mRNA_M-pyrifera_M_contig84374.19678.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84374.19678.1
Unique NamemRNA_M-pyrifera_M_contig84374.19678.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A5A8CA14_CAFRO (Serine hydroxymethyltransferase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CA14_CAFRO)

HSP 1 Score: 355 bits (910), Expect = 3.420e-117
Identity = 186/291 (63.92%), Postives = 219/291 (75.26%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQ--GFGGKKVATWKKTLIQETPQEIADLRAKVADFAASFPVVGFDAQTMKYK 867
            +RLIDY+RMR  AD+HDAYLV+DMAH+SGLVAAG IPSPFE  DVVTTTTHKSLRGPRGAMIFYRKGVR V K G E ++D+   I+FSVFPGLQGGPHNHTI+ALATALKQV  PSFV YQ+ V+EN++ LA SL    ++LVSGGTD HL+LVDLR+          +DGARAE VLEL+GI+TNKNTVPGD SALVPGGIR+GTPALTSRGL  ADF+ V  F   AI I +++  +    G KKVA +   L+   P E+  L   V DFA +FP +GFD   MKY+
Sbjct:  217 SRLIDYDRMRATADKHDAYLVADMAHVSGLVAAGQIPSPFEQCDVVTTTTHKSLRGPRGAMIFYRKGVRSVSKKGKETMYDLEGPINFSVFPGLQGGPHNHTISALATALKQVKDPSFVDYQRKVMENSAALAKSLTDAAFDLVSGGTDNHLVLVDLRAKG--------IDGARAERVLELAGIITNKNTVPGDVSALVPGGIRMGTPALTSRGLVEADFDAVTGFFSRAIEITQSVNEKLKADGKKKVADFNAELLANPPAELEALARDVKDFARTFPSIGFDESAMKYR 499          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A7S2C4R3_9STRA (Serine hydroxymethyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4R3_9STRA)

HSP 1 Score: 342 bits (878), Expect = 4.540e-113
Identity = 177/293 (60.41%), Postives = 218/293 (74.40%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQETPQ--EIADLRAKVADFAASFPVVGFDAQTMKYKHE 873
            +RLIDYERMRK+AD+H A+L+SDMAHISGLV+AG IPSPF++SD+VTTTTHKSLRGPRGAMIFYRKGVR V K G E ++D+  KI+F+VFPGLQGGPHNHTIAALATALKQ  +P + +YQQ V+ N++  A SL +KGYELVSGGTD HL+LVDL+ S         +DGAR E VLE   + TNKNTVPGD SA+ P GIR+GTPALT+RG   ADF++VA+F    +TI + L+     GKK+  +K  L        EI  LRA VA FA +FP +GFD  +MK+  +
Sbjct:  163 SRLIDYERMRKIADQHGAWLLSDMAHISGLVSAGCIPSPFDYSDIVTTTTHKSLRGPRGAMIFYRKGVRSVTKKGVEIMYDLEDKINFAVFPGLQGGPHNHTIAALATALKQATTPEYKEYQQQVMSNSAQFAKSLQAKGYELVSGGTDNHLVLVDLKKSRG-------IDGARVERVLECVNMATNKNTVPGDVSAMTPSGIRMGTPALTTRGFTEADFDKVAEFFDRGVTISQMLKEST--GKKLKDFKAALAPGAAPVPEIEALRADVAAFARTFPTIGFDESSMKFPED 446          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A7S2WJP7_9STRA (Serine hydroxymethyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJP7_9STRA)

HSP 1 Score: 339 bits (869), Expect = 4.820e-111
Identity = 174/293 (59.39%), Postives = 216/293 (73.72%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQ--ETPQEIADLRAKVADFAASFPVVGFDAQTMKYKHE 873
            +RL+DYER+R + D+H+AY++SDMAH+SGLVAAG IPSPFEHSD+VTTTTHKSLRGPRGAMIFYRKGVR V K G E ++++  KI+F+VFPGLQGGPHNHTI ALATALKQ  S  F  YQ  V+ N+S LAS+L  +GY LVSGGTD HL+LVDL++S         +DGAR E VLEL+ I TNKNTVPGD SA+ PGGIR+G PALTSRGLG ADFE+VA+F    ++I   L+ +   GKK+  ++  L        E+  LR  V DF+  FP VGFD  +M++  +
Sbjct:  210 SRLVDYERIRAICDQHNAYMLSDMAHVSGLVAAGCIPSPFEHSDIVTTTTHKSLRGPRGAMIFYRKGVRSVNKKGVETMYNLEDKINFAVFPGLQGGPHNHTICALATALKQAQSQEFKDYQGQVMSNSSALASALTKRGYSLVSGGTDNHLVLVDLKASRG-------IDGARVERVLELANIATNKNTVPGDVSAMTPGGIRMGAPALTSRGLGEADFERVAEFFDRGVSI--ALQVKESTGKKLKDFRAALQPGASAVPELEALRQDVIDFSQQFPTVGFDESSMRFPED 493          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: W7TN09_9STRA (Serine hydroxymethyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN09_9STRA)

HSP 1 Score: 335 bits (858), Expect = 1.950e-109
Identity = 176/284 (61.97%), Postives = 210/284 (73.94%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQETP---QEIADLRAKVADFAASFPVVGF 843
            AR IDYERMRK+AD+H+AYL+SDMAHISGLVAAG IPSPF HSD+VTTTTHKSLRGPRGAMIFYRKGVRRV K G E  +D+  KI+F+VFPGLQGGPHNHTIAALATALKQ  SP F +YQ+ V++N+  LA +L   GY LVSGGTD HL+LVDL+  +        +DGAR E V+EL+ +  NKNTVPGDKSAL PGGIR+G PALTSRG    DFEQV  F   A+ I + ++ +   G K+  +K+ L +E P   Q + DL+  V  FA  FP VGF
Sbjct:  221 ARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGAIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRRVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQAASPEFKKYQEQVLQNSKRLAETLTKAGYSLVSGGTDNHLVLVDLKPQQ--------VDGARVERVMELANMAANKNTVPGDKSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRAVKIAQEIKRET--GPKIKDFKEAL-REGPGKHQALVDLKKDVVAFAQKFPTVGF 493          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A5J4XZN4_9CHLO (Serine hydroxymethyltransferase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XZN4_9CHLO)

HSP 1 Score: 332 bits (852), Expect = 5.390e-108
Identity = 172/288 (59.72%), Postives = 209/288 (72.57%), Query Frame = 1
Query:    4 RLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQETPQEIADLRAKVADFAASFPVVGFDAQTMKYK 867
            R  DY RMR++AD+H+A+L+SDMAHISGLVAAGV+PSPF+HSDVVTTTTHKSLRGPRGAMIFYRKGVR+V K G E ++DI  KIDFSVFPGLQGGPHNHTI+ LA ALKQ  SP F  YQ+ V+ N+  +A   A   Y+LVSGGT+ HLLL+DLR           +DG+R E VLE++ I TNKNTVPGD SAL+PGG+R+G PALTSRG    DF QVADFV   + I + L+ +   G K+  +K  L    P EIA+L+  V  FA  FP +GF+   M+YK
Sbjct:  257 RHYDYPRMRQIADKHNAWLLSDMAHISGLVAAGVVPSPFDHSDVVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEVMYDIDKKIDFSVFPGLQGGPHNHTISGLACALKQAKSPEFKAYQEQVLLNSKAMADRFAELEYKLVSGGTENHLLLLDLRPKG--------VDGSRVERVLEMAHIATNKNTVPGDTSALMPGGLRMGAPALTSRGFIEDDFRQVADFVDRGVQITQDLKKKH--GPKLKDFKAYLETNVPPEIAELKDNVETFAKQFPTIGFEKAAMRYK 534          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A2D4BQ84_PYTIN (Serine hydroxymethyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ84_PYTIN)

HSP 1 Score: 331 bits (849), Expect = 6.530e-108
Identity = 169/293 (57.68%), Postives = 218/293 (74.40%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGF--GGKKVATWKKTLIQETP--QEIADLRAKVADFAASFPVVGFDAQTMKYK 867
            +R IDY RMR + D+H+A L++DMAHISGLVAAGV+PSPFE++DVVTTTTHKSLRGPRGAMIFYRKG++ V K G E  +D+  +IDFSVFPGLQGGPHNHTI+ALATAL+Q   PSFV YQQ V+ NA  +A+ L + GYE+VSGGT+ HL LV++++S         +DGAR E +LE + +V NKNT+PGDKSALVPGGIR+G PALT+RG    DF QVA F+ + + +  TL G+    GGKKV  +K+ + ++    + IA L+ +V++F   FP +GFD   MKYK
Sbjct:  220 SRHIDYARMRAICDQHNAILLADMAHISGLVAAGVVPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGLKNVDKKGNETHYDLQQRIDFSVFPGLQGGPHNHTISALATALRQAQQPSFVAYQQQVLRNAKAMANELMALGYEIVSGGTENHLALVNVKASRG-------VDGARVESLLENANMVVNKNTLPGDKSALVPGGIRVGAPALTTRGCTEEDFVQVARFLDQGVKLAATLNGECIAKGGKKVKDFKEFIHKDASAVERIAALQKEVSEFVRQFPTIGFDEADMKYK 505          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A7S3TWL3_EMIHU (Serine hydroxymethyltransferase n=4 Tax=Eukaryota TaxID=2759 RepID=A0A7S3TWL3_EMIHU)

HSP 1 Score: 331 bits (849), Expect = 9.570e-108
Identity = 170/289 (58.82%), Postives = 212/289 (73.36%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQETPQEIADLRAKVADFAASFPVVGFDAQTMKYK 867
            +R IDY RMR++ D+  A L++DMAHISGLVAA V+PSPF+++DVVTTTTHKSLRGPRGAMIFYRKGV+ V K G E  +++   I+ +VFPG QGGPHNHTIAALATALKQ  +P FV+YQQ V+ N++  A +++ +GY LVSGGTD HLLLVDL+ S         +DGAR E VLEL+ +  NKNTVPGDKSA +PGGIR+GTPALTSRG    DF  VA+F+H  + I + + G    G+K+A +K  L Q     + +LRA V  FA+ FPVVGFD  TMKYK
Sbjct:  239 SRHIDYARMRQICDKVGAVLLADMAHISGLVAAKVVPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKGVDKKGKEIAYELEGPINQAVFPGHQGGPHNHTIAALATALKQAAAPEFVEYQQQVLRNSARFADAMSERGYSLVSGGTDNHLLLVDLKPSG--------IDGARVESVLELANVALNKNTVPGDKSAFIPGGIRVGTPALTSRGFAEEDFAAVAEFIHRGVGIAKEINGADGVGRKLADFKAALKQREWPALRELRADVEAFASQFPVVGFDETTMKYK 519          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A7S0H645_9EUKA (Serine hydroxymethyltransferase n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H645_9EUKA)

HSP 1 Score: 330 bits (847), Expect = 1.700e-107
Identity = 171/289 (59.17%), Postives = 209/289 (72.32%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQETPQEIADLRAKVADFAASFPVVGFDAQTMKYK 867
            AR IDY RMR + D+  AYL++DMAHISGLVAAGV+P+PF+H+DV+TTTTHKSLRGPRGAMIF+RKGVR V K G +  +D+   I+ +VFPG QGGPHNHTI+ALATALKQ N+P FV YQ+ V+ N      ++  +GY LVSGGTD HLLLVDL+   AG      +DGAR E VLE + +  NKNTVPGDKSAL+PGGIR+GTPALTSRGL    F+QVA+F+H  + I + +      GKK+A +K  L  +    IA LRA V  FA  FP +GFD  TMKYK
Sbjct:  236 ARHIDYPRMRAICDKVGAYLMADMAHISGLVAAGVVPTPFDHADVITTTTHKSLRGPRGAMIFFRKGVRSVNKKGQDVPYDLEGPINQAVFPGHQGGPHNHTISALATALKQANTPEFVDYQKQVLVNNQAFGKAMVERGYALVSGGTDNHLLLVDLKP--AG------IDGARVEAVLERANVALNKNTVPGDKSALIPGGIRVGTPALTSRGLEEGHFDQVAEFIHRGVGIAKEINATA-SGKKLADFKAALGAQQHASIASLRADVEAFAGQFPCIGFDEATMKYK 515          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A7S4BH95_CHRCT (Serine hydroxymethyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BH95_CHRCT)

HSP 1 Score: 328 bits (840), Expect = 1.670e-106
Identity = 165/289 (57.09%), Postives = 211/289 (73.01%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQETPQEIADLRAKVADFAASFPVVGFDAQTMKYK 867
            +R IDY+RMR++ D+  AYL++DMAHISGLVAAGV+P+PFE++D+VTTTTHKSLRGPRGAMIFYRKGVR   K G E ++D+   I+ SVFPG QGGPHNHTIAALATAL Q   PSFV+YQ+ V++N+     ++   GY+LVSGGTD HLLLVDL+ S         +DGAR E VLE++ +  NKNTVPGDKSA +PGGIR+GTPALT+RG     FE+VA+ +H  + I + + G G G KK++ +K  L  +    I  LR+ V  FA  FP +GF+ +TMKYK
Sbjct:  231 SRAIDYKRMREICDKVGAYLLADMAHISGLVAAGVVPTPFEYADIVTTTTHKSLRGPRGAMIFYRKGVRGHDKKGNEIMYDLEGPINQSVFPGHQGGPHNHTIAALATALHQAQQPSFVEYQKQVLKNSQAFGDAMLKLGYKLVSGGTDNHLLLVDLKPSG--------IDGARVESVLEMANVALNKNTVPGDKSAFIPGGIRVGTPALTTRGFEEEHFEKVAEIIHRGVGIAKEINGSGIG-KKLSDFKSALKSQEWPAITALRSDVESFAMQFPTIGFEEETMKYK 510          
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Match: A0A7S0Q8S8_9EUKA (Serine hydroxymethyltransferase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q8S8_9EUKA)

HSP 1 Score: 328 bits (841), Expect = 1.670e-106
Identity = 164/289 (56.75%), Postives = 210/289 (72.66%), Query Frame = 1
Query:    1 ARLIDYERMRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPRGAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALATALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLRSSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTPALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQETPQEIADLRAKVADFAASFPVVGFDAQTMKYK 867
            +R IDY RMR++ D+  AYL++DMAHISGLVAAGV+PSPFEH+D++TTTTHKSLRGPRGAMIFYRKG R   K G E ++++   I+ SVFPG QGGPHNHTI+ALATAL Q + P FV+YQ+ V+ N+     ++  +GY LVSGGT+ HLLLVDL+ S         +DGAR E VLE++ +  NKNTVPGDKSA +PGGIR+GTPALTSRG   A FE+VA+F+H  +TI + +   G G KK+A +K  L  +    I +LR+ V  F+  FP +GFD  +MKYK
Sbjct:  243 SRHIDYARMREICDKVGAYLLADMAHISGLVAAGVVPSPFEHADIITTTTHKSLRGPRGAMIFYRKGTRGHDKKGKEIMYNLEGPINQSVFPGHQGGPHNHTISALATALHQASQPEFVEYQKQVLSNSQAFGKAMLDRGYTLVSGGTENHLLLVDLKPSG--------IDGARVESVLEMANVALNKNTVPGDKSAFIPGGIRVGTPALTSRGFEEAHFEEVAEFIHRGVTIAKDINASGIG-KKLADFKSALKAQEWPAITELRSDVESFSMQFPTIGFDEASMKYK 522          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84374.19678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CA14_CAFRO3.420e-11763.92Serine hydroxymethyltransferase n=3 Tax=Cafeteria ... [more]
A0A7S2C4R3_9STRA4.540e-11360.41Serine hydroxymethyltransferase n=1 Tax=Florenciel... [more]
A0A7S2WJP7_9STRA4.820e-11159.39Serine hydroxymethyltransferase n=1 Tax=Rhizochrom... [more]
W7TN09_9STRA1.950e-10961.97Serine hydroxymethyltransferase n=3 Tax=Monodopsid... [more]
A0A5J4XZN4_9CHLO5.390e-10859.72Serine hydroxymethyltransferase n=1 Tax=Trebouxia ... [more]
A0A2D4BQ84_PYTIN6.530e-10857.68Serine hydroxymethyltransferase n=1 Tax=Pythium in... [more]
A0A7S3TWL3_EMIHU9.570e-10858.82Serine hydroxymethyltransferase n=4 Tax=Eukaryota ... [more]
A0A7S0H645_9EUKA1.700e-10759.17Serine hydroxymethyltransferase n=2 Tax=Phaeocysti... [more]
A0A7S4BH95_CHRCT1.670e-10657.09Serine hydroxymethyltransferase n=1 Tax=Chrysotila... [more]
A0A7S0Q8S8_9EUKA1.670e-10656.75Serine hydroxymethyltransferase n=1 Tax=Coccolithu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84374contigM-pyrifera_M_contig84374:3..878 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.7
Seed ortholog evalue4.3e-86
Seed eggNOG ortholog42099.EPrPV00000017894
Preferred nameSHM2
KEGG rclassRC00022,RC00112,RC01583,RC02958
KEGG koko:K00600,ko:K02974
KEGG ReactionR00945,R09099
KEGG Pathwayko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,ko03010,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523,map03010
KEGG ModuleM00140,M00141,M00177,M00179,M00346,M00532
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003824,GO:0004372,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005759,GO:0005829,GO:0005840,GO:0005886,GO:0005937,GO:0006082,GO:0006520,GO:0006544,GO:0006563,GO:0006730,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0007623,GO:0008150,GO:0008152,GO:0008187,GO:0008219,GO:0008266,GO:0008270,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009266,GO:0009314,GO:0009409,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009536,GO:0009570,GO:0009579,GO:0009626,GO:0009628,GO:0009853,GO:0009987,GO:0010035,GO:0010038,GO:0010319,GO:0012501,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0016742,GO:0017144,GO:0019752,GO:0019866,GO:0022626,GO:0030427,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0033554,GO:0034050,GO:0042133,GO:0042221,GO:0042995,GO:0043094,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043332,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044455,GO:0044463,GO:0044464,GO:0045087,GO:0045271,GO:0046394,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0048511,GO:0050896,GO:0050897,GO:0051286,GO:0051716,GO:0065007,GO:0065008,GO:0070013,GO:0070469,GO:0071704,GO:0071944,GO:0097159,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0120025,GO:0120038,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990204,GO:1990904
EggNOG free text desc.Serine hydroxymethyltransferase. Source PGD
EggNOG OGs1MCX0@121069,COG0112@1,KOG2467@2759
Ec32 ortholog descriptionserine hydroxymethyltransferase 2
Ec32 orthologEc-14_004260.1
EC2.1.2.1
COG Functional cat.E
BiGG ReactioniMM904.YBR263W,iND750.YBR263W
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Exons1
Model size876
Cds size852
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816751.2428317-CDS-M-pyrifera_M_contig84374:2..8541622816751.2428317-CDS-M-pyrifera_M_contig84374:2..854Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84374 3..854 -
1692278156.8053274-CDS-M-pyrifera_M_contig84374:2..8541692278156.8053274-CDS-M-pyrifera_M_contig84374:2..854Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84374 3..854 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816751.2555563-UTR-M-pyrifera_M_contig84374:854..8781622816751.2555563-UTR-M-pyrifera_M_contig84374:854..878Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84374 855..878 -
1692278156.8177068-UTR-M-pyrifera_M_contig84374:854..8781692278156.8177068-UTR-M-pyrifera_M_contig84374:854..878Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84374 855..878 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84374.19678.1prot_M-pyrifera_M_contig84374.19678.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84374 3..854 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84374.19678.1

>prot_M-pyrifera_M_contig84374.19678.1 ID=prot_M-pyrifera_M_contig84374.19678.1|Name=mRNA_M-pyrifera_M_contig84374.19678.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=284bp
MRKVADEHDAYLVSDMAHISGLVAAGVIPSPFEHSDVVTTTTHKSLRGPR
GAMIFYRKGVRRVLKDGTEELWDIGPKIDFSVFPGLQGGPHNHTIAALAT
ALKQVNSPSFVQYQQSVIENASTLASSLASKGYELVSGGTDTHLLLVDLR
SSEAGNSSLPVLDGARAEVVLELSGIVTNKNTVPGDKSALVPGGIRLGTP
ALTSRGLGAADFEQVADFVHEAITIGRTLRGQGFGGKKVATWKKTLIQET
PQEIADLRAKVADFAASFPVVGFDAQTMKYKHE*
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mRNA from alignment at M-pyrifera_M_contig84374:3..878-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84374.19678.1 ID=mRNA_M-pyrifera_M_contig84374.19678.1|Name=mRNA_M-pyrifera_M_contig84374.19678.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig84374:3..878- (Macrocystis pyrifera P11B4 male)
GCTCGATTGATTGACTATGAGCGAATGAGGAAAGTTGCTGATGAACATGA TGCTTACTTGGTGTCTGACATGGCCCACATTTCTGGACTTGTAGCTGCAG GAGTGATCCCTTCTCCGTTCGAGCATTCCGATGTTGTCACCACCACAACA CACAAATCGTTGCGTGGCCCCAGAGGTGCGATGATTTTCTATCGCAAAGG TGTGCGTCGTGTTTTGAAGGATGGCACCGAAGAATTGTGGGACATTGGTC CAAAGATCGACTTTTCAGTGTTCCCAGGACTTCAAGGAGGACCACACAAC CACACGATTGCTGCACTTGCCACTGCACTCAAACAAGTCAACTCTCCAAG CTTTGTACAGTATCAACAAAGTGTGATTGAGAACGCAAGCACTCTTGCAT CTTCTCTTGCAAGCAAAGGGTACGAATTAGTATCTGGAGGAACTGACACA CATCTTCTCCTCGTAGATCTTCGCTCTTCAGAAGCCGGGAACAGCTCTCT TCCAGTTCTTGATGGTGCGCGTGCAGAAGTAGTCCTTGAACTCTCTGGAA TTGTAACCAACAAGAACACAGTTCCAGGCGACAAATCAGCACTTGTTCCT GGTGGAATTCGTTTGGGAACACCTGCTCTTACCTCAAGAGGATTGGGAGC AGCTGATTTTGAACAAGTAGCAGACTTTGTGCATGAAGCTATCACCATTG GACGCACCCTTCGCGGCCAAGGGTTTGGCGGGAAGAAGGTTGCAACTTGG AAGAAAACTCTCATCCAAGAAACACCCCAAGAAATTGCAGACCTCCGAGC GAAAGTAGCAGACTTTGCTGCTTCCTTCCCTGTCGTTGGGTTTGATGCGC AAACGATGAAGTACAAGCACGAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84374:3..878-

>mRNA_M-pyrifera_M_contig84374.19678.1 ID=mRNA_M-pyrifera_M_contig84374.19678.1|Name=mRNA_M-pyrifera_M_contig84374.19678.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1704bp|location=Sequence derived from alignment at M-pyrifera_M_contig84374:3..878- (Macrocystis pyrifera P11B4 male)
ATGAGGAAAGTTGCTGATGAACATGATGCTTACTTGGTGTCTGACATGGC
CCACATTTCTGGACTTGTAGCTGCAGGAGTGATCCCTTCTCCGTTCGAGC
ATTCCGATGTTGTCACCACCACAACACACAAATCGTTGCGTGGCCCCAGA
GGTGCGATGATTTTCTATCGCAAAGGTGTGCGTCGTGTTTTGAAGGATGG
CACCGAAGAATTGTGGGACATTGGTCCAAAGATCGACTTTTCAGTGTTCC
CAGGACTTCAAGGAGGACCACACAACCACACGATTGCTGCACTTGCCACT
GCACTCAAACAAGTCAACTCTCCAAGCTTTGTACAGTATCAACAAAGTGT
GATTGAGAACGCAAGCACTCTTGCATCTTCTCTTGCAAGCAAAGGGTACG
AATTAGTATCTGGAGGAACTGACACACATCTTCTCCTCGTAGATCTTCGC
TCTTCAGAAGCCGGGAACAGCTCTCTTCCAGTTCTTGATGGTGCGCGTGC
AGAAGTAGTCCTTGAACTCTCTGGAATTGTAACCAACAAGAACACAGTTC
CAGGCGACAAATCAGCACTTGTTCCTGGTGGAATTCGTTTGGGAACACCT
GCTCTTACCTCAAGAGGATTGGGAGCAGCTGATTTTGAACAAGTAGCAGA
CTTTGTGCATGAAGCTATCACCATTGGACGCACCCTTCGCGGCCAAGGGT
TTGGCGGGAAGAAGGTTGCAACTTGGAAGAAAACTCTCATCCAAGAAACA
CCCCAAGAAATTGCAGACCTCCGAGCGAAAGTAGCAGACTTTGCTGCTTC
CTTCCCTGTCGTTGGGTTTGATGCGCAAACGATGAAGTACAAGCACGAGT
GAATGAGGAAAGTTGCTGATGAACATGATGCTTACTTGGTGTCTGACATG
GCCCACATTTCTGGACTTGTAGCTGCAGGAGTGATCCCTTCTCCGTTCGA
GCATTCCGATGTTGTCACCACCACAACACACAAATCGTTGCGTGGCCCCA
GAGGTGCGATGATTTTCTATCGCAAAGGTGTGCGTCGTGTTTTGAAGGAT
GGCACCGAAGAATTGTGGGACATTGGTCCAAAGATCGACTTTTCAGTGTT
CCCAGGACTTCAAGGAGGACCACACAACCACACGATTGCTGCACTTGCCA
CTGCACTCAAACAAGTCAACTCTCCAAGCTTTGTACAGTATCAACAAAGT
GTGATTGAGAACGCAAGCACTCTTGCATCTTCTCTTGCAAGCAAAGGGTA
CGAATTAGTATCTGGAGGAACTGACACACATCTTCTCCTCGTAGATCTTC
GCTCTTCAGAAGCCGGGAACAGCTCTCTTCCAGTTCTTGATGGTGCGCGT
GCAGAAGTAGTCCTTGAACTCTCTGGAATTGTAACCAACAAGAACACAGT
TCCAGGCGACAAATCAGCACTTGTTCCTGGTGGAATTCGTTTGGGAACAC
CTGCTCTTACCTCAAGAGGATTGGGAGCAGCTGATTTTGAACAAGTAGCA
GACTTTGTGCATGAAGCTATCACCATTGGACGCACCCTTCGCGGCCAAGG
GTTTGGCGGGAAGAAGGTTGCAACTTGGAAGAAAACTCTCATCCAAGAAA
CACCCCAAGAAATTGCAGACCTCCGAGCGAAAGTAGCAGACTTTGCTGCT
TCCTTCCCTGTCGTTGGGTTTGATGCGCAAACGATGAAGTACAAGCACGA
GTGA
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