mRNA_M-pyrifera_M_contig83617.19532.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83617.19532.1
Unique NamemRNA_M-pyrifera_M_contig83617.19532.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: UPI0018896C9F (protein polyglycylase TTLL10 isoform X1 n=2 Tax=Pungitius pungitius TaxID=134920 RepID=UPI0018896C9F)

HSP 1 Score: 97.8 bits (242), Expect = 5.620e-20
Identity = 56/192 (29.17%), Postives = 105/192 (54.69%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPAT-DSIQGQTTRVSYAAFLDYLLEVGYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            +VQHY+ RPLL RG KFD+R Y+L+A    P++  +   GY+R+  DLYD S   N ++H+TN ++Q+++P+Y     D++    +  +Y   + + +  G  R W      +++++++ +   A   ++       +G F L+G D ++D    VWL+E   +PA       L ++  T + E +D+ +E+
Sbjct:  316 IVQHYIQRPLLLRGKKFDVRSYLLIACTA-PYVVFFR-HGYVRLTCDLYDPSS-NNLSSHLTNQYMQKKNPMYSQLKEDTVWSMESLNTYVNDM-FQVAKGLPRDWVLGAFAKRMQQIMTQCFLAVKSKLDCR----LGFFDLIGCDFMVDEDFKVWLLEMNSNPALETNCKVLKEVIPTTVVETLDVTLEI 499          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: A0A8C2ZW21_CYCLU (Tubulin tyrosine ligase-like family, member 10 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2ZW21_CYCLU)

HSP 1 Score: 96.3 bits (238), Expect = 1.800e-19
Identity = 57/191 (29.84%), Postives = 99/191 (51.83%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEVGYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            VVQHY+ RPLL +G KFD+R Y+L+A    P++  +   GY+R+  DLYD S   N +AH+TN  VQ+++PLY    +       R +      + +  G  R W       ++++++ +   A   ++       +G F L+G D ++D    VWL+E   +PA       L ++   ++ E +D+ +E+
Sbjct:  231 VVQHYIQRPLLLKGKKFDVRSYLLIACTA-PYVVFFR-HGYVRLTCDLYDPSS-NNLSAHLTNQCVQKKNPLYSQLKEDTVWSMERFNTYVNESFRVPKGLPRDWVLGAFTMRMQQIMTQCFLAVKSKLDCR----LGFFDLIGCDFMVDEDFKVWLLEMNCNPALHTNCKVLEEVIPGIVVETLDLTLEI 414          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: UPI0018E240EE (protein polyglycylase TTLL10 n=2 Tax=Cyprinodon TaxID=28741 RepID=UPI0018E240EE)

HSP 1 Score: 95.5 bits (236), Expect = 3.290e-19
Identity = 56/191 (29.32%), Postives = 97/191 (50.79%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEVGYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            + QHY+ +PLL  G KFD+R Y+L+A    P++  +   GY+R+  D+YD     N + H+TN +VQ++HPLY    +         +    L + +  G  R W      R++++++ +   A   ++        G F L+G D L+D S  VWL+E T +PA       L ++    + E +D+ +E+
Sbjct:  274 IAQHYIQKPLLLDGRKFDVRSYLLIACTA-PYMVFFR-HGYVRLTCDVYDPIS-NNLSTHLTNQYVQKKHPLYSKLKEDTVWSMESFNTYVNLRFQVAKGLPRDWVLGAFARRMQQIMTQCFFAVKDKLDCRP----GFFDLIGCDFLVDESFKVWLLEMTCNPALNADCEVLKEVIPRTVSETLDLTLEL 457          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: A0A6P7IUZ0_9TELE (inactive polyglycylase TTLL10 n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IUZ0_9TELE)

HSP 1 Score: 95.5 bits (236), Expect = 3.510e-19
Identity = 58/193 (30.05%), Postives = 103/193 (53.37%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEV--GYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            VVQHY+ RPLL  G KFD+R Y+L+A    P++  +   GY+R+  DLYD     N +AH+TN ++Q+++PLY    +         S+ A+++   +V  G  R W      +++++++ +   A   ++    H  +G F L+G D ++D    VWL+E   +PA       L ++    + E +D+ +E+
Sbjct:  320 VVQHYIQRPLLLTGKKFDVRSYLLIACTA-PYMVFFR-HGYVRLTCDLYDPRS-NNLSAHLTNQYMQKKNPLYSQLKEDTVWSME--SFNAYVNDRFQVAKGLPRDWVLGAFAKRMQQIMMQCFFAVKSKL----HCRLGFFDLIGCDFMVDEDFKVWLLEMNCNPALHTNCKVLKEVVPRTVEETLDLTLEI 503          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: A0A6I9MQ21_9TELE (inactive polyglycylase TTLL10 isoform X1 n=11 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9MQ21_9TELE)

HSP 1 Score: 95.5 bits (236), Expect = 3.520e-19
Identity = 54/191 (28.27%), Postives = 100/191 (52.36%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEVGYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            +VQHY+ RPLL +G KFD+R Y+L+A    P++  +   GY+R+  DLYD S   N +AH+TN ++Q+++PLY    +       R +      + +  G    W       ++++++ +   A   ++       +G F L+G D ++D    VWL+E   +PA       L ++  + ++E +D+ +E+
Sbjct:  336 IVQHYIQRPLLLKGKKFDVRSYLLIACTA-PYMVFFR-HGYVRLTCDLYDPSS-NNLSAHLTNQYMQKKNPLYSQLKEDTVWTMERFNTYVNGRFRVAKGLPGDWVMGAFAERMQQIMTQCFLAVKSKLDCR----LGFFDLIGCDFMVDEDFKVWLLEMNCNPALHTNCEVLKEVIPSTVKETLDLTLEI 519          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: UPI001BD4770C (protein polyglycylase TTLL10 isoform X1 n=3 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD4770C)

HSP 1 Score: 95.1 bits (235), Expect = 4.850e-19
Identity = 53/191 (27.75%), Postives = 100/191 (52.36%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEVGYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            ++QHY+ +PLL +G KFD+R Y+L+A    P++  +   GY+R+  DLYD S   N  AH+TN ++Q+++PLY    +       R +      + +  G  R W   +  +++++++     A   ++       +G F L+G D ++D    VWL+E   +PA       L ++  + + E +D+ +E+
Sbjct:  292 IIQHYIQKPLLLKGKKFDVRSYLLIACTA-PYMVFFR-HGYVRLTCDLYDPSS-NNLTAHLTNQYMQKKNPLYSRLKEETVWSMERFNTYVNERFQVAKGLPRDWVLGVFAKRMQQIMTHCFLAVKSKLDCR----LGLFDLIGCDFMVDEEFKVWLLEMNCNPALHTNCDVLKEVIPSTVVETLDLTLEI 475          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: A0A672HDX9_SALFA (Uncharacterized protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HDX9_SALFA)

HSP 1 Score: 94.0 bits (232), Expect = 1.190e-18
Identity = 59/193 (30.57%), Postives = 102/193 (52.85%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEV--GYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            VVQHY+ RPLL  G KFD+R Y+L+A    P++  +   GY+R+  D YD     + ++H+TN ++Q+++PLY    D         S+ AF++   +V  G  R W      R++++++ +   A   ++       +G F L+G D L+D    VWL+E   +PA       L ++    + EA+D+ +E+
Sbjct:  301 VVQHYIQRPLLLNGKKFDVRSYLLIACTA-PYMVFFC-HGYVRLTCDPYDPDS-NDLSSHLTNQYMQKQNPLYSLLKDDTVWSME--SFNAFVNRRFQVSRGLPRDWVLGAFTRRMQQIMSQCFFAVKSKLICR----LGFFDLIGCDFLVDEDFKVWLLEMNCNPALHTNCQVLKEVVPRTVAEALDLTLEI 484          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: A0A671UMK2_SPAAU (Tubulin tyrosine ligase like 10 n=3 Tax=Sparidae TaxID=8169 RepID=A0A671UMK2_SPAAU)

HSP 1 Score: 93.2 bits (230), Expect = 2.240e-18
Identity = 59/196 (30.10%), Postives = 104/196 (53.06%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYL-----LEVGYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            +VQHY+ RPLL +G KFD+R ++L+A    P++  +   GY+R+  DLYD S   N +AH+TN ++Q+++PLY    +      T  S  +F  Y+     +  G  R W      R++++++ +   A   ++       +G F L+G D ++D    VWL+E   +PA       L ++    + EA+D+ +E+
Sbjct:  325 IVQHYIQRPLLLKGKKFDVRSFLLVACTA-PYMVFFC-HGYVRLTCDLYDPSS-KNLSAHLTNQYMQKKNPLYSQLKED-----TVWSMESFNTYVNDRFRVAKGLPRDWVLGTFARRMQQIMTQCFFAVKSKLDRR----LGFFDLIGCDFMVDEDFKVWLLEMNCNPALHTNCEVLKEVIPRTVVEALDLTLEI 508          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: A0A3Q1GFX2_9TELE (Tubulin tyrosine ligase like 10 n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1GFX2_9TELE)

HSP 1 Score: 92.8 bits (229), Expect = 2.890e-18
Identity = 55/193 (28.50%), Postives = 102/193 (52.85%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEVG--YERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            +VQHY+ RPLL  G KFD+R Y+L+A    P++  +   GY+R+  DLYD S   N +AH+TN ++Q+++PLY    +         S+  +++   +V     R W   +  ++++ ++ +   A   ++       +G F L+G D ++D    VWL+E   +PA       L ++  + + E +D+ +E+
Sbjct:  229 IVQHYIQRPLLLNGKKFDVRSYLLIACTA-PYMVFFR-HGYVRLTCDLYDPSS-NNLSAHLTNQYMQKKNPLYSQLKEDTVWSME--SFNTYVNDKFQVAKCLPRDWVLGVFAKRMQHIMTQCFLAVKSKLDCR----LGFFDLIGCDFMVDEDFKVWLLEMNCNPALHTNCEVLKEVIPSTVEETLDLTMEI 412          
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Match: UPI001A995D3C (protein polyglycylase TTLL10 isoform X1 n=4 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A995D3C)

HSP 1 Score: 92.8 bits (229), Expect = 2.940e-18
Identity = 53/191 (27.75%), Postives = 99/191 (51.83%), Query Frame = 1
Query:    1 VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYDGSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEVGYERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLDTSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEV 573
            +VQHY+ RPLL RG KFD+R Y+L+A    P++  +   GY+R+  DLYD S     ++H+TN ++Q+++P+Y    +         +      + +  G  R W      +++++++ +   A   +        +G F L+G D ++D    VWL+E   +PA +     L ++  + + E +DI +E+
Sbjct:  337 IVQHYIQRPLLLRGKKFDVRSYLLIACTA-PYVVFFR-HGYVRLTCDLYDPSS-NKLSSHLTNQYMQKKNPMYSQLKEDTVWSMESFNTYVNDKFQVAKGLPRDWVMGAFAKRMQQIMTQCFLAVKSKFDRR----LGFFELIGCDFMVDEDFKVWLLEMNSNPALQTNCKVLKEVIPSTVVETLDITLEI 520          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83617.19532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0018896C9F5.620e-2029.17protein polyglycylase TTLL10 isoform X1 n=2 Tax=Pu... [more]
A0A8C2ZW21_CYCLU1.800e-1929.84Tubulin tyrosine ligase-like family, member 10 n=2... [more]
UPI0018E240EE3.290e-1929.32protein polyglycylase TTLL10 n=2 Tax=Cyprinodon Ta... [more]
A0A6P7IUZ0_9TELE3.510e-1930.05inactive polyglycylase TTLL10 n=1 Tax=Parambassis ... [more]
A0A6I9MQ21_9TELE3.520e-1928.27inactive polyglycylase TTLL10 isoform X1 n=11 Tax=... [more]
UPI001BD4770C4.850e-1927.75protein polyglycylase TTLL10 isoform X1 n=3 Tax=Ch... [more]
A0A672HDX9_SALFA1.190e-1830.57Uncharacterized protein n=1 Tax=Salarias fasciatus... [more]
A0A671UMK2_SPAAU2.240e-1830.10Tubulin tyrosine ligase like 10 n=3 Tax=Sparidae T... [more]
A0A3Q1GFX2_9TELE2.890e-1828.50Tubulin tyrosine ligase like 10 n=1 Tax=Acanthochr... [more]
UPI001A995D3C2.940e-1827.75protein polyglycylase TTLL10 isoform X1 n=4 Tax=Ga... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83617contigM-pyrifera_M_contig83617:98..886 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score94.4
Seed ortholog evalue7.1e-17
Seed eggNOG ortholog244447.XP_008316845.1
Preferred nameTTLL10
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0015630,GO:0016874,GO:0016879,GO:0016881,GO:0018094,GO:0018193,GO:0018200,GO:0019538,GO:0032838,GO:0036211,GO:0042995,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0070735,GO:0070737,GO:0071704,GO:0097014,GO:0099568,GO:0120025,GO:0120038,GO:0140096,GO:1901564
EggNOG free text desc.Tubulin tyrosine ligase-like family, member 10
EggNOG OGs38GWM@33154,3BA2M@33208,3CTH9@33213,484E1@7711,495XJ@7742,49ZME@7898,KOG2157@1,KOG2157@2759
COG Functional cat.O
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
Exons2
Model size639
Cds size639
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816743.849046-CDS-M-pyrifera_M_contig83617:97..4301622816743.849046-CDS-M-pyrifera_M_contig83617:97..430Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83617 98..430 -
1692278152.3489223-CDS-M-pyrifera_M_contig83617:97..4301692278152.3489223-CDS-M-pyrifera_M_contig83617:97..430Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83617 98..430 -
1622816743.8596187-CDS-M-pyrifera_M_contig83617:580..8861622816743.8596187-CDS-M-pyrifera_M_contig83617:580..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83617 581..886 -
1692278152.3621583-CDS-M-pyrifera_M_contig83617:580..8861692278152.3621583-CDS-M-pyrifera_M_contig83617:580..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83617 581..886 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83617.19532.1prot_M-pyrifera_M_contig83617.19532.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83617 98..886 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83617.19532.1

>prot_M-pyrifera_M_contig83617.19532.1 ID=prot_M-pyrifera_M_contig83617.19532.1|Name=mRNA_M-pyrifera_M_contig83617.19532.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
VVQHYVHRPLLYRGYKFDLRVYVLLASVERPFLALYSTEGYLRVCSDLYD
GSCYGNRNAHVTNFHVQREHPLYDPATDSIQGQTTRVSYAAFLDYLLEVG
YERAWTEHLLHRQIRRVVGKAVAATVGRMQADEHTCVGQFGLLGVDLLLD
TSGHVWLIEFTKSPAFRFQPAFLADLHGTLLREAVDIPIEVEQVRACLPD
VRQDVPLEALSRL
back to top

mRNA from alignment at M-pyrifera_M_contig83617:98..886-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83617.19532.1 ID=mRNA_M-pyrifera_M_contig83617.19532.1|Name=mRNA_M-pyrifera_M_contig83617.19532.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig83617:98..886- (Macrocystis pyrifera P11B4 male)
GTGGTGCAGCACTACGTGCACCGGCCGCTGCTCTACCGCGGCTACAAGTT CGACCTGCGCGTCTACGTGCTGCTGGCCAGCGTGGAGCGGCCCTTCCTGG CCCTCTACTCGACCGAGGGCTACCTGCGCGTCTGCTCCGACCTCTACGAC GGCAGCTGCTACGGCAACCGCAACGCGCACGTCACCAACTTCCACGTCCA GCGCGAGCACCCCCTCTACGACCCCGCCACCGACTCGATCCAGGGCCAGA CCACGCGCGTCTCCTACGCCGCCTTCCTGGACTACCTCCTCGAGGTGGGC TACGAGGTCGCCGCCGTCGAGGCCGGCGCAGAGGGCGAGGCCGAGGCCGA GGGCCTCGCGGCCCACGCGCCGCCGCTGCTGCGCGAGCTCCTGGCCGGCG GCGTGGCGGAGGAGGACCTGGAGCGCGCGTGCAGGGGCGGCGAGGCGGTG CTGCAGCGGGCCTGGACCGAGCACCTGCTGCACCGCCAGATCCGCCGCGT CGTGGGCAAGGCCGTCGCCGCCACGGTCGGCCGCATGCAGGCGGACGAGC ACACCTGCGTGGGCCAGTTCGGCCTCCTCGGCGTCGACCTCCTCCTCGAC ACGTCGGGCCACGTCTGGCTCATCGAGTTCACGAAGAGCCCCGCCTTCCG CTTCCAGCCGGCCTTCCTGGCCGACCTGCACGGCACCCTCCTGCGCGAGG CCGTCGACATTCCCATCGAGGTGGAGCAGGTGCGCGCCTGCCTGCCCGAC GTGCGCCAGGACGTGCCCCTCGAGGCCCTCTCGCGCCTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig83617:98..886-

>mRNA_M-pyrifera_M_contig83617.19532.1 ID=mRNA_M-pyrifera_M_contig83617.19532.1|Name=mRNA_M-pyrifera_M_contig83617.19532.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig83617:98..886- (Macrocystis pyrifera P11B4 male)
GTGGTGCAGCACTACGTGCACCGGCCGCTGCTCTACCGCGGCTACAAGTT
CGACCTGCGCGTCTACGTGCTGCTGGCCAGCGTGGAGCGGCCCTTCCTGG
CCCTCTACTCGACCGAGGGCTACCTGCGCGTCTGCTCCGACCTCTACGAC
GGCAGCTGCTACGGCAACCGCAACGCGCACGTCACCAACTTCCACGTCCA
GCGCGAGCACCCCCTCTACGACCCCGCCACCGACTCGATCCAGGGCCAGA
CCACGCGCGTCTCCTACGCCGCCTTCCTGGACTACCTCCTCGAGGTGGGC
TACGAGGTGGTGCAGCACTACGTGCACCGGCCGCTGCTCTACCGCGGCTA
CAAGTTCGACCTGCGCGTCTACGTGCTGCTGGCCAGCGTGGAGCGGCCCT
TCCTGGCCCTCTACTCGACCGAGGGCTACCTGCGCGTCTGCTCCGACCTC
TACGACGGCAGCTGCTACGGCAACCGCAACGCGCACGTCACCAACTTCCA
CGTCCAGCGCGAGCACCCCCTCTACGACCCCGCCACCGACTCGATCCAGG
GCCAGACCACGCGCGTCTCCTACGCCGCCTTCCTGGACTACCTCCTCGAG
GTGGGCTACGAGCGGGCCTGGACCGAGCACCTGCTGCACCGCCAGATCCG
CCGCGTCGTGGGCAAGGCCGTCGCCGCCACGGTCGGCCGCATGCAGGCGG
ACGAGCACACCTGCGTGGGCCAGTTCGGCCTCCTCGGCGTCGACCTCCTC
CTCGACACGTCGGGCCACGTCTGGCTCATCGAGTTCACGAAGAGCCCCGC
CTTCCGCTTCCAGCCGGCCTTCCTGGCCGACCTGCACGGCACCCTCCTGC
GCGAGGCCGTCGACATTCCCATCGAGGTGGAGCAGGTGCGCGCCTGCCTG
CCCGACGTGCGCCAGGACGTGCCCCTCGAGGCCCTCTCGCGCCTGCGGGC
CTGGACCGAGCACCTGCTGCACCGCCAGATCCGCCGCGTCGTGGGCAAGG
CCGTCGCCGCCACGGTCGGCCGCATGCAGGCGGACGAGCACACCTGCGTG
GGCCAGTTCGGCCTCCTCGGCGTCGACCTCCTCCTCGACACGTCGGGCCA
CGTCTGGCTCATCGAGTTCACGAAGAGCCCCGCCTTCCGCTTCCAGCCGG
CCTTCCTGGCCGACCTGCACGGCACCCTCCTGCGCGAGGCCGTCGACATT
CCCATCGAGGTGGAGCAGGTGCGCGCCTGCCTGCCCGACGTGCGCCAGGA
CGTGCCCCTCGAGGCCCTCTCGCGCCTG
back to top