mRNA_M-pyrifera_M_contig84418.19684.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: A0A4D9CZ29_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ29_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.250e-8 Identity = 38/95 (40.00%), Postives = 48/95 (50.53%), Query Frame = 1 Query: 34 VFNELEAAGGDDRAAV-WLGQRLYWGRGGVQRDPVRAAQYFQGAAAQGNRVAEYNLGVMQLRGE-----GGMEPNHRQALRHFARAADAGYAPAL 300 + + A G+D A+ W Q LYWGR GV D V A + + AA GN A+YN G+M LRGE G E + RAA G+ PAL Sbjct: 794 AYMRMRAKDGEDAEALAWYAQALYWGRHGVHPDRVAAERMMERAAVLGNAEAQYNAGIMLLRGEDRPGEGAAEQRAARGEELVDRAARQGFFPAL 888
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: W7TFF4_9STRA (Tetratricopeptide-like helical n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFF4_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.090e-7 Identity = 37/95 (38.95%), Postives = 47/95 (49.47%), Query Frame = 1 Query: 34 VFNELEAAGGDDRAAV-WLGQRLYWGRGGVQRDPVRAAQYFQGAAAQGNRVAEYNLGVMQLRGE-----GGMEPNHRQALRHFARAADAGYAPAL 300 + + A G D A+ W Q LYWG+ GV D V A + + AA GN A+YN G+M LRGE G E + RAA G+ PAL Sbjct: 414 AYMRMRAEDGQDAEALAWYAQALYWGKHGVHPDRVAAERMMERAAELGNAEAQYNAGIMLLRGEDRPGEGAAEQRVARGEELVDRAARQGFFPAL 508
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: A0A7S0T3A5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T3A5_9RHOD) HSP 1 Score: 54.3 bits (129), Expect = 4.980e-7 Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 115 GVQRDPVRAAQYFQGAAAQGNRVAEYNLGVMQLRGEGGMEPNHRQALRHFARAADAGY 288 GV+RD AA+ F+ AAA G+ A YNLGV+QLRG+GG++ + QA F AA G+ Sbjct: 60 GVERDANAAARKFKEAAALGSAEAMYNLGVLQLRGDGGVDQSPPQAFASFVAAARRGH 117
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: A0A4Y8RNP0_9HYPH (Sel1 repeat family protein n=2 Tax=Jiella endophytica TaxID=2558362 RepID=A0A4Y8RNP0_9HYPH) HSP 1 Score: 55.1 bits (131), Expect = 1.710e-6 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 109 RGGVQRDPVRAAQYFQGAAAQGNRVAEYNLGVMQLRGEGGMEPNHRQALRHFARAADAGYAPALTGLADAHLN 327 + G RDP RAA + AA +G VA N+G G+G + N +ALR F RAA AG PA+T LA+AHL+ Sbjct: 387 KSGPDRDPARAALLHRKAAGKGLMVAVANVGFDLWHGDG-VNENRPEALRWFERAAQAGSVPAMTMLAEAHLD 458
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: Q2WAU9_MAGSA (TPR repeat SEL1 subfamily n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) TaxID=342108 RepID=Q2WAU9_MAGSA) HSP 1 Score: 54.3 bits (129), Expect = 2.390e-6 Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 1 Query: 61 GDDRAAVWLGQRLYWGRGGVQRDPVRAAQYFQGAAAQGNRVAEYNLGVMQLRGEGGMEPNHRQALRHFARAADAGYAPA 297 GD AA LG LY GV+ D AA ++Q AA G AEYNLG++ LRG G+ + + +R +AA+AGY PA Sbjct: 66 GDGEAARNLGH-LYRQGLGVEADGHMAAAWYQVAADAGVVSAEYNLGMLYLRGGPGLPGDQAEGMRRLGKAAEAGYLPA 143
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: UPI0018D16374 (caspase family protein n=1 Tax=Methylobrevis albus TaxID=2793297 RepID=UPI0018D16374) HSP 1 Score: 54.3 bits (129), Expect = 3.180e-6 Identity = 32/89 (35.96%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 34 VFNELEAAGGDDRAAVWLGQRLYWGRG-GVQRDPVRAAQYFQGAAAQGNRVAEYNLGVMQLRGEGGMEPNHRQALRHFARAADAGYAPA 297 +N L A +D A + ++ +G GV +DPV+A + F AA +G+ +YN+GVM+L G+ G+E ++R+AL+ +A YA A Sbjct: 350 AYNRLAMA--EDYLAAYHNMGNHYKKGAGVPKDPVKAMELFLYAAERGHPEDQYNVGVMRLNGDTGIEVDYREALKWLTASAKQDYASA 436
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: A0A6J0SI95_9SAUR (protein sel-1 homolog 3 n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0SI95_9SAUR) HSP 1 Score: 54.3 bits (129), Expect = 3.340e-6 Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 28 LKVFNELEAAGGDDRAAVWLGQRLYWGRGGVQRDPVRAAQYF-QGAAAQGNRVAEYNLGVMQLRGEGGMEPNHRQALRHFARAADAGYAPALTGL 309 L ++ + EAA GD A LGQ L+WG+ GVQ++P A +++ +GA + ++ Y+ ++ +G+G ++ N R A++ +AA G A+ GL Sbjct: 649 LFMWLKHEAARGDAAAQQRLGQMLFWGQQGVQKNPKAAVEWYAKGALETEDLISIYDYSIVLFKGQG-VKKNRRLAVQLMRKAASKGLPQAVNGL 742
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: A0A7S2WTQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ3_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 3.580e-6 Identity = 28/46 (60.87%), Postives = 31/46 (67.39%), Query Frame = 1 Query: 172 GNRVAEYNLGVMQLRGEGGMEPNHRQALRHFARAADAGYAPALTGL 309 G+ A YNLGVMQL GEG PN R+A F +AAD GY PA TGL Sbjct: 1 GDGEALYNLGVMQLNGEGPFTPNPREAENLFQQAADQGYGPAHTGL 46
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: A0A1W6CP90_9PROT (SPOR domain-containing protein n=2 Tax=Magnetospirillum sp. ME-1 TaxID=1639348 RepID=A0A1W6CP90_9PROT) HSP 1 Score: 52.8 bits (125), Expect = 8.070e-6 Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 61 GDDRAAVWLGQRLYWGRGGVQRDPVRAAQYFQGAAAQGNRVAEYNLGVMQLRGEGGMEPNHRQALRHFARAADAGYAPA 297 GD AA LG LY GV+ D AA ++Q AA G A+YNLG++ LRG G+ P+ Q + +AA AGY PA Sbjct: 66 GDHEAARNLGH-LYRQGLGVEADGHIAAAWYQVAADGGVISADYNLGMLYLRGGPGLPPDKEQGMARLGKAAAAGYIPA 143
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Match: UPI00192F1EFE (protein sel-1 homolog 3 isoform X1 n=2 Tax=Crotalus tigris TaxID=88082 RepID=UPI00192F1EFE) HSP 1 Score: 52.4 bits (124), Expect = 1.520e-5 Identity = 31/88 (35.23%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 49 EAAGGDDRAAVWLGQRLYWGRGGVQRDPVRAAQYF-QGAAAQGNRVAEYNLGVMQLRGEGGMEPNHRQALRHFARAADAGYAPALTGL 309 EA GD A LGQ L+WG+ GV+++ A +++ QGA + V+ ++ ++ +G+G ++ N R ALR +AA G+ A+ GL Sbjct: 176 EAVRGDSAAQQRLGQMLFWGQQGVEKNLKAAVEWYAQGALGNEDPVSLFDYSIVLFKGQG-VKRNKRLALRLMKKAASKGFPQAVNGL 262 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84418.19684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84418.19684.1 >prot_M-pyrifera_M_contig84418.19684.1 ID=prot_M-pyrifera_M_contig84418.19684.1|Name=mRNA_M-pyrifera_M_contig84418.19684.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp MGERGDEDSLKVFNELEAAGGDDRAAVWLGQRLYWGRGGVQRDPVRAAQYback to top mRNA from alignment at M-pyrifera_M_contig84418:442..768+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84418.19684.1 ID=mRNA_M-pyrifera_M_contig84418.19684.1|Name=mRNA_M-pyrifera_M_contig84418.19684.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig84418:442..768+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84418:442..768+ >mRNA_M-pyrifera_M_contig84418.19684.1 ID=mRNA_M-pyrifera_M_contig84418.19684.1|Name=mRNA_M-pyrifera_M_contig84418.19684.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig84418:442..768+ (Macrocystis pyrifera P11B4 male)back to top |