mRNA_M-pyrifera_M_contig83817.19570.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83817.19570.1
Unique NamemRNA_M-pyrifera_M_contig83817.19570.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: A0A813BE96_9DINO (ABCA1 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A813BE96_9DINO)

HSP 1 Score: 257 bits (657), Expect = 1.300e-75
Identity = 126/206 (61.17%), Postives = 158/206 (76.70%), Query Frame = 1
Query:   13 SRSHFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            ++ +FE +    RAL+  D C+  R L+K F TPDGVK AVD  +LD+++G+IFALLGHNGAGK+TT++MLTGL+PMTSG AS +G+DV  DM ++R+ +GVCPQHDVLW +LTV EHL+FFAA KGVP  ++   V   I+EVGLTEK   +S  LSGG KRKLSV IALIGGSKVV LDEPTSGMDP+SRRS W  L +++  R
Sbjct:  599 NKRNFEPLGAERRALKAADRCLTARGLKKHFDTPDGVKKAVDGVDLDVFQGEIFALLGHNGAGKSTTMTMLTGLIPMTSGVASAFGLDVSRDMDDMRRILGVCPQHDVLWPELTVAEHLTFFAAAKGVPPKEVAAAVDDTIKEVGLTEKRKVQSKALSGGMKRKLSVGIALIGGSKVVVLDEPTSGMDPYSRRSTWNILLSSKSDR 804          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: A0A5A8CLJ1_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CLJ1_CAFRO)

HSP 1 Score: 257 bits (657), Expect = 1.330e-75
Identity = 126/206 (61.17%), Postives = 158/206 (76.70%), Query Frame = 1
Query:   13 SRSHFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            ++ +FE +    RAL+  D C+  R L+K F TPDGVK AVD  +LD+++G+IFALLGHNGAGK+TT++MLTGL+PMTSG AS +G+DV  DM ++R+ +GVCPQHDVLW +LTV EHL+FFAA KGVP  ++   V   I+EVGLTEK   +S  LSGG KRKLSV IALIGGSKVV LDEPTSGMDP+SRRS W  L +++  R
Sbjct:  652 NKRNFEPLGAERRALKAADRCLTARGLKKHFDTPDGVKKAVDGVDLDVFQGEIFALLGHNGAGKSTTMTMLTGLIPMTSGVASAFGLDVSRDMDDMRRILGVCPQHDVLWPELTVAEHLTFFAAAKGVPPKEVAAAVDDTIKEVGLTEKRKVQSKALSGGMKRKLSVGIALIGGSKVVVLDEPTSGMDPYSRRSTWNILLSSKSDR 857          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: D8MBQ7_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MBQ7_BLAHO)

HSP 1 Score: 249 bits (637), Expect = 6.130e-73
Identity = 121/205 (59.02%), Postives = 156/205 (76.10%), Query Frame = 1
Query:   16 RSHFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            R   E +P  L ALE  + CI+++NL K FSTP G K+AV+   + MYEGQIF LLGHNGAGKTTT++ML G+LP++ G A++YG+D+ EDM  IR  M VCPQ D+LWD+LTV+EHL   A L+ VP+++IN+ + + + +VGLTEK++ +S  LSGGQKRKLSVA+ALIG SKVVFLDEPTSGMDP+SRR  W  L+N R  R
Sbjct:  257 RKFIEEVPADLHALEGENRCIQIKNLVKVFSTPVGPKIAVNDLNVVMYEGQIFCLLGHNGAGKTTTINMLCGMLPVSDGTATVYGLDICEDMPAIRNMMAVCPQFDILWDNLTVKEHLYIAAKLQNVPKNEINERISSLVYDVGLTEKLNKKSKTLSGGQKRKLSVAMALIGNSKVVFLDEPTSGMDPYSRRMIWNLLRNYRSER 461          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: A0A482UJG0_9ARCH (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UJG0_9ARCH)

HSP 1 Score: 238 bits (607), Expect = 7.800e-72
Identity = 121/234 (51.71%), Postives = 151/234 (64.53%), Query Frame = 1
Query:   46 LRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSG---------------------------------------MDPFSRRSCWATLQNNREGR 630
            +R  E     + VR LRKEF TPDG+K AVD   + MYEGQIF LLGHNGAGK+TT++MLTG++  T+G  S++G DV   +S IR+ MGVCPQHDVLW +LTV+EHL  +A +KG+P + +N+E+   IR VGLTEK+D +S  LSGGQ+RKLSV IAL+GGS+V+FLDEPTSG                                       MDP+SRRS W  LQNNR GR
Sbjct:  173 VRMQEAEGRVVSVRGLRKEFDTPDGIKTAVDGINMTMYEGQIFVLLGHNGAGKSTTINMLTGMMEPTAGNMSVFGKDVSSQLSAIREDMGVCPQHDVLWPELTVKEHLRLYADIKGIPYNKVNEEIDNAIRTVGLTEKVDVQSRKLSGGQRRKLSVCIALMGGSRVIFLDEPTSGTFAAHVSAHQRCVVSAGTSRPSLSRTHAHAPARPPALAGMDPYSRRSTWQILQNNRAGR 406          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: A0A485KVE0_9STRA (Aste57867_11902 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVE0_9STRA)

HSP 1 Score: 244 bits (623), Expect = 4.800e-71
Identity = 122/206 (59.22%), Postives = 155/206 (75.24%), Query Frame = 1
Query:   13 SRSHFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            SR   E +   LR  EE    +++ NLRKEF  P G+KV+V    L MY+ QI  LLGHNGAGKTT +SMLTG++P TSG A+I+G+ +++D+SEIR  +G+CPQHDVL+ +LTV+EHL F+A +KG   + +  EV +KI EVGLTEK  ARS+DLSGG KRKLS+AIAL+G S+VVFLDEPTSGMDP+SRRS W  +QNNR  R
Sbjct:  681 SRETIEPVGPELRQQEETGDALQIINLRKEFRVPGGIKVSVKGMNLTMYKNQITCLLGHNGAGKTTLISMLTGMIPATSGDATIHGLSLKQDLSEIRHSLGMCPQHDVLYAELTVQEHLLFYARIKGFRGAALMAEVESKISEVGLTEKRQARSSDLSGGMKRKLSLAIALLGDSRVVFLDEPTSGMDPYSRRSSWEIIQNNRYNR 886          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: A0A485K6J5_9STRA (Aste57867_43 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K6J5_9STRA)

HSP 1 Score: 241 bits (616), Expect = 4.160e-70
Identity = 123/203 (60.59%), Postives = 148/203 (72.91%), Query Frame = 1
Query:   22 HFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            + E   Q L+A E    C+++  LRK F T DG KVAV   ++ MY GQI A+LGHNGAGKTTT+SMLTGL P TSG A ++G  + EDM ++R  MGVCPQHDVL+D+LTV +HL  +AALK VP +D+  +V   I+EVGLTEK +  S  LSGGQKRKLSVAIALIG S+VVFLDEPTSGMDP+SRR  W  LQ NR  R
Sbjct:  507 NVEEPSQELKAKERAGDCVQICGLRKAFQTEDGEKVAVHSLDVTMYAGQITAMLGHNGAGKTTTISMLTGLYPPTSGTAYVFGKTITEDMDQLRASMGVCPQHDVLYDELTVDQHLQLYAALKNVPPADVAAQVNEMIKEVGLTEKRNVMSKKLSGGQKRKLSVAIALIGHSQVVFLDEPTSGMDPYSRRFTWNVLQQNRANR 709          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: A0A662Y4H2_9STRA (ABC transporter domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4H2_9STRA)

HSP 1 Score: 235 bits (599), Expect = 7.510e-70
Identity = 120/208 (57.69%), Postives = 151/208 (72.60%), Query Frame = 1
Query:   10 GSRSHFEAIPQHLRALEERDACIKVRNLRKEFSTPDG-VKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            G  +  E +   L A E++  C++++ LRKEFS  DG V VAV    L +Y GQI ALLGHNGAGKTTT+SMLTGL+P TSG A++YG  V+ D +E+R+ MG+CPQHDVL+++LTV EHL  F  +K VP + +++EV   IREVGL EK    S  LSGGQKRKLSVA+A +G SK+VFLDEPTSGMDP+SRR  W  LQ NR+ R
Sbjct:  290 GLVASVEPVNAALAAQEQKGTCLQIQGLRKEFSGDDGEVNVAVQGLNLTLYAGQISALLGHNGAGKTTTISMLTGLIPPTSGDATLYGRSVQHDFNELRQIMGICPQHDVLFNELTVEEHLRLFGTMKNVPLAKLDEEVERMIREVGLVEKRKVISKKLSGGQKRKLSVALAFMGDSKLVFLDEPTSGMDPYSRRFTWNLLQRNRDDR 497          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: A0A196SA29_BLAHN (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SA29_BLAHN)

HSP 1 Score: 239 bits (611), Expect = 9.520e-70
Identity = 117/203 (57.64%), Postives = 152/203 (74.88%), Query Frame = 1
Query:   22 HFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            + E  P+ L+ L +   C+++++L K F+TP G KV VD   + MYEGQIF LLGHNGAGKTT++SML+G+LP+T G A ++G+D+ EDM +IR  M VCPQ D+LWD+LTV+EHL   A L+ VP+ DI   + + + +VGLTEK++  S  LSGGQKRKLSVA+ALIG SKVVFLDEPTSGMDP+SRR  W  L+N RE R
Sbjct:  580 YIEEEPKELKELAKEYRCVEIQHLVKVFNTPVGPKVVVDDLNVKMYEGQIFCLLGHNGAGKTTSISMLSGMLPVTEGTAKVFGLDICEDMPKIRNMMAVCPQFDILWDNLTVKEHLYIAAKLQNVPKKDIERRIKSLVYDVGLTEKLNKCSKTLSGGQKRKLSVAMALIGDSKVVFLDEPTSGMDPYSRRMIWNLLRNYRENR 782          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: UPI0007122804 (ABC transporter family protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007122804)

HSP 1 Score: 240 bits (612), Expect = 1.430e-69
Identity = 118/205 (57.56%), Postives = 147/205 (71.71%), Query Frame = 1
Query:   16 RSHFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            + + E + + L+ L E +  + +  L K F TP G K+AV+   + MYEGQIF LLGHNGAGKTT +SML G++P TSG A +YG+ + EDM  IR  M VCPQ D+LWD+LTVREHL   A L+ VP+S+IN  +   + +VGLTEKID  S  LSGGQKRKLSVA++LIG SKVVFLDEPTSGMDP+SRR  W  L+N RE R
Sbjct:  405 KRYIEEVGKDLQKLGEEERTVSIEGLYKVFDTPVGPKIAVNDLNVTMYEGQIFCLLGHNGAGKTTAISMLCGMIPATSGTAKVYGLSINEDMPTIRNMMAVCPQFDILWDNLTVREHLYIAARLQNVPKSEINQRIQTLVYDVGLTEKIDKYSKTLSGGQKRKLSVAMSLIGNSKVVFLDEPTSGMDPYSRRMIWNLLRNYREDR 609          
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Match: A0A3S0ZCZ1_ELYCH (ABC transporter domain-containing protein (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZCZ1_ELYCH)

HSP 1 Score: 234 bits (597), Expect = 1.540e-69
Identity = 121/203 (59.61%), Postives = 146/203 (71.92%), Query Frame = 1
Query:   22 HFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDELDMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEIRKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGLTEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCWATLQNNREGR 630
            HFE  P  L      +A IK+  LRK F    G KVAV+   L MYEGQI ALLGHNGAGKTTT+SMLTG +  TSG A + G D+  D+  +RK +G+CPQH++L+D +TV+EHL FFA LKGV RS+I +EV   ++EVGL  K+  RS +LSGGQKRKLSV IALIGGSK+V LDEPTSGMDP +RR  W+ LQ  REGR
Sbjct:  272 HFERDPSGL------NAGIKIAQLRKRF----GKKVAVEGTSLKMYEGQITALLGHNGAGKTTTMSMLTGFITPTSGTAEVNGCDIRHDIDGVRKSLGLCPQHNILFDSMTVKEHLIFFATLKGVKRSEIKNEVMTTVKEVGLETKVHFRSHELSGGQKRKLSVGIALIGGSKIVILDEPTSGMDPSARRQTWSVLQRAREGR 464          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83817.19570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A813BE96_9DINO1.300e-7561.17ABCA1 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A8... [more]
A0A5A8CLJ1_CAFRO1.330e-7561.17Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
D8MBQ7_BLAHO6.130e-7359.02Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
A0A482UJG0_9ARCH7.800e-7251.71ATP-binding cassette domain-containing protein (Fr... [more]
A0A485KVE0_9STRA4.800e-7159.22Aste57867_11902 protein n=1 Tax=Aphanomyces stella... [more]
A0A485K6J5_9STRA4.160e-7060.59Aste57867_43 protein n=1 Tax=Aphanomyces stellatus... [more]
A0A662Y4H2_9STRA7.510e-7057.69ABC transporter domain-containing protein (Fragmen... [more]
A0A196SA29_BLAHN9.520e-7057.64ATP-binding Cassette (ABC) Superfamily n=1 Tax=Bla... [more]
UPI00071228041.430e-6957.56ABC transporter family protein n=1 Tax=Blastocysti... [more]
A0A3S0ZCZ1_ELYCH1.540e-6959.61ABC transporter domain-containing protein (Fragmen... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83817contigM-pyrifera_M_contig83817:3..632 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score240.7
Seed ortholog evalue6e-61
Seed eggNOG ortholog42099.EPrPV00000022121
KEGG koko:K05643,ko:K05645
KEGG TC3.A.1.211
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031090,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0098588,GO:0098805,GO:0099120
EggNOG free text desc.ATP-binding Cassette (ABC) Superfamily. Source PGD
EggNOG OGs1MAS4@121069,COG1131@1,KOG0059@2759
COG Functional cat.I
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons1
Model size630
Cds size630
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816746.0735478-CDS-M-pyrifera_M_contig83817:2..6321622816746.0735478-CDS-M-pyrifera_M_contig83817:2..632Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83817 3..632 -
1692278153.4741368-CDS-M-pyrifera_M_contig83817:2..6321692278153.4741368-CDS-M-pyrifera_M_contig83817:2..632Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83817 3..632 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83817.19570.1prot_M-pyrifera_M_contig83817.19570.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83817 3..632 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83817.19570.1

>prot_M-pyrifera_M_contig83817.19570.1 ID=prot_M-pyrifera_M_contig83817.19570.1|Name=mRNA_M-pyrifera_M_contig83817.19570.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
MPPGSRSHFEAIPQHLRALEERDACIKVRNLRKEFSTPDGVKVAVDLDEL
DMYEGQIFALLGHNGAGKTTTLSMLTGLLPMTSGKASIYGMDVEEDMSEI
RKHMGVCPQHDVLWDDLTVREHLSFFAALKGVPRSDINDEVFAKIREVGL
TEKIDARSADLSGGQKRKLSVAIALIGGSKVVFLDEPTSGMDPFSRRSCW
ATLQNNREGR
back to top

mRNA from alignment at M-pyrifera_M_contig83817:3..632-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83817.19570.1 ID=mRNA_M-pyrifera_M_contig83817.19570.1|Name=mRNA_M-pyrifera_M_contig83817.19570.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig83817:3..632- (Macrocystis pyrifera P11B4 male)
ATGCCTCCAGGTTCACGATCTCATTTTGAAGCGATTCCACAACATTTGCG TGCTTTGGAAGAACGCGATGCATGCATCAAAGTTCGTAACCTTCGCAAGG AATTCTCGACTCCAGATGGTGTCAAGGTTGCTGTCGACTTGGATGAACTG GACATGTATGAAGGTCAAATTTTTGCATTGTTGGGACACAATGGTGCTGG GAAAACTACCACCCTATCAATGCTTACTGGTCTTCTTCCAATGACTTCTG GGAAAGCATCGATTTATGGCATGGATGTTGAGGAAGACATGAGCGAGATC CGAAAGCACATGGGAGTGTGTCCACAACATGATGTCTTGTGGGATGATTT AACAGTACGCGAACATTTGTCCTTCTTTGCTGCATTGAAAGGTGTGCCAC GAAGTGATATTAACGATGAAGTATTTGCCAAGATTCGTGAAGTTGGTCTC ACAGAAAAGATTGATGCACGTTCTGCAGATCTTTCAGGTGGACAAAAACG AAAATTGAGTGTTGCAATTGCATTGATTGGTGGCTCAAAGGTCGTCTTTT TGGACGAACCAACGAGTGGAATGGACCCTTTCAGTCGTCGAAGCTGTTGG GCAACATTGCAAAACAACAGAGAAGGACGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig83817:3..632-

>mRNA_M-pyrifera_M_contig83817.19570.1 ID=mRNA_M-pyrifera_M_contig83817.19570.1|Name=mRNA_M-pyrifera_M_contig83817.19570.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig83817:3..632- (Macrocystis pyrifera P11B4 male)
ATGCCTCCAGGTTCACGATCTCATTTTGAAGCGATTCCACAACATTTGCG
TGCTTTGGAAGAACGCGATGCATGCATCAAAGTTCGTAACCTTCGCAAGG
AATTCTCGACTCCAGATGGTGTCAAGGTTGCTGTCGACTTGGATGAACTG
GACATGTATGAAGGTCAAATTTTTGCATTGTTGGGACACAATGGTGCTGG
GAAAACTACCACCCTATCAATGCTTACTGGTCTTCTTCCAATGACTTCTG
GGAAAGCATCGATTTATGGCATGGATGTTGAGGAAGACATGAGCGAGATC
CGAAAGCACATGGGAGTGTGTCCACAACATGATGTCTTGTGGGATGATTT
AACAGTACGCGAACATTTGTCCTTCTTTGCTGCATTGAAAGGTGTGCCAC
GAAGTGATATTAACGATGAAGTATTTGCCAAGATTCGTGAAGTTGGTCTC
ACAGAAAAGATTGATGCACGTTCTGCAGATCTTTCAGGTGGACAAAAACG
AAAATTGAGTGTTGCAATTGCATTGATTGGTGGCTCAAAGGTCGTCTTTT
TGGACGAACCAACGAGTGGAATGGACCCTTTCAGTCGTCGAAGCTGTTGG
GCAACATTGCAAAACAACAGAGAAGGACGCATGCCTCCAGGTTCACGATC
TCATTTTGAAGCGATTCCACAACATTTGCGTGCTTTGGAAGAACGCGATG
CATGCATCAAAGTTCGTAACCTTCGCAAGGAATTCTCGACTCCAGATGGT
GTCAAGGTTGCTGTCGACTTGGATGAACTGGACATGTATGAAGGTCAAAT
TTTTGCATTGTTGGGACACAATGGTGCTGGGAAAACTACCACCCTATCAA
TGCTTACTGGTCTTCTTCCAATGACTTCTGGGAAAGCATCGATTTATGGC
ATGGATGTTGAGGAAGACATGAGCGAGATCCGAAAGCACATGGGAGTGTG
TCCACAACATGATGTCTTGTGGGATGATTTAACAGTACGCGAACATTTGT
CCTTCTTTGCTGCATTGAAAGGTGTGCCACGAAGTGATATTAACGATGAA
GTATTTGCCAAGATTCGTGAAGTTGGTCTCACAGAAAAGATTGATGCACG
TTCTGCAGATCTTTCAGGTGGACAAAAACGAAAATTGAGTGTTGCAATTG
CATTGATTGGTGGCTCAAAGGTCGTCTTTTTGGACGAACCAACGAGTGGA
ATGGACCCTTTCAGTCGTCGAAGCTGTTGGGCAACATTGCAAAACAACAG
AGAAGGACGC
back to top