mRNA_M-pyrifera_M_contig84405.19680.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A6N9ENH8_9ACTN (DNA helicase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9ENH8_9ACTN) HSP 1 Score: 213 bits (541), Expect = 3.670e-61 Identity = 123/277 (44.40%), Postives = 171/277 (61.73%), Query Frame = 1 Query: 4 GFGSPEKLLLKDDFTPETLRTQIGKLAQGGGR--LSASDETEVRGRLYPELVIVDRSKPSDGKLMFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGIRVSGRGNEKFREQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFLQPGADHFVIALDAAQSIYRRQSRWTPEGVTGRGRTKLLRLNYRNTREILEAAYNFL 828 GF + LL +DF E L + ++A GG R L +E+ R + P +VI + + G+L F P S + E L LDR QERLA +G GYR+I+GVAGSGK+LV+T+RAR +A +FP L+ C+N+ L+ +L Q+A+Y +RV T+D +A V G G F ++ AA++ + + +KL D VLVDEAQDLD+ G LA + L+PG DHFV+ALD AQ IYRR+ W P G+T RGRT +L +NYRNTR+IL+ L Sbjct: 148 GFRADVPLLCAEDFAIEALGPALQEIA-GGRRAHLPQEEESAARAAVNPGIVI----RGTQGQL-FAPQSKSDDEILRTLDRKQERLAHSLGPGYRLIRGVAGSGKTLVLTYRARHMARHFPRWRILLLCFNKALSLALSHQVAEYDGVRVHTLDALALRVLAAAGRAPDGEDKPDFDRRRRAAIQAVTAVDHSKLF-DMVLVDEAQDLDEAGLNLAWAMLKPGRDHFVMALDGAQMIYRRRMTWNPPGMTARGRTTILNVNYRNTRQILDLGRELL 417
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A6B1G602_9ACTN (DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1G602_9ACTN) HSP 1 Score: 207 bits (526), Expect = 8.740e-59 Identity = 123/281 (43.77%), Postives = 165/281 (58.72%), Query Frame = 1 Query: 25 LLLKDDFTPETLRTQIGKLAQGGGR---LSASDETEVRGRLYPELVIVDRSKPSDGKLMFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGIRVSGRGNEKF---REQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFLQPGADHFVIALDAAQSIYRRQSRWTPEGVTGRGRTKLLRLNYRNTREILEAAYNFLAAGTVAE 849 LL +DDF LR + GGR L +++++ R + PE+VI R+ MF P E + LDR+QER ARH+G GYRVI+GVAGSGK+LV+T RAR++A NFP L+ C+NR LA +L+ Q+AD N+ V ++D++A V + + F R++ A LR + + D VLVDEAQDL G +LA L+PG DHFVIALD AQ IYR RW P G+T +GRTK+ +NYRNT +ILE A LA G + Sbjct: 167 LLTRDDFESPALRLALQSAI--GGRILPLGTAEQSQTRAVIKPEIVISGRAP-----AMFREPDPAGEEIIRTLDREQERTARHLGPGYRVIRGVAGSGKTLVLTHRARYIARNFPDWRILLMCFNRPLASALRAQVADCANVYVRSIDQLAHRVLSQADLVGDSEAKPDFEQRRQEATAHLRGLTDAQRRERGYDLVLVDEAQDLGADGLDLAWQSLKPGRDHFVIALDGAQRIYRGGRRWNPPGMTAQGRTKVFDVNYRNTDKILEEA--LLALGDAGQ 438
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A6G2JUK3_9ACTN (DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6G2JUK3_9ACTN) HSP 1 Score: 207 bits (527), Expect = 4.450e-58 Identity = 125/280 (44.64%), Postives = 167/280 (59.64%), Query Frame = 1 Query: 25 LLLKDDFTPETLRTQIGKLAQGGG--RLSASDETEVRGRLYPELVIVDRSKPSDGKLMFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGIRVSGRGNEKF---REQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFLQPGADHFVIALDAAQSIYRRQSRWTPEGVTGRGRTKLLRLNYRNTREILEAAYNFLAAGTVAE 849 LL +DDF PE LR + + A GG L ++ +++ R + PE+VI R+ MF P + E + LDR+QER ARH+G GYRVI+GVAGSGK+LV+T RAR +A+NF L+ C+NR LA +L+ Q+AD N+ V ++D++A V G+ F R + A LR + + D VLVDEAQDL G +LA L+PG DHFVIALD AQ IYR RW P G+T +GRTK+ +NYRNT +ILE A LA G + Sbjct: 300 LLTRDDFEPEALRLAL-QSAIGGQILPLGSAQQSQTRAVIKPEIVISGRTP-----AMFREPDSAGEEIIRTLDREQERTARHLGPGYRVIRGVAGSGKTLVLTHRARHIAQNFGDWRILLMCFNRPLASALRAQVADCANVWVRSIDQLARRVLELAGLVGDSNAKPDFEQRRREATAHLRGLTDAQRHERGYDLVLVDEAQDLGADGLDLAWESLKPGRDHFVIALDGAQRIYRGGRRWNPPGMTAQGRTKVFDVNYRNTDKILEEA--LLALGDAGQ 571
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A7K2B2T0_9ACTN (DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2B2T0_9ACTN) HSP 1 Score: 198 bits (504), Expect = 9.620e-56 Identity = 115/280 (41.07%), Postives = 160/280 (57.14%), Query Frame = 1 Query: 10 GSPEKLLLKDDFTPETLRTQI-GKLAQGGGRLSASDETEVRGRLYPELVI--VDRSKPSDGKLMFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGIRVSGRGNEKFREQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFLQPGADHFVIALDAAQSIYRRQSRWTPEGVTGRGRTKLLRLNYRNTREILEAAYNFLAAGT 840 P ++L ++DFT + L + G + L DET+ R + PE++I S + +F PP T + + LDR QERLARH+G GYR+I+GVAGSGK+L++T RA+ ++FP L+ C+NR L+ +L ++ N+ TVD +A+ + G N F +++ AL V K D VLVDEAQDL + G ELA + L+P DHFVIALD+AQ +YRR+ W P T RGR +LR NYRNTREIL+ A L T Sbjct: 146 SEPLRMLTEEDFTRDGLEQALHGHMGTRSSSLDPVDETKARATVKPEIIIGGSPESTRAAQAPLFGPPDDT--DQVRALDRRQERLARHLGGGYRLIRGVAGSGKTLILTHRAKHFGKHFPDWRILLLCFNRALSVALTAEMKRVDNVHTKTVDGLAAALLKDAGRPAPFERNPDFEARRSDALEVANRLDAGKRF-DMVLVDEAQDLGESGLELAWAMLKPDRDHFVIALDSAQKVYRRRMTWNPPSTTARGRATVLRTNYRNTREILDPALAILRLST 422
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A6N9A033_9ACTN (DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N9A033_9ACTN) HSP 1 Score: 179 bits (453), Expect = 2.790e-48 Identity = 115/301 (38.21%), Postives = 166/301 (55.15%), Query Frame = 1 Query: 4 GFGSPEKLLLKDDFT----PETLRTQIGKLAQGGGRLSASDETEVRGRLYPELVIVDRSKPSDGKL-----MFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGIRVSGRGNEKFREQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFLQP---------------GADHFVIALDAAQSIYRRQSR-WTPEGVTGRGRTKLLRLNYRNTREILEAAYNFLA 831 G G+ LLL+ D P +R G +G L+ ++ VR + P +VI + + S+ + +F P + + V+DR QERLA H+G GYR+++GVAGSGK+LV+T RARFL E FP+ LV CYNRVLA+ L+ + +V +D +A E+ K + SG F + A+ P ++ D VLVDEAQD D G LA+ L+ GA H V+ALD+AQ++Y+R+S W P +T +GRT++ R NYRNTR+IL+ A+ FLA Sbjct: 132 GLGNGVDLLLRSDLADRGLPLAMRRIFGLRREGS--LNDREQQLVRAAINPRVVINLKLEGSEAEQAVKIPLFHEPEIAPEDIIRVMDRKQERLAEHMGWGYRMLRGVAGSGKTLVLTHRARFLRERFPNYRILVLCYNRVLANGLRGMIGKSNGTKVIHIDSLAFELAGK---KPSGNTFPDFPRLRLKAIEAAERLPDSRRY-DVVLVDEAQDFDHGGLGLAYHMLKKNRRNLSASQQDLTSAGAGHLVLALDSAQNLYQRRSMTWNPPNITAQGRTEIFRSNYRNTRQILDLAWKFLA 426
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A6B0ZBE9_9ACTN (DNA helicase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZBE9_9ACTN) HSP 1 Score: 173 bits (439), Expect = 2.630e-46 Identity = 112/289 (38.75%), Postives = 160/289 (55.36%), Query Frame = 1 Query: 25 LLLKDDFTPETLRTQIGKLA--QGGGRLSASDETEVRGRLYPELVIVDRSKPSDGKLMFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGIRVSGRGNEKFREQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFLQPGA----------DHFVIALDAAQSIYRRQ-SRWTPEGV-------TGRGRTKLLRLNYRNTREILEAAYNFLA 831 +L + DF +L + ++ + L+ +E R + PE+V+ S+ +F P S + + V+DR+QER+A H+GDGYRV++GVAGSGK+LV+ RAR+L +++P LV CYNRVLA +L + + V VD +A + ++G R G F A + + P ++ D VLVDEAQDLD LA+S L+P D+FV+A D AQ++Y R +RW P GV T RGRT + R NYRNTREILE A +FLA Sbjct: 138 ILRRSDFAEGSLEGALRRILGDEQTRPLNEREEKRARAVVNPEIVLPQSG--SESLPLFQDPEIPSEDVIRVMDREQERVAEHLGDGYRVLRGVAGSGKTLVLAHRARYLHKHWPTLRILVLCYNRVLAHALSTMVTPGDRLEVTNVDRLAYHLAGRDGHR----GPPDFEALVLKAEKQAKRLPDSERY-DVVLVDEAQDLDFPRLNLAYSMLKPDRLKPDLARPDRDNFVMAYDVAQNVYSRGGARWNPPGVDAQGRPRTARGRTTVFRRNYRNTREILEFAMHFLA 419
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A6L7XCG1_9ACTN (DNA helicase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XCG1_9ACTN) HSP 1 Score: 171 bits (433), Expect = 1.960e-45 Identity = 117/292 (40.07%), Postives = 158/292 (54.11%), Query Frame = 1 Query: 25 LLLKDDFTPETLRTQIGKLAQGGGR---LSASDETEVRGRLYPELVIVDRSKPSDGKL-MFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVC-WKEGIRVSGRGNEKFREQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFL----------QPGADHFVIALDAAQSIYRRQ-SRWTPEGV-------TGRGRTKLLRLNYRNTREILEAAYNFLA 831 +L + D + + L + ++ GG R LS +E R + PE+++ +P L +F P + + V+DR QER+A H+GDGYRV++GVAGSGK+LV+ RAR L FP LV CYNRVLA++L+ + + V +D +A + W S RG F A + R P ++ DAVLVDEAQD D LA+S L Q D FV+A D AQ++YRR +RW P GV T RGR+ + R NYRNTREILE A NFLA Sbjct: 139 ILTRSDLSRDQLEGALRRVL-GGVRIQPLSEREEKRARAVVNPEIIL---PQPQSETLPLFQDPETRPEDVIRVMDRHQERVAEHLGDGYRVLRGVAGSGKTLVLAHRARHLHRTFPKWRILVVCYNRVLANALEAMVDPDERLEVTNIDRLAYRLAGWS-----SRRGKPDFDSLVLEAEKKARRLPDSERF-DAVLVDEAQDFDHPRLTLAYSMLKSDRLRPDPVQLDRDSFVMAYDVAQNVYRRGGARWNPPGVDAQGRSRTARGRSTVFRKNYRNTREILEFAMNFLA 420
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A1F7LVK1_9BACT (DNA helicase n=1 Tax=Candidatus Rokubacteria bacterium GWC2_70_16 TaxID=1802097 RepID=A0A1F7LVK1_9BACT) HSP 1 Score: 142 bits (357), Expect = 8.750e-35 Identity = 101/284 (35.56%), Postives = 145/284 (51.06%), Query Frame = 1 Query: 16 PEKLLLKDDFTPETLRTQIGKLAQGGGR----LSASDETEVRGRLYPELVIVDRSKPSDGKLMFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGI---RVSGRGNEK----FREQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFLQPGADHFVIALDAAQSIYRRQSRWTPEGV--TGRGRTKLLRLNYRNTREILEAAYNFL 828 P +++ DD + L ++ +L + L ++ E+R L+PE+ I G D ++ L V+DR+QERLAR +GD +R+++GVAGSGK++ + RAR+L LV C+NRVLADSL+ + P I VAT G+ R +GRG E R L + + A+LVDE QD D + L P + IALD++Q+IYRR+ W GV GR RT++LR+NYRNTR IL AAY + Sbjct: 155 PGRVMTADDLAQKALLPRLKELLPDWSKRLPPLDPAEVDEIRAVLHPEVRI--------GWGYSD------ADILCVMDREQERLARSLGDDHRLLRGVAGSGKTITLICRARYLRVAHAEWRVLVLCFNRVLADSLRDAIGGDPGIEVATFHGWCHAQLQHAGLPPPRPAGRGQEWDEYFVRVVPGFLLSAYDDGRLPQGTYQAILVDEGQDFADDWYRVLLRALDPTTNSLFIALDSSQNIYRRKVSWREIGVQIVGRTRTRVLRVNYRNTRAILSAAYRLI 424
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A7X7DTZ3_9BACT (DNA helicase n=1 Tax=Synergistaceae bacterium TaxID=2053624 RepID=A0A7X7DTZ3_9BACT) HSP 1 Score: 137 bits (345), Expect = 4.960e-33 Identity = 98/254 (38.58%), Postives = 131/254 (51.57%), Query Frame = 1 Query: 91 GGRLSASDETEVRGRLYPELVIVDRSKPSDGKLMFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGIRVSGRGNEKFREQQAAALRVMRSRPIAKLLVDAVLVDEAQDLDDVGTELAHSFL-QPGADHFVIALDAAQSIYR-RQSRWTPEGVTGRGRTKLLRLNYRNTREILEAAYNFLAAGTVA 846 GG L+ S +R ++PE++I F+ TS+ L VLD DQER AR+I G+R+I GVAGSGK+++ RA+ LA+ P+ L+ CYN+ LA LK L +YP+I V +A + W G S NE F E+ L+ + + DA+LVDEAQD D S L P +I D QS+Y+ R+ W GV GRTK LR NYRN+REI A F G A Sbjct: 191 GGGLTPSQVDALRATIHPEVIIE----------KFET-VRTSNIELKVLDLDQEREARNIASGHRLIWGVAGSGKTVLAISRAKLLAQENPNARILMTCYNKTLAAYLKKTLENYPSIEVMHFHSLAKRI-WNCGFS-SKESNEVFGER---LLKCLSKGAVVNTKYDAILVDEAQDFDPAWFRCLLSLLCDPDDGDLLIVGDGMQSLYKSRKITWKSLGVQAGGRTKYLRRNYRNSREIASLAAAFSVFGNTA 428
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Match: A0A2V6Y5B5_9BACT (DNA helicase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6Y5B5_9BACT) HSP 1 Score: 136 bits (343), Expect = 7.520e-33 Identity = 95/282 (33.69%), Postives = 147/282 (52.13%), Query Frame = 1 Query: 16 PEKLLLKDDFTPETLRTQIGKLAQGGG----RLSASDETEVRGRLYPELVIVDRSKPSDGKLMFDPPSATSSEALAVLDRDQERLARHIGDGYRVIKGVAGSGKSLVITFRARFLAENFPHKNYLVACYNRVLADSLKIQLADYPNIRVATVDEVASEVCWKEGIRVS-----GRGNEKFREQQAAALRVMRSRPIAKL-LVDAVLVDEAQDLDDVGTELAHSFLQPGADHFVIALDAAQSIYRRQSRWTPEGVTGRGRTKLLRLNYRNTREILEAAYNFLA 831 P +L DD T E L ++ +L G RLS + E+R LYPE+ + G D ++ L V+DR+QE LA+ +GDG+R+++GVAGSGK++V+ RAR L E P LV C+NRVLA+ L + ++ T S + + + G+ ++ E+ A L + A+ A+LVDE QD + + L P ++ +A+D++Q+IY+R+ W GV G T++LR+NYRNTR IL AAY ++ Sbjct: 155 PGLVLTADDLTAERLLPRLRRLVPGWAAHAPRLSPAQVDEIRAVLYPEIRV--------GWAYDD------AQLLEVMDREQECLAKSMGDGHRLVRGVAGSGKTIVLACRARHLRELHPDWRILVLCFNRVLAEHLAGTVGADDRLQALTFHAWCSRELRRAKVAMPPAPERGQAWHEYWERVPALLLDAYATGQARTGTYQAILVDEGQDFANDWYRVILKALDPASNSLFVAVDSSQNIYQRKISWRELGVQIVGHTRVLRVNYRNTRPILNAAYRVIS 422 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84405.19680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84405.19680.1 >prot_M-pyrifera_M_contig84405.19680.1 ID=prot_M-pyrifera_M_contig84405.19680.1|Name=mRNA_M-pyrifera_M_contig84405.19680.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp MGFGSPEKLLLKDDFTPETLRTQIGKLAQGGGRLSASDETEVRGRLYPELback to top mRNA from alignment at M-pyrifera_M_contig84405:6..863- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84405.19680.1 ID=mRNA_M-pyrifera_M_contig84405.19680.1|Name=mRNA_M-pyrifera_M_contig84405.19680.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig84405:6..863- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84405:6..863- >mRNA_M-pyrifera_M_contig84405.19680.1 ID=mRNA_M-pyrifera_M_contig84405.19680.1|Name=mRNA_M-pyrifera_M_contig84405.19680.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig84405:6..863- (Macrocystis pyrifera P11B4 male)back to top |