGVGDKVSLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMEAISGWRASVSPERMRSVLRDVGGVIAAAGPGLAPADRKLYALRDVTGTVESIPLIASSIMSKKIAEGTSALVLDVKVGSGAFMTAHADARTLAETMVTLGEAAGVRTEALLTGMDTPLGWTAGHALEVAEAVDTLCGGGPADLIEITVALARRMLALVGLDGGADPADVLAAGTAYPVWRRMVAAQGGDPDAALPTAEHVEIVSASASGFLHGLDARAVGVAAWRLGAG 356          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: UPI0010413D14 (thymidine phosphorylase n=2 Tax=Frankia TaxID=1854 RepID=UPI0010413D14)

HSP 1 Score: 372 bits (954), Expect = 7.520e-125
Identity = 201/294 (68.37%), Postives = 231/294 (78.57%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDA--DPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            SGERLDL GL RPT+DKHSTGGVGDK+SL+LVPLVAACGAAVPQL+GRGLGHTGGTLDKME+I GW  +L+ E+MR  L  +GGVIA A A +APADRKLY+LRDVTGTV SIPLIASSIMSKKIAEGTS+L LDVK GSGAFMT +A A+ LAETMV LG A GV T AL+TGMD  LGR  GN LEV EA+E L G GPAD++E+TVALAR ML L G++   DPA +LA+G A + + RMV+AQGGD    LP A H   V +P  GF+  L+AR  G AAW LGAGR+ K
Sbjct:   67 SGERLDLSGLGRPTVDKHSTGGVGDKVSLVLVPLVAACGAAVPQLAGRGLGHTGGTLDKMEAIPGWQASLSSERMRSVLTDVGGVIAAAGAGLAPADRKLYALRDVTGTVESIPLIASSIMSKKIAEGTSALVLDVKVGSGAFMTAQAQARALAETMVTLGDAAGVRTEALLTGMDAPLGRTAGNALEVVEAVETLRGGGPADLVEVTVALARRMLVLAGLEGGPDPADVLAAGKAYDVWRRMVTAQGGDPDAALPVAGHVETVPAPVTGFLCSLDARAVGVAAWRLGAGRSRK 360          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: UPI00040ABE13 (thymidine phosphorylase n=1 Tax=Nakamurella lactea TaxID=459515 RepID=UPI00040ABE13)

HSP 1 Score: 370 bits (950), Expect = 3.140e-124
Identity = 199/292 (68.15%), Postives = 231/292 (79.11%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            SG RLDL  + RPT+DKHSTGGVGDKISL L PLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGW+P L+   M  QL ++G VI  ASAD+APADRKLY+LRDVT TV SIP+IA+SIMSKKIAEGT +L LDVK GSGAFM DR  A+ LA TMVELG A+GV+T+AL+T M + LG AVGN +EV E+LEVLAG GPADV+ELT+ALA +M+AL G+DADPA +LASG AM+ +  MVSAQGGD    LP  +H   V + + G V G++A   G AAW LGAGRA K
Sbjct:   70 SGIRLDLSTVGRPTVDKHSTGGVGDKISLPLAPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWNPLLSATSMTAQLAQVGAVICAASADLAPADRKLYALRDVTSTVESIPMIAASIMSKKIAEGTDALVLDVKVGSGAFMKDRESARRLARTMVELGAAHGVSTTALLTDMSVPLGLAVGNAVEVAESLEVLAGGGPADVVELTLALATEMVALAGLDADPAEVLASGRAMDRWRAMVSAQGGDPDAPLPAPKHTRVVTAESSGVVTGMDALAVGTAAWRLGAGRARK 361          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: UPI001031E49A (thymidine phosphorylase n=1 Tax=Acidipropionibacterium timonense TaxID=2161818 RepID=UPI001031E49A)

HSP 1 Score: 368 bits (944), Expect = 2.230e-123
Identity = 197/292 (67.47%), Postives = 227/292 (77.74%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            SGER+D   L RPT+DKHSTGGVGDKI+L L PLVAACGAAVPQLSGRGLGHTGGTLDKME+IAGW  +LT ++M  QL  +G VI  A   +APAD+KLY+LRDVTGTV SIPLIASSIMSKKIAEGT +L LDVKTGSGAFM    D++ LA  +V LGTA GVAT+AL+T MD+ LG A GNG+E+ EALEVLAG GPADV+ELTVALA  M+   G+DADPA +LASG AME + RMV+AQGGD    LP A H   V++P  G V G++A   G AAW LGAGRA K
Sbjct:   68 SGERMDFSTLSRPTVDKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGHTGGTLDKMEAIAGWRADLTHDEMLTQLEEVGAVICAAGPGLAPADKKLYALRDVTGTVESIPLIASSIMSKKIAEGTGALVLDVKTGSGAFMKSLDDSRELARRLVALGTAAGVATTALITRMDVPLGYACGNGIEIAEALEVLAGRGPADVVELTVALATQMVRAAGLDADPAQVLASGQAMEVWRRMVAAQGGDPDAKLPVARHGQDVMAPRGGIVTGIDAMSVGIAAWRLGAGRARK 359          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: A0A5Q2RN79_9ACTN (Thymidine phosphorylase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RN79_9ACTN)

HSP 1 Score: 367 bits (942), Expect = 4.640e-123
Identity = 200/292 (68.49%), Postives = 228/292 (78.08%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            SG RLDL  + RPT+DKHSTGGVGDKISLIL PLVAACGAAVPQLSGRGLGHTGGTLDK+ESI GW   L  + M DQ+  IG VI GASAD+APADRKLY+LRDVTGTV +IPLIASSIMSKKIAEGT +L LDVK GSGAF+ D A A+ LA TMVELG A+ V TSAL+T MD  LG   GN LEV E+++VLAG GP+DV+E+T+ALAR+ML L GIDADPA  LA G AM+ + RM++AQGGD    LP A H   V +PADG +  L+AR  G AAW LGAGRA K
Sbjct:   67 SGVRLDLSPVGRPTVDKHSTGGVGDKISLILCPLVAACGAAVPQLSGRGLGHTGGTLDKLESIPGWQALLPTQAMIDQMRDIGAVICGASADLAPADRKLYALRDVTGTVEAIPLIASSIMSKKIAEGTDALVLDVKVGSGAFLPDIAMARELARTMVELGAAHDVRTSALLTDMDTPLGLTAGNALEVRESVDVLAGGGPSDVVEITLALAREMLDLAGIDADPAAALADGRAMDVWRRMITAQGGDPDAELPVARHVETVTAPADGRLQRLDARAVGIAAWRLGAGRARK 358          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: A0A2E9W1T3_9ACTN (Thymidine phosphorylase n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9W1T3_9ACTN)

HSP 1 Score: 366 bits (939), Expect = 1.280e-122
Identity = 196/292 (67.12%), Postives = 230/292 (78.77%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            SG RLDLGG+  PT+DKHSTGGVGDK+SLILVPLVAACGAAVPQLSGRGLGH+GGTLDKME+I+GW  +L+V++M DQ+ R+GGVIAGA+ DI+PADR+LY+LRDVT TV S+PLIASSIMSKKIAEGT SL LDVK GSGAFM +   A+ LA TMV LG  NGV T AL+T M  +LGR  GN LEV E+LEVL G GPAD++E+T+ALA +M+AL G+DADPA +LASG   E FE MV AQGGDLS  LP A H   V +   G++  L+    G AAW LGAGRA K
Sbjct:   66 SGSRLDLGGVGMPTVDKHSTGGVGDKVSLILVPLVAACGAAVPQLSGRGLGHSGGTLDKMEAISGWRASLSVDEMVDQMRRVGGVIAGATEDISPADRRLYALRDVTATVDSVPLIASSIMSKKIAEGTESLVLDVKFGSGAFMPELDRARDLARTMVGLGEGNGVRTVALITAMHTVLGRTAGNALEVVESLEVLEGGGPADLVEVTLALADEMVALAGLDADPAAVLASGRPREVFEEMVVAQGGDLSVDLPTAPHVEVVTADEAGWLGRLDCLSVGIAAWRLGAGRARK 357          
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Match: A0A349B2U3_9ACTN (Thymidine phosphorylase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B2U3_9ACTN)

HSP 1 Score: 365 bits (938), Expect = 1.810e-122
Identity = 197/292 (67.47%), Postives = 229/292 (78.42%), Query Frame = 1
Query:    1 SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGLGHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKLYSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADAKLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNGPADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLSQGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK 876
            +GER DL  LDRPT+DKHSTGGVGDKISLILVPLVAACGAAVPQL+GRGLGHTGGTLDK+E+IAG+   L  ++ R  L  +GGVIAGAS DIAPADRKLY+LRDVT TV SIPLIASSIMSKKIAEGTS L LDVK GSG+F+ D    ++LAETMV +G  NGV T AL+T MD  LGRA GN LEV+E+L+VLAG GPADV ELT+ALAR+ML + GID DP P+L  G AME FER+V+AQGGDLS  LP + H   V +  DG++  ++ +  G A W LGAGRA K
Sbjct:   67 TGERADLSFLDRPTVDKHSTGGVGDKISLILVPLVAACGAAVPQLAGRGLGHTGGTLDKLEAIAGFQSVLPADRYRQVLADVGGVIAGASGDIAPADRKLYALRDVTATVESIPLIASSIMSKKIAEGTSGLVLDVKLGSGSFLGDDDATRVLAETMVGIGNGNGVDTVALLTDMDQPLGRAAGNALEVQESLDVLAGGGPADVRELTLALAREMLGIAGIDTDPEPVLDDGRAMEAFERIVAAQGGDLSVALPTSAHAHVVAAERDGWLQRMDCKAVGIAVWRLGAGRARK 358          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84479.19694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2DFH2_9ACTN1.250e-13170.55Thymidine phosphorylase n=1 Tax=Acidimicrobiales b... [more]
A0A382AFG4_9ZZZZ2.690e-12868.15Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A800IFU5_9ACTN3.370e-12868.49Thymidine phosphorylase n=1 Tax=Acidimicrobiia bac... [more]
UPI001041919D4.080e-12569.66thymidine phosphorylase n=1 Tax=Frankia symbiont s... [more]
UPI0010413D147.520e-12568.37thymidine phosphorylase n=2 Tax=Frankia TaxID=1854... [more]
UPI00040ABE133.140e-12468.15thymidine phosphorylase n=1 Tax=Nakamurella lactea... [more]
UPI001031E49A2.230e-12367.47thymidine phosphorylase n=1 Tax=Acidipropionibacte... [more]
A0A5Q2RN79_9ACTN4.640e-12368.49Thymidine phosphorylase n=1 Tax=Actinomarinicola t... [more]
A0A2E9W1T3_9ACTN1.280e-12267.12Thymidine phosphorylase n=4 Tax=Actinobacteria Tax... [more]
A0A349B2U3_9ACTN1.810e-12267.47Thymidine phosphorylase n=1 Tax=Acidimicrobiaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84479contigM-pyrifera_M_contig84479:2..877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score367.9
Seed ortholog evalue4.5e-99
Seed eggNOG ortholog679197.HMPREF9336_04180
Preferred namedeoA
KEGG rclassRC00063
KEGG koko:K00758
KEGG ReactionR01570,R02484,R08222,R08230
KEGG Pathwayko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.phosphorylase
EggNOG OGs2GJH5@201174,COG0213@1,COG0213@2
EC2.4.2.4
COG Functional cat.F
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size876
Cds size876
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816752.1200929-CDS-M-pyrifera_M_contig84479:1..8771622816752.1200929-CDS-M-pyrifera_M_contig84479:1..877Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84479 2..877 +
1692278157.31024-CDS-M-pyrifera_M_contig84479:1..8771692278157.31024-CDS-M-pyrifera_M_contig84479:1..877Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84479 2..877 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84479.19694.1prot_M-pyrifera_M_contig84479.19694.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84479 2..877 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84479.19694.1

>prot_M-pyrifera_M_contig84479.19694.1 ID=prot_M-pyrifera_M_contig84479.19694.1|Name=mRNA_M-pyrifera_M_contig84479.19694.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
SGERLDLGGLDRPTLDKHSTGGVGDKISLILVPLVAACGAAVPQLSGRGL
GHTGGTLDKMESIAGWSPNLTVEQMRDQLNRIGGVIAGASADIAPADRKL
YSLRDVTGTVSSIPLIASSIMSKKIAEGTSSLTLDVKTGSGAFMTDRADA
KLLAETMVELGTANGVATSALVTGMDLILGRAVGNGLEVEEALEVLAGNG
PADVIELTVALARDMLALVGIDADPAPLLASGHAMETFERMVSAQGGDLS
QGLPRAEHRLHVVSPADGFVIGLEARRDGGAAWMLGAGRAHK
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mRNA from alignment at M-pyrifera_M_contig84479:2..877+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84479.19694.1 ID=mRNA_M-pyrifera_M_contig84479.19694.1|Name=mRNA_M-pyrifera_M_contig84479.19694.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig84479:2..877+ (Macrocystis pyrifera P11B4 male)
TCCGGCGAACGCCTCGATCTCGGCGGACTCGACCGGCCGACCCTCGACAA GCATTCGACCGGTGGTGTCGGCGACAAGATCTCCCTGATTCTCGTCCCGC TCGTGGCTGCATGCGGAGCAGCCGTCCCACAACTGTCGGGCCGTGGCCTC GGCCACACGGGAGGAACCCTCGACAAGATGGAATCGATTGCAGGCTGGAG TCCGAACCTCACGGTCGAGCAGATGCGGGACCAGCTGAACCGGATCGGCG GAGTGATCGCCGGCGCATCGGCCGACATCGCTCCGGCCGACCGCAAGCTC TATTCGTTGCGTGACGTCACCGGCACCGTGTCATCGATCCCGCTGATCGC CAGCTCGATCATGTCGAAGAAGATCGCCGAGGGCACGTCGTCGCTGACGC TCGACGTGAAGACCGGCAGCGGCGCATTCATGACCGATCGAGCCGACGCC AAGCTGCTGGCCGAGACCATGGTCGAACTGGGCACGGCGAACGGTGTCGC AACCTCGGCCTTGGTGACAGGCATGGACCTCATCCTCGGGCGTGCCGTCG GCAACGGCCTCGAAGTCGAAGAAGCACTCGAGGTGCTCGCCGGCAACGGG CCTGCCGATGTGATCGAACTCACGGTGGCCCTGGCACGGGACATGCTGGC GCTCGTCGGCATCGATGCCGATCCTGCCCCTCTGCTGGCCTCGGGACACG CCATGGAGACCTTCGAGCGCATGGTGTCGGCGCAAGGTGGCGATCTTTCC CAGGGTTTGCCGCGGGCCGAACACCGGCTCCACGTCGTCTCGCCGGCCGA TGGCTTCGTGATCGGGCTCGAGGCCAGGCGGGACGGTGGCGCGGCGTGGA TGCTGGGTGCCGGGCGGGCGCACAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84479:2..877+

>mRNA_M-pyrifera_M_contig84479.19694.1 ID=mRNA_M-pyrifera_M_contig84479.19694.1|Name=mRNA_M-pyrifera_M_contig84479.19694.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig84479:2..877+ (Macrocystis pyrifera P11B4 male)
TCCGGCGAACGCCTCGATCTCGGCGGACTCGACCGGCCGACCCTCGACAA
GCATTCGACCGGTGGTGTCGGCGACAAGATCTCCCTGATTCTCGTCCCGC
TCGTGGCTGCATGCGGAGCAGCCGTCCCACAACTGTCGGGCCGTGGCCTC
GGCCACACGGGAGGAACCCTCGACAAGATGGAATCGATTGCAGGCTGGAG
TCCGAACCTCACGGTCGAGCAGATGCGGGACCAGCTGAACCGGATCGGCG
GAGTGATCGCCGGCGCATCGGCCGACATCGCTCCGGCCGACCGCAAGCTC
TATTCGTTGCGTGACGTCACCGGCACCGTGTCATCGATCCCGCTGATCGC
CAGCTCGATCATGTCGAAGAAGATCGCCGAGGGCACGTCGTCGCTGACGC
TCGACGTGAAGACCGGCAGCGGCGCATTCATGACCGATCGAGCCGACGCC
AAGCTGCTGGCCGAGACCATGGTCGAACTGGGCACGGCGAACGGTGTCGC
AACCTCGGCCTTGGTGACAGGCATGGACCTCATCCTCGGGCGTGCCGTCG
GCAACGGCCTCGAAGTCGAAGAAGCACTCGAGGTGCTCGCCGGCAACGGG
CCTGCCGATGTGATCGAACTCACGGTGGCCCTGGCACGGGACATGCTGGC
GCTCGTCGGCATCGATGCCGATCCTGCCCCTCTGCTGGCCTCGGGACACG
CCATGGAGACCTTCGAGCGCATGGTGTCGGCGCAAGGTGGCGATCTTTCC
CAGGGTTTGCCGCGGGCCGAACACCGGCTCCACGTCGTCTCGCCGGCCGA
TGGCTTCGTGATCGGGCTCGAGGCCAGGCGGGACGGTGGCGCGGCGTGGA
TGCTGGGTGCCGGGCGGGCGCACAAGTCCGGCGAACGCCTCGATCTCGGC
GGACTCGACCGGCCGACCCTCGACAAGCATTCGACCGGTGGTGTCGGCGA
CAAGATCTCCCTGATTCTCGTCCCGCTCGTGGCTGCATGCGGAGCAGCCG
TCCCACAACTGTCGGGCCGTGGCCTCGGCCACACGGGAGGAACCCTCGAC
AAGATGGAATCGATTGCAGGCTGGAGTCCGAACCTCACGGTCGAGCAGAT
GCGGGACCAGCTGAACCGGATCGGCGGAGTGATCGCCGGCGCATCGGCCG
ACATCGCTCCGGCCGACCGCAAGCTCTATTCGTTGCGTGACGTCACCGGC
ACCGTGTCATCGATCCCGCTGATCGCCAGCTCGATCATGTCGAAGAAGAT
CGCCGAGGGCACGTCGTCGCTGACGCTCGACGTGAAGACCGGCAGCGGCG
CATTCATGACCGATCGAGCCGACGCCAAGCTGCTGGCCGAGACCATGGTC
GAACTGGGCACGGCGAACGGTGTCGCAACCTCGGCCTTGGTGACAGGCAT
GGACCTCATCCTCGGGCGTGCCGTCGGCAACGGCCTCGAAGTCGAAGAAG
CACTCGAGGTGCTCGCCGGCAACGGGCCTGCCGATGTGATCGAACTCACG
GTGGCCCTGGCACGGGACATGCTGGCGCTCGTCGGCATCGATGCCGATCC
TGCCCCTCTGCTGGCCTCGGGACACGCCATGGAGACCTTCGAGCGCATGG
TGTCGGCGCAAGGTGGCGATCTTTCCCAGGGTTTGCCGCGGGCCGAACAC
CGGCTCCACGTCGTCTCGCCGGCCGATGGCTTCGTGATCGGGCTCGAGGC
CAGGCGGGACGGTGGCGCGGCGTGGATGCTGGGTGCCGGGCGGGCGCACA
AG
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