mRNA_M-pyrifera_M_contig83766.19555.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83766.19555.1
Unique NamemRNA_M-pyrifera_M_contig83766.19555.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: T0QIX6_SAPDV (Eukaryotic translation initiation factor 2A n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QIX6_SAPDV)

HSP 1 Score: 255 bits (652), Expect = 2.710e-77
Identity = 124/292 (42.47%), Postives = 186/292 (63.70%), Query Frame = 1
Query:   10 NVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNG 873
            N+ VW+V +GS +A F  +    + WP + +SSD  +AAR+   GV VY  + + +    ++ LE+  + S++PG  PY++A+F    + KP SV ++ FP  +  +  +A +S ++A D + +W+P+G AL+   +TD   +  +YY ET  FFL + G   C++P +K+G VHDVQW+P   GF V+AGS PA  TL+D    PVF+ G A RNT+ W+PHGRFL +AGFG+LPG +DFWD ++ K LG+A +       WSPDSR+F  AT  P +RVDNG  +F+Y+G
Sbjct:  116 NLIVWDVSNGSIIARFNQKTYTRDHWPSIQWSSDETIAARLSGSGVQVYNGRAIGAGNIGNIVLENTAKFSVAPGSIPYKIALFVPEKKGKPASVRVYPFPP-NTAQSHVAFKSFYKAQDVKLKWAPNGSALIIETSTDVDTSGKSYYGETNLFFLQSDGQYDCSIPVTKQGPVHDVQWDPTSRGFVVLAGSMPANATLYDNQACPVFEFGAASRNTISWSPHGRFLCLAGFGNLPGHMDFWDRNKLKKLGSATSECATVHGWSPDSRYFATATTFPRVRVDNGFKIFKYDG 406          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: A0A1V9Z1R0_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1R0_9STRA)

HSP 1 Score: 255 bits (651), Expect = 3.480e-77
Identity = 126/296 (42.57%), Postives = 185/296 (62.50%), Query Frame = 1
Query:   10 NVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNGAKVL 885
            N+ VW+V +GS +A F  +  + + WP + +SSD  +AAR+   GV VY    +      ++ALE+  + S++PG  PY++A+F    + KP SV +F FP  +     +A +S ++A D + +W+P+G AL+   +TD   +  +YY ET  FFL + G   C++P +K+G VHDVQW+P   GF V+AGS PA  TL+     P F+ G A RNT+ W+PHGRFL +AGFG+LPG +DFWD ++ K LG+A +       WSPDSR+F  AT  P +RVDNG  LF+Y+G  V+
Sbjct:  116 NLIVWDVATGSTIARFNQKTYSRDHWPSIQWSSDETIAARLSGGGVQVYKGTAIGGGSIGNIALENTTKFSVAPGGLPYKIALFVPEKKGKPASVRVFPFPP-NAASSHVAFKSFYKAQDVKLKWAPNGSALIIETSTDVDTSGKSYYGETNLFFLQSDGQYDCSIPVTKEGPVHDVQWDPTSRGFVVLAGSMPANATLYTNKAVPTFEFGAASRNTISWSPHGRFLCLAGFGNLPGHMDFWDRNKLKKLGSATSECATVHTWSPDSRYFATATTFPRVRVDNGFKLFKYDGTLVV 410          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: A0A024UG74_9STRA (Eukaryotic translation initiation factor 2A n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UG74_9STRA)

HSP 1 Score: 254 bits (649), Expect = 9.020e-77
Identity = 127/294 (43.20%), Postives = 189/294 (64.29%), Query Frame = 1
Query:   10 NVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGT--ADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNG 873
            N+ VW+  +GS +A F  +  + E WP + +SSD L+AAR   +GV V+  + + +    ++ALE+    S++PG  PY++A+F    + KP SV +F FP  +  +  +A +S ++A + + +WSP+G AL+   +TD   +  +YY ET  FF+ + G   C++P +K+G VHDVQW+P   GF V+AGS P+  TL+D    PVF+ G A RN + W+PHGRFL +AGFG+LPG +DFWD ++ K LG+  A+ A TH   WSPDSR+F  AT  P +RVDNG  LF+Y+G
Sbjct:  122 NLIVWDAATGSIIARFNQKTYSREQWPSLQWSSDELIAARQSNNGVQVFNGRAIGAGSIGNIALENTASFSVAPGGLPYKIALFVPEKKGKPASVRIFPFPP-NATQSHVAFKSFYKAQEVKMKWSPNGSALIIETSTDVDTSGKSYYGETNLFFVQSDGQYDCSIPLTKEGTVHDVQWDPTSKGFVVIAGSMPSNATLYDNKACPVFEFGSAWRNVISWSPHGRFLCLAGFGNLPGNMDFWDRNKLKKLGSTKAECATTH--GWSPDSRYFYTATTFPRVRVDNGFKLFKYDG 412          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: F0W7N3_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7N3_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.660e-76
Identity = 127/296 (42.91%), Postives = 183/296 (61.82%), Query Frame = 1
Query:    1 EAHNVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNGA 876
            +A N+ +W+  +G  +  F  R  A ++WP V +SSD L+  R  A+GV +Y+    S +   H+ L + R  S+SP   PYR+A+F    + KP SV +FE+P   +   A+A +S ++A +   +WSP+G +L+    TD   +  +YY ET  FFL A G   C VP  K+G VHDVQW P G GF V+AG+ P++ TL+D    P+FD G A RN + W+PHGRFL +AGFG+L G +DFWD ++ K +G+A++       WSPDSR+FL AT  P LRVDNG  +F Y+G+
Sbjct:  112 DADNLLIWDASNGDILGRFPQRQYARDNWPFVEWSSDELICCRQTANGVMIYSGNDFSKS-LGHINLPNARSFSISPTNGPYRVAIFVPEKKGKPASVKIFEYPNGLDA--AVATKSFYKAQEVTLKWSPNGTSLIIETRTDVDTSGKSYYGETGLFFLQADGQYDCIVPLMKEGQVHDVQWEPTGRGFVVLAGAMPSSATLYDQKANPIFDFGTASRNHISWSPHGRFLCLAGFGNLAGDMDFWDRNKLKKMGSANSNSATCHTWSPDSRYFLTATTFPRLRVDNGYKIFTYDGS 404          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: L1J9P3_GUITC (Eukaryotic translation initiation factor 2A n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J9P3_GUITC)

HSP 1 Score: 252 bits (643), Expect = 8.470e-76
Identity = 124/295 (42.03%), Postives = 184/295 (62.37%), Query Frame = 1
Query:   10 NVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGDSCA-VPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNGAKV 882
            N+ VW+  SG+ ++AF+ +  ++ESWP + ++SD L+A   + +GV +Y  K +       +  E +   S++PGP PY++A F    + +P ++ LF +P ++EP   +A + +F+A+D  F WSP G A+V   +TD      +YY E++  F SA G +   V  SK+G +HDV W+P G  F VV G  PA  TLFD  CK +FD G   RNT+ WAPHGRFL + GFG++ G ++FWD +RKK++    A GT   +WSP SR+FL AT+ P LRVDNG T+F+Y+G  V
Sbjct:  111 NLRVWDSKSGAELSAFSQKNFSKESWPYLKWTSDELIACMQITNGVHLYNGKDIKKGVLAKIEQEKLSAFSVAPGPLPYKIATFVPEVKDQPATMKLFSYPNVTEP---VATKKMFRANDASFLWSPTGTAVVIRTSTDVDSTGKSYYGESKLTFFSADGRTEGNVALSKEGPIHDVAWSPSGKEFVVVYGFMPAKATLFDEKCKAIFDFGTGSRNTISWAPHGRFLLLGGFGNISGNLEFWDNNRKKLIANVKAPGTTNWSWSPCSRYFLTATLFPRLRVDNGFTIFKYDGTSV 402          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: A0A1V9Z8A3_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z8A3_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.030e-75
Identity = 120/292 (41.10%), Postives = 185/292 (63.36%), Query Frame = 1
Query:   10 NVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNG 873
            N+ VW++ +G+ +A F  +    + WP + +SSD  +AAR+   GV +Y  + + +    ++ALE+  + S++PG  PY++A+F    + KP S  +++FP  +     +A +S ++A D + +W+P+G AL+   +TD   +  +YY ET  FFL + G   C++P +K+G VHDVQW+P   GF V+AGS PA  TL+D    P F+ G A RNT+ W+PHGRFL +AGFG+LPG +DFWD ++ K LG+A +       WSPDSR+F  AT  P +RVDNG  +F+Y+G
Sbjct:  112 NLIVWDISNGTIIARFNQKSYTRDHWPSIQWSSDEAIAARLSGGGVQIYNGRSIGAGNIGNIALENTTKFSVAPGGIPYKIALFVPEKKGKPASTRIYQFPPNAS-NSHVAFKSFYKAQDVKLKWAPNGSALIIETSTDVDTSGKSYYGETNLFFLQSDGQYDCSIPVTKQGPVHDVQWDPASRGFVVLAGSMPANATLYDNKACPTFEFGAASRNTISWSPHGRFLCLAGFGNLPGHMDFWDRNKLKKLGSATSECATVHCWSPDSRYFATATTFPRVRVDNGYKIFKYDG 402          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: A0A485KMC5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMC5_9STRA)

HSP 1 Score: 250 bits (639), Expect = 2.430e-75
Identity = 122/292 (41.78%), Postives = 186/292 (63.70%), Query Frame = 1
Query:   10 NVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNG 873
            N+ VW+  +GS VA F+ +  + + WP + +SSD L+AAR+   GV V+  + + +    ++ALE+    S++PG  PY++A+F    + KP SV +F FP  +  +  +A +S ++A + + +WSP+G AL+   +TD   +  +YY ET  FF+ + G   C++P +K+G VHDVQW+P   GF V+AG+ P+  TL+D    PVF+ G A RN + W+PHGRFL +AGFG+LPG +DFWD ++ K LG+  A       WSPDSR+F  AT  P +RVDNG  +F+Y+G
Sbjct:  116 NLIVWDATNGSIVARFSQKTYSRDQWPSLQWSSDELIAARMSNSGVQVFNGRAIGAGSIGNIALENTTNFSVAPGGLPYKIALFVPEKKGKPASVRIFPFPPNAS-QTHVAFKSFYKAQEVKMKWSPNGNALIIETSTDVDTSGKSYYGETNLFFVQSDGQYDCSIPLTKEGTVHDVQWDPTSKGFVVIAGAMPSNATLYDNKACPVFEFGSAWRNVISWSPHGRFLCLAGFGNLPGNMDFWDRNKLKKLGSTKAECATVHGWSPDSRYFATATTFPRVRVDNGFKIFKYDG 406          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: A0A6G0X7T5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7T5_9STRA)

HSP 1 Score: 249 bits (637), Expect = 4.500e-75
Identity = 120/292 (41.10%), Postives = 186/292 (63.70%), Query Frame = 1
Query:   10 NVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNG 873
            N+ VW+  +GS +A F  +  + + WP + +SSD L+AAR+  +GV V+  + + +    ++ LE+    S++PG  PY++A+F    + KP SV +F FP  +  +  +A +S ++A + + +WSP+G AL+   +TD   +  +YY ET  FF+ + G   C++P +K+GAVHDVQW+P   GF V+AG+ P+  TL+D    PVF+ G A RN + W+PHGRFL +AGFG+LPG +DFWD ++ K LG+  +       WSPDSR+F  AT  P +RVDNG  +F+Y+G
Sbjct:  119 NLIVWDAKNGSIIARFNQKTYSRDQWPSLQWSSDELIAARLSNNGVQVFNGRAIGAGSIGNITLENTTNFSVAPGGLPYKIALFVPEKKGKPASVRIFPFPP-NATQSHVAFKSFYKAQEVKMKWSPNGNALIIETSTDVDTSGKSYYGETNLFFVQSDGQYDCSIPLTKEGAVHDVQWDPTSKGFVVIAGAMPSNATLYDNKACPVFEFGSAWRNVISWSPHGRFLCLAGFGNLPGNMDFWDRNKLKKLGSTKSECATCYGWSPDSRYFATATTHPRVRVDNGFKIFKYDG 409          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: A0A024G800_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G800_9STRA)

HSP 1 Score: 244 bits (624), Expect = 4.270e-73
Identity = 124/296 (41.89%), Postives = 182/296 (61.49%), Query Frame = 1
Query:    1 EAHNVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNGA 876
            EA N+ +W+  +G+ V  F  R  A ++WP V +S D ++  R  A+GV +Y+    S +   H+ L + R  S+SP   PY++A+F      KP SV +FE+P  +     +A++S ++A +   +WSP+G +L+    TD   +  +YY ET  FFL   G   C VP  K+G VHDVQW+P G GF V+AG+ P++ TL+D    P+FD G A RN + W+PHGRFL +AGFG+L G +DFWD ++ K +G+A++       WSPDSR+F+ AT  P LRVDNG  +F Y+GA
Sbjct:  112 EADNLLIWDAINGNIVGQFPQRQYARDNWPFVEWSFDEVICCRQTANGVMIYSGNEFSKS-LDHINLPNARSFSISPTGNPYKVAIFVPEKSGKPASVKIFEYP--NHLNAFVASKSFYKAQEVTLKWSPNGTSLIIETRTDVDTSGKSYYGETGLFFLQTDGQYDCIVPLMKEGQVHDVQWDPTGRGFVVLAGAMPSSATLYDQKANPIFDFGTASRNHISWSPHGRFLCLAGFGNLAGDMDFWDRNKLKKMGSANSNSATCHTWSPDSRYFVTATTFPRLRVDNGYKIFTYDGA 404          
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Match: A0A5D6XXE7_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXE7_9STRA)

HSP 1 Score: 244 bits (623), Expect = 9.530e-73
Identity = 123/295 (41.69%), Postives = 179/295 (60.68%), Query Frame = 1
Query:    1 EAHNVHVWEVGSGSRVAAFTHRWQAEESWP-VSYSSDGLVAARVLADGVGVYASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLFEFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATD--RARDTYYAETRAFFLSAKGD-SCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFDASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILGTADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNG 873
            E  N+ VW   SG+ VA F  +  + +SWP + +SSD  + AR  A+GV +Y+ + +S+     + L +    S++PG  PY++A F    + KP SV +++FP +      +A +S F+A +   +WSP G AL+    TD      +YY ET  FFL + G   C VP +K+G +HDVQW+P G GF V+AG+ P   TL+D    P+F+ G A RN + W+PHGRFL +AGFG+L G +DFW+ ++ K +G+A++      AWSPDSR+F  AT  P LRVDNG   FRY+G
Sbjct:  112 ELGNLIVWNAVSGAEVARFNQKSYSRDSWPSIQWSSDETICARQSANGVMLYSGQNMSAGSIGQINLPNTASFSVAPGSAPYKIAAFVPEKKGKPASVRVYQFPGLET---VVAHKSFFKAQEVAMKWSPTGSALIIETRTDVDTTGKSYYGETGLFFLQSDGQYDCIVPLTKEGPIHDVQWDPTGRGFVVLAGTMPCNATLYDNKAIPIFEFGAAPRNHVSWSPHGRFLCIAGFGNLRGDMDFWERNKLKKMGSANSNSATCFAWSPDSRFFFTATTFPRLRVDNGFKAFRYDG 403          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83766.19555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
T0QIX6_SAPDV2.710e-7742.47Eukaryotic translation initiation factor 2A n=2 Ta... [more]
A0A1V9Z1R0_9STRA3.480e-7742.57Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A024UG74_9STRA9.020e-7743.20Eukaryotic translation initiation factor 2A n=2 Ta... [more]
F0W7N3_9STRA6.660e-7642.91Eukaryotic translation initiation factor 2A n=1 Ta... [more]
L1J9P3_GUITC8.470e-7642.03Eukaryotic translation initiation factor 2A n=2 Ta... [more]
A0A1V9Z8A3_9STRA1.030e-7541.10Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A485KMC5_9STRA2.430e-7541.78Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A6G0X7T5_9STRA4.500e-7541.10Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A024G800_9STRA4.270e-7341.89Eukaryotic translation initiation factor 2A n=1 Ta... [more]
A0A5D6XXE7_9STRA9.530e-7341.69Eukaryotic translation initiation factor 2A n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83766contigM-pyrifera_M_contig83766:1..885 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score259.2
Seed ortholog evalue2.3e-66
Seed eggNOG ortholog112098.XP_008608872.1
Preferred nameEIF2A
KEGG koko:K11294,ko:K15026
KEGG Pathwayko05130,map05130
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005850,GO:0006355,GO:0006357,GO:0006412,GO:0006413,GO:0006417,GO:0006464,GO:0006468,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006984,GO:0006991,GO:0006996,GO:0007154,GO:0007165,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0015935,GO:0016043,GO:0016310,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0032268,GO:0032933,GO:0032991,GO:0033554,GO:0034248,GO:0034622,GO:0034641,GO:0034645,GO:0036211,GO:0042254,GO:0042255,GO:0042594,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071501,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:1990928,GO:2000112,GO:2001141
EggNOG free text desc.translation initiation factor binding
EggNOG OGsCOG5354@1,KOG2315@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03012,ko03019,ko03036
Exons1
Model size885
Cds size885
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816745.333236-CDS-M-pyrifera_M_contig83766:0..8851622816745.333236-CDS-M-pyrifera_M_contig83766:0..885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83766 1..885 -
1692278153.0430343-CDS-M-pyrifera_M_contig83766:0..8851692278153.0430343-CDS-M-pyrifera_M_contig83766:0..885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83766 1..885 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83766.19555.1prot_M-pyrifera_M_contig83766.19555.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83766 1..885 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83766.19555.1

>prot_M-pyrifera_M_contig83766.19555.1 ID=prot_M-pyrifera_M_contig83766.19555.1|Name=mRNA_M-pyrifera_M_contig83766.19555.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=295bp
EAHNVHVWEVGSGSRVAAFTHRWQAEESWPVSYSSDGLVAARVLADGVGV
YASKLLSSAPRCHVALEHVRRVSLSPGPPPYRLAVFCAASRSKPGSVLLF
EFPKMSEPRDALAAQSLFQASDCEFRWSPDGQALVALVATDRARDTYYAE
TRAFFLSAKGDSCAVPQSKKGAVHDVQWNPRGSGFAVVAGSSPAATTLFD
ASCKPVFDLGLAMRNTLRWAPHGRFLAVAGFGSLPGIVDFWDMDRKKILG
TADAAGTHRCAWSPDSRWFLAATITPSLRVDNGITLFRYNGAKVL
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mRNA from alignment at M-pyrifera_M_contig83766:1..885-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83766.19555.1 ID=mRNA_M-pyrifera_M_contig83766.19555.1|Name=mRNA_M-pyrifera_M_contig83766.19555.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig83766:1..885- (Macrocystis pyrifera P11B4 male)
GAGGCGCACAACGTGCACGTGTGGGAGGTGGGGAGCGGGTCTCGCGTGGC GGCGTTCACGCACCGTTGGCAGGCGGAGGAGAGCTGGCCCGTGAGCTACT CGAGCGACGGGCTGGTGGCGGCAAGGGTGCTGGCAGACGGCGTTGGGGTG TATGCGTCCAAGCTGCTTTCGTCTGCGCCTCGCTGCCACGTGGCGCTGGA GCACGTGCGGCGCGTGTCTCTCTCCCCAGGGCCTCCGCCGTACCGCCTGG CCGTGTTTTGCGCGGCTTCTCGCAGCAAACCCGGGTCAGTGTTGCTTTTC GAGTTTCCCAAAATGTCCGAGCCTCGTGATGCGTTGGCTGCCCAAAGCTT GTTCCAGGCCTCGGATTGTGAGTTCCGATGGAGCCCCGACGGGCAGGCGC TGGTGGCACTGGTGGCCACAGACCGCGCGAGAGACACGTACTATGCTGAG ACTCGGGCGTTCTTCCTCTCGGCCAAGGGCGACTCGTGCGCCGTACCCCA GTCCAAGAAAGGCGCGGTGCATGACGTGCAGTGGAACCCCAGAGGATCGG GTTTCGCCGTCGTCGCTGGCTCTTCGCCCGCCGCCACCACGCTCTTTGAC GCCTCGTGCAAGCCCGTCTTCGACCTCGGCCTCGCCATGCGCAACACGCT CCGCTGGGCACCCCACGGCCGTTTCCTGGCCGTGGCGGGATTCGGGTCTC TGCCAGGCATCGTCGACTTTTGGGACATGGACCGCAAGAAGATCTTGGGC ACGGCAGATGCGGCAGGCACGCACCGCTGCGCATGGTCTCCAGACTCGAG GTGGTTCCTCGCGGCTACCATCACCCCATCCCTCCGCGTCGACAACGGAA TCACACTCTTCCGGTACAATGGCGCAAAAGTCCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83766:1..885-

>mRNA_M-pyrifera_M_contig83766.19555.1 ID=mRNA_M-pyrifera_M_contig83766.19555.1|Name=mRNA_M-pyrifera_M_contig83766.19555.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1770bp|location=Sequence derived from alignment at M-pyrifera_M_contig83766:1..885- (Macrocystis pyrifera P11B4 male)
GAGGCGCACAACGTGCACGTGTGGGAGGTGGGGAGCGGGTCTCGCGTGGC
GGCGTTCACGCACCGTTGGCAGGCGGAGGAGAGCTGGCCCGTGAGCTACT
CGAGCGACGGGCTGGTGGCGGCAAGGGTGCTGGCAGACGGCGTTGGGGTG
TATGCGTCCAAGCTGCTTTCGTCTGCGCCTCGCTGCCACGTGGCGCTGGA
GCACGTGCGGCGCGTGTCTCTCTCCCCAGGGCCTCCGCCGTACCGCCTGG
CCGTGTTTTGCGCGGCTTCTCGCAGCAAACCCGGGTCAGTGTTGCTTTTC
GAGTTTCCCAAAATGTCCGAGCCTCGTGATGCGTTGGCTGCCCAAAGCTT
GTTCCAGGCCTCGGATTGTGAGTTCCGATGGAGCCCCGACGGGCAGGCGC
TGGTGGCACTGGTGGCCACAGACCGCGCGAGAGACACGTACTATGCTGAG
ACTCGGGCGTTCTTCCTCTCGGCCAAGGGCGACTCGTGCGCCGTACCCCA
GTCCAAGAAAGGCGCGGTGCATGACGTGCAGTGGAACCCCAGAGGATCGG
GTTTCGCCGTCGTCGCTGGCTCTTCGCCCGCCGCCACCACGCTCTTTGAC
GCCTCGTGCAAGCCCGTCTTCGACCTCGGCCTCGCCATGCGCAACACGCT
CCGCTGGGCACCCCACGGCCGTTTCCTGGCCGTGGCGGGATTCGGGTCTC
TGCCAGGCATCGTCGACTTTTGGGACATGGACCGCAAGAAGATCTTGGGC
ACGGCAGATGCGGCAGGCACGCACCGCTGCGCATGGTCTCCAGACTCGAG
GTGGTTCCTCGCGGCTACCATCACCCCATCCCTCCGCGTCGACAACGGAA
TCACACTCTTCCGGTACAATGGCGCAAAAGTCCTGGAGGCGCACAACGTG
CACGTGTGGGAGGTGGGGAGCGGGTCTCGCGTGGCGGCGTTCACGCACCG
TTGGCAGGCGGAGGAGAGCTGGCCCGTGAGCTACTCGAGCGACGGGCTGG
TGGCGGCAAGGGTGCTGGCAGACGGCGTTGGGGTGTATGCGTCCAAGCTG
CTTTCGTCTGCGCCTCGCTGCCACGTGGCGCTGGAGCACGTGCGGCGCGT
GTCTCTCTCCCCAGGGCCTCCGCCGTACCGCCTGGCCGTGTTTTGCGCGG
CTTCTCGCAGCAAACCCGGGTCAGTGTTGCTTTTCGAGTTTCCCAAAATG
TCCGAGCCTCGTGATGCGTTGGCTGCCCAAAGCTTGTTCCAGGCCTCGGA
TTGTGAGTTCCGATGGAGCCCCGACGGGCAGGCGCTGGTGGCACTGGTGG
CCACAGACCGCGCGAGAGACACGTACTATGCTGAGACTCGGGCGTTCTTC
CTCTCGGCCAAGGGCGACTCGTGCGCCGTACCCCAGTCCAAGAAAGGCGC
GGTGCATGACGTGCAGTGGAACCCCAGAGGATCGGGTTTCGCCGTCGTCG
CTGGCTCTTCGCCCGCCGCCACCACGCTCTTTGACGCCTCGTGCAAGCCC
GTCTTCGACCTCGGCCTCGCCATGCGCAACACGCTCCGCTGGGCACCCCA
CGGCCGTTTCCTGGCCGTGGCGGGATTCGGGTCTCTGCCAGGCATCGTCG
ACTTTTGGGACATGGACCGCAAGAAGATCTTGGGCACGGCAGATGCGGCA
GGCACGCACCGCTGCGCATGGTCTCCAGACTCGAGGTGGTTCCTCGCGGC
TACCATCACCCCATCCCTCCGCGTCGACAACGGAATCACACTCTTCCGGT
ACAATGGCGCAAAAGTCCTG
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