mRNA_M-pyrifera_M_contig84414.19683.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84414.19683.1
Unique NamemRNA_M-pyrifera_M_contig84414.19683.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A2E7KDZ3_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KDZ3_9PLAN)

HSP 1 Score: 488 bits (1256), Expect = 1.570e-165
Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 1
Query:    1 GIEFVKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLAELKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            GIEFVKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQR LKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLAELKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF
Sbjct:  587 GIEFVKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRGLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLAELKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 844          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A518ACP0_9PLAN (Uncharacterized protein n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ACP0_9PLAN)

HSP 1 Score: 333 bits (854), Expect = 1.780e-105
Identity = 178/257 (69.26%), Postives = 210/257 (81.71%), Query Frame = 1
Query:    4 IEFVKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLAELKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            I FV+QLGTVQDVHLTN+LGWAY GNRQFQQAL EF KAS+MPG VA RGSIQR +KLC+QQL++K  + +    ETPQRNLQIAQAFWKLT+YRKAQRYAQKV+E++ A     D+A LILARF LI GQ EQAT +LKQIQ+ +  E + ++ERLELEK L  L P+Q+ A+LKL +LY+SEGIPGKAL LLS+AH   PD++QILQRLAELQLFYHLLPEAEASY +L+Q SP D DV+ ALKKIA LKQ+P F
Sbjct:  588 ISFVEQLGTVQDVHLTNFLGWAYAGNRQFQQALDEFVKASRMPGQVAIRGSIQRGIKLCQQQLASKD-DDQSPPAETPQRNLQIAQAFWKLTYYRKAQRYAQKVVEAEKATPDVRDQAHLILARFALITGQTEQATEELKQIQNRQTPEVERVTERLELEKSLTALPPNQRAAILKLVALYKSEGIPGKALALLSRAHKQIPDDQQILQRLAELQLFYHLLPEAEASYQRLQQLSPHDPDVDTALKKIAALKQMPHF 843          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A517WSD4_9PLAN (Tetratricopeptide repeat protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WSD4_9PLAN)

HSP 1 Score: 224 bits (571), Expect = 3.050e-64
Identity = 123/264 (46.59%), Postives = 177/264 (67.05%), Query Frame = 1
Query:    4 IEFVKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLAEL-------KPDQQEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            I FVK+L  V DV + N+LGWAYVG  QF+QAL EFTKA++MPG      SI+R + L E++L++K  + +    ETP+ NL+IA+ +WKL  + KA  Y QKVL+S NA +   +KA L++AR  LING+  QA  +L +IQ  EN+E   L + ++LEK +A L          Q +++ +L S+YQ+EG+PGKAL LL++AH L P+N ++L+ LA+ QLFYH +PEAEA+YL L++  P D ++  AL KI  L++ P F
Sbjct:  588 ISFVKELPEVSDVRIVNFLGWAYVGKHQFKQALQEFTKATRMPGQRLISQSIRRGMMLSEKRLADKNGSGELAPSETPKNNLRIAEEYWKLAHFDKAHEYTQKVLDSDNASKVEIEKAHLLMARLHLINGRTAQALEELNRIQSTENQEANRLLDMIKLEKSIASLFEIGQLLDQRQLDSLFQLVSIYQAEGVPGKALKLLAQAHELAPENLEVLKLLAKYQLFYHKIPEAEANYLTLQKTMPEDQEIKDALTKIETLQKAPHF 851          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A517RLA8_9PLAN (Tetratricopeptide repeat protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RLA8_9PLAN)

HSP 1 Score: 210 bits (534), Expect = 4.930e-59
Identity = 118/272 (43.38%), Postives = 170/272 (62.50%), Query Frame = 1
Query:    4 IEFVKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLAEL---------------KPDQQEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            I FV+ L  V DV + N+LGWAY+G R++ +AL EF+KA +MPG  +   SI R   L ++QL+        +    P RNLQIA+ +WKL+ + +  ++ QKV ++  + +   D+A ++LAR  LI G+ +QA  +LKQ+   EN E   L +R+ LE+ L++L                P QQ A+ KL S+Y+SEGIPGKAL LL +AH  TP N +IL+ LA+ QLFY+L+PEAE SYL L++ +P D +V AAL+KI  LK+ P F
Sbjct:  573 ISFVEALPEVSDVRIVNFLGWAYIGQREYPKALQEFSKALRMPGQSSISLSIHRGRDLAQKQLTKNTVPASPDKSGEPGRNLQIAKEYWKLSDFDRVLKFTQKVFDANKSSQAELDQAHVLLARLHLIKGETQQAVEELKQVSTTENAEANELRDRIHLEESLSDLLNLPPHQKTEITDGLDPKQQAAIQKLVSIYESEGIPGKALRLLEQAHMKTPLNEKILKLLAKFQLFYNLVPEAEVSYLTLQEMNPDDQEVAAALEKIETLKKTPHF 844          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A6BYN2_9PLAN (Uncharacterized protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A6BYN2_9PLAN)

HSP 1 Score: 189 bits (480), Expect = 1.970e-51
Identity = 111/274 (40.51%), Postives = 165/274 (60.22%), Query Frame = 1
Query:    4 IEFVKQLGT--VQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKML---------------AELKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            I+ +++L    ++D+ +   LGW+YVG ++++ AL EF +AS MP     R +IQR     +  L  KA   +      P + L IA+ +W+L  Y  A +Y QKVL+SQ+A +Q  D AR++ AR  L+NG PEQA A LK I D EN+   +L   +E E+                  +L  + ++++LKLA++Y+SEG+PGKAL LL +AHAL PD  +I ++LA+ QLFY++L +AE +YL L+Q SP D DV  +L KI  LK  P+F
Sbjct:  588 IQLIQELQKKQIEDIRVVCLLGWSYVGVKEYESALVEFKRASLMPNSKLHRNNIQRGYDHAQNMLKQKAGPDEIEEENGPAKMLLIAENYWRLARYEHAMKYVQKVLDSQDATKQDRDTARVLEARLHLLNGHPEQALAALKNISDPENEATVTLQTLIEQEQYFNKFFKGQSRSEEFQNQQLDSETRDSILKLAAIYESEGVPGKALRLLERAHALDPDQVEIRKQLAKYQLFYNMLSQAEENYLVLQQQSPDDQDVQDSLSKIEQLKITPRF 861          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A517VFE1_9PLAN (Uncharacterized protein n=2 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VFE1_9PLAN)

HSP 1 Score: 187 bits (475), Expect = 9.710e-51
Identity = 111/274 (40.51%), Postives = 165/274 (60.22%), Query Frame = 1
Query:    4 IEFVKQLGTVQ--DVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLAELKPDQ---------------QEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            IE +++L   Q  DV +    GWAYVG +Q++ AL EF KAS MP     RG+IQR  +  ++ L  K  + +      P ++L IA  +WKL  Y  A +Y QK+LES+ A EQ  D AR++ AR  L+NG P+QA + LK+I D E+++  +L   ++ E+   +L   Q               ++++LKLA++YQSEG+PGKAL LL +AH   PD+ ++ ++LA+LQLFY++L  AE +YL LKQ  P D ++  +L KI  +K VP F
Sbjct:  588 IELIQELQKKQINDVRIVCLQGWAYVGIKQYEIALDEFRKASLMPNSKLHRGNIQRGYEYAQKMLEQKKDSDQGQKDAEPDKDLVIAGNYWKLARYEHAMKYVQKILESEVATEQDKDSARILQARLYLVNGHPDQALSGLKKISDTEHEDASTLVTMIQQEQFFNKLFEGQSRSPEFQNQRWDSETRDSLLKLAAIYQSEGVPGKALRLLGRAHEYDPDDSEVRKQLAKLQLFYNMLSHAEENYLILKQQFPDDQEIQDSLSKIEQIKTVPHF 861          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A355G887_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G887_9PLAN)

HSP 1 Score: 186 bits (473), Expect = 1.850e-50
Identity = 108/267 (40.45%), Postives = 161/267 (60.30%), Query Frame = 1
Query:   19 QLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLAE---------------LKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            Q   +QDV +   LGW+Y GN+Q+Q+A+ EF KAS +P     R +IQR  +  +   + K  + K  +   P++NLQIA+ +WKL  Y +A +  QKVL S  A EQ  D AR++ AR  L +GQ  QA ++LK+I+D ENK   +L   ++ E+ L E               L+   +E++LKL ++Y+SEG+PGKAL LL +AH L P++ +I ++LA+ QLFY    +AE +YL LKQ  P D D+  +L KI  +K +P+F
Sbjct:  597 QENQIQDVRIVTLLGWSYAGNKQYQRAMDEFKKASLLPNAKQHRSTIQRGYQYAQHMSALKNESEKSETENRPEKNLQIAENYWKLARYEQAMKNVQKVLASPAATEQVRDTARILAARLYLRDGQSAQALSELKKIKDSENKTSSTLVSLIQQEQYLNEYFAGQGKSQEFQNQRLESGIRESLLKLVAIYESEGVPGKALRLLERAHELDPNDSEIRKQLAKFQLFYQQFSQAEENYLILKQEFPEDQDIQDSLSKIEQIKVLPRF 863          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A517WE66_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WE66_9PLAN)

HSP 1 Score: 179 bits (454), Expect = 7.430e-48
Identity = 105/264 (39.77%), Postives = 162/264 (61.36%), Query Frame = 1
Query:   13 VKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKML--------AELKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHAL--TPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            ++Q+G +QD    + LGW+Y+G RQ+ QAL EFT+A++ PG    RG++   +KL  ++      N  ++  E P   L++    W+L  + KA+++A KVL+S+ A     D+A + LAR  LI G  EQA  +L Q+QD +N+  Q+L +RL+LEK++        A  K      +LKLA LY+ +G+PGKAL LL +AH    +  + QIL+ LA LQLFY LL EAE+SYL L++ SP D ++  AL++I   ++ P++
Sbjct:  594 LEQVG-IQDARFMSMLGWSYLGKRQYDQALEEFTRATRTPGQKMIRGNLNDGIKLALKRRKAAEENRGESQHEKPGSYLKLTNNMWQLVMFDKAEKFAHKVLDSKQATTAELDQAHVWLARLALIQGDSEQALQELNQVQDADNEAAQALRQRLDLEKIITSAWASESASSKVPDSSQILKLAKLYEEQGVPGKALKLLKQAHDRNDSDSDTQILRELARLQLFYSLLDEAESSYLSLQKTSPDDPEIQKALQQITRFRETPRY 856          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A813BN06_SYMMI (InfB protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813BN06_SYMMI)

HSP 1 Score: 177 bits (450), Expect = 4.720e-47
Identity = 105/263 (39.92%), Postives = 161/263 (61.22%), Query Frame = 1
Query:   13 VKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKML--------AELKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHAL--TPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQ 771
            ++Q+G +QD    + LGW+Y+G RQ+ QAL EFT+A++ PG    RG++   +KL  ++      N  ++  E P   L++    W+L  + KA+++A KVL+S+ A     D+A + LAR  LI G  EQA  +L Q+QD +N+  Q+L +RL+LEK++        A  K      +LKLA LY+ +G+PGKAL LL +AH    +  + QIL+ LA LQLFY LL EAE+SYL L++ SP D ++  AL++I   ++ P+
Sbjct: 1563 LEQVG-IQDARFMSMLGWSYLGKRQYDQALEEFTRATRTPGQKMIRGNLNDGIKLALKRRKAAEENQGESQHEKPGSYLKLTNNMWQLVMFDKAEKFAHKVLDSKQATTAELDQAHVWLARLALIQGDSEQALQELNQVQDADNEAAQALRQRLDLEKIITSAWASESASSKVPDSSQILKLAKLYEEQGVPGKALKLLKQAHDRNDSDSDTQILRELARLQLFYSLLDEAESSYLSLQKTSPDDPEIQKALQQITRFRETPR 1824          
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Match: A0A518A7T2_9PLAN (Uncharacterized protein n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A7T2_9PLAN)

HSP 1 Score: 170 bits (431), Expect = 1.040e-44
Identity = 105/262 (40.08%), Postives = 157/262 (59.92%), Query Frame = 1
Query:   19 QLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQRGSIQRDLKLCEQQLSNKAANTKQNSV--ETPQRNLQIAQAFWKLTFYRKAQRYAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKEYQSLSERLELEKMLA-ELKPDQQ-------EAVLKLASLYQSEGIPGKALTLLSKAHALTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIADLKQVPQF 774
            +L  + D      LGWAY+G  ++ +AL EF +AS+ PG    R ++   +KL  ++   KA    Q  V  E P+  L+IA   WKL  + K   YA+KVL+S+ +     D+A + LAR  LI+G+ +QA  +L  ++D  N+  Q++ ER++LEK +A  L  D         E +LKLA+LY+ +G+PGKAL LL +AHA  P ++ IL+ LA LQLFYHLL  AE SY  L+  SP + D+ AAL+KI+  ++ P++
Sbjct:  595 ELQGMNDARFMGTLGWAYLGKHEYDRALEEFARASRTPGQKQIRSTLASGIKLALKRQ--KAVQESQGKVQFEKPESYLKIAANMWKLEMFDKTDLYARKVLDSKLSTPAERDEAHVWLARLALIHGKTDQAVQELNAVKDSNNEAAQNILERIKLEKNIAASLASDSDSQSSKLSEPILKLAALYEDQGVPGKALRLLQQAHARLPADQPILKELARLQLFYHLLDAAEESYRSLQAASPENQDIQAALEKISKYRETPRY 854          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84414.19683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2E7KDZ3_9PLAN1.570e-16599.61Uncharacterized protein n=6 Tax=Gimesia TaxID=1649... [more]
A0A518ACP0_9PLAN1.780e-10569.26Uncharacterized protein n=4 Tax=Gimesia panareensi... [more]
A0A517WSD4_9PLAN3.050e-6446.59Tetratricopeptide repeat protein n=2 Tax=Gimesia a... [more]
A0A517RLA8_9PLAN4.930e-5943.38Tetratricopeptide repeat protein n=2 Tax=Gimesia a... [more]
A6BYN2_9PLAN1.970e-5140.51Uncharacterized protein n=8 Tax=Planctomycetaceae ... [more]
A0A517VFE1_9PLAN9.710e-5140.51Uncharacterized protein n=2 Tax=Gimesia algae TaxI... [more]
A0A355G887_9PLAN1.850e-5040.45Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A0A517WE66_9PLAN7.430e-4839.77Uncharacterized protein n=6 Tax=Gimesia TaxID=1649... [more]
A0A813BN06_SYMMI4.720e-4739.92InfB protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A518A7T2_9PLAN1.040e-4440.08Uncharacterized protein n=4 Tax=Gimesia panareensi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84414contigM-pyrifera_M_contig84414:102..878 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score191.4
Seed ortholog evalue5.2e-46
Seed eggNOG ortholog344747.PM8797T_27654
Hectar predicted targeting categoryother localisation
EggNOG OGs28PN7@1,2J230@203682,2ZCB2@2
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size777
Cds size777
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816751.45029-CDS-M-pyrifera_M_contig84414:101..8781622816751.45029-CDS-M-pyrifera_M_contig84414:101..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84414 102..878 -
1692278156.8987308-CDS-M-pyrifera_M_contig84414:101..8781692278156.8987308-CDS-M-pyrifera_M_contig84414:101..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84414 102..878 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84414.19683.1prot_M-pyrifera_M_contig84414.19683.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84414 102..878 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84414.19683.1

>prot_M-pyrifera_M_contig84414.19683.1 ID=prot_M-pyrifera_M_contig84414.19683.1|Name=mRNA_M-pyrifera_M_contig84414.19683.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=259bp
GIEFVKQLGTVQDVHLTNYLGWAYVGNRQFQQALTEFTKASQMPGHVAQR
GSIQRDLKLCEQQLSNKAANTKQNSVETPQRNLQIAQAFWKLTFYRKAQR
YAQKVLESQNADEQTSDKARLILARFDLINGQPEQATAQLKQIQDHENKE
YQSLSERLELEKMLAELKPDQQEAVLKLASLYQSEGIPGKALTLLSKAHA
LTPDNRQILQRLAELQLFYHLLPEAEASYLKLKQFSPADGDVNAALKKIA
DLKQVPQF*
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mRNA from alignment at M-pyrifera_M_contig84414:102..878-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84414.19683.1 ID=mRNA_M-pyrifera_M_contig84414.19683.1|Name=mRNA_M-pyrifera_M_contig84414.19683.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=777bp|location=Sequence derived from alignment at M-pyrifera_M_contig84414:102..878- (Macrocystis pyrifera P11B4 male)
GGCATTGAATTTGTGAAGCAACTGGGAACCGTTCAGGACGTTCACCTGAC GAACTATCTGGGCTGGGCCTATGTAGGGAATCGTCAGTTCCAGCAGGCGC TGACAGAATTCACCAAAGCCAGCCAGATGCCAGGCCACGTCGCACAACGC GGTAGTATTCAGCGCGACTTAAAACTCTGTGAACAACAACTGTCGAATAA AGCCGCGAATACAAAACAAAATTCAGTGGAGACTCCCCAGCGAAATCTGC AGATCGCCCAGGCATTCTGGAAGCTGACATTTTATCGAAAAGCGCAGCGG TACGCCCAAAAAGTGCTTGAGTCTCAGAACGCCGATGAGCAAACGAGTGA CAAGGCACGACTTATTCTGGCACGGTTTGACCTGATCAACGGACAACCAG AGCAGGCTACCGCACAACTCAAACAGATTCAGGATCACGAGAACAAGGAA TACCAGAGCTTATCCGAGCGACTTGAGTTGGAGAAGATGCTGGCCGAACT GAAACCAGATCAGCAAGAAGCGGTTTTGAAACTGGCTTCGCTTTACCAGT CAGAGGGAATTCCCGGTAAAGCGCTCACTCTCCTGAGCAAAGCCCACGCG TTGACACCCGATAATCGACAGATTCTTCAACGCCTGGCGGAACTGCAGTT GTTTTATCATCTGCTCCCCGAAGCGGAAGCCAGTTATCTGAAACTGAAAC AGTTTTCCCCTGCGGATGGCGATGTGAACGCGGCTTTGAAAAAGATCGCC GATTTGAAGCAGGTTCCACAGTTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84414:102..878-

>mRNA_M-pyrifera_M_contig84414.19683.1 ID=mRNA_M-pyrifera_M_contig84414.19683.1|Name=mRNA_M-pyrifera_M_contig84414.19683.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1554bp|location=Sequence derived from alignment at M-pyrifera_M_contig84414:102..878- (Macrocystis pyrifera P11B4 male)
GGCATTGAATTTGTGAAGCAACTGGGAACCGTTCAGGACGTTCACCTGAC
GAACTATCTGGGCTGGGCCTATGTAGGGAATCGTCAGTTCCAGCAGGCGC
TGACAGAATTCACCAAAGCCAGCCAGATGCCAGGCCACGTCGCACAACGC
GGTAGTATTCAGCGCGACTTAAAACTCTGTGAACAACAACTGTCGAATAA
AGCCGCGAATACAAAACAAAATTCAGTGGAGACTCCCCAGCGAAATCTGC
AGATCGCCCAGGCATTCTGGAAGCTGACATTTTATCGAAAAGCGCAGCGG
TACGCCCAAAAAGTGCTTGAGTCTCAGAACGCCGATGAGCAAACGAGTGA
CAAGGCACGACTTATTCTGGCACGGTTTGACCTGATCAACGGACAACCAG
AGCAGGCTACCGCACAACTCAAACAGATTCAGGATCACGAGAACAAGGAA
TACCAGAGCTTATCCGAGCGACTTGAGTTGGAGAAGATGCTGGCCGAACT
GAAACCAGATCAGCAAGAAGCGGTTTTGAAACTGGCTTCGCTTTACCAGT
CAGAGGGAATTCCCGGTAAAGCGCTCACTCTCCTGAGCAAAGCCCACGCG
TTGACACCCGATAATCGACAGATTCTTCAACGCCTGGCGGAACTGCAGTT
GTTTTATCATCTGCTCCCCGAAGCGGAAGCCAGTTATCTGAAACTGAAAC
AGTTTTCCCCTGCGGATGGCGATGTGAACGCGGCTTTGAAAAAGATCGCC
GATTTGAAGCAGGTTCCACAGTTCTGAGGCATTGAATTTGTGAAGCAACT
GGGAACCGTTCAGGACGTTCACCTGACGAACTATCTGGGCTGGGCCTATG
TAGGGAATCGTCAGTTCCAGCAGGCGCTGACAGAATTCACCAAAGCCAGC
CAGATGCCAGGCCACGTCGCACAACGCGGTAGTATTCAGCGCGACTTAAA
ACTCTGTGAACAACAACTGTCGAATAAAGCCGCGAATACAAAACAAAATT
CAGTGGAGACTCCCCAGCGAAATCTGCAGATCGCCCAGGCATTCTGGAAG
CTGACATTTTATCGAAAAGCGCAGCGGTACGCCCAAAAAGTGCTTGAGTC
TCAGAACGCCGATGAGCAAACGAGTGACAAGGCACGACTTATTCTGGCAC
GGTTTGACCTGATCAACGGACAACCAGAGCAGGCTACCGCACAACTCAAA
CAGATTCAGGATCACGAGAACAAGGAATACCAGAGCTTATCCGAGCGACT
TGAGTTGGAGAAGATGCTGGCCGAACTGAAACCAGATCAGCAAGAAGCGG
TTTTGAAACTGGCTTCGCTTTACCAGTCAGAGGGAATTCCCGGTAAAGCG
CTCACTCTCCTGAGCAAAGCCCACGCGTTGACACCCGATAATCGACAGAT
TCTTCAACGCCTGGCGGAACTGCAGTTGTTTTATCATCTGCTCCCCGAAG
CGGAAGCCAGTTATCTGAAACTGAAACAGTTTTCCCCTGCGGATGGCGAT
GTGAACGCGGCTTTGAAAAAGATCGCCGATTTGAAGCAGGTTCCACAGTT
CTGA
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