mRNA_M-pyrifera_M_contig836.19529.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: D7FT16_ECTSI (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT16_ECTSI) HSP 1 Score: 340 bits (872), Expect = 2.560e-102 Identity = 201/351 (57.26%), Postives = 220/351 (62.68%), Query Frame = 1 Query: 1837 KGGVTTAGN---------GGKPQAKPMARFVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVSVTLTTPPLSGRYIGYWRLRTADGQNFGHRIWADVLVTGGTADLVIEGSMDGDWDLVNMQRLSKAVEDTAKDQQNAADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESASAATATPADI--TEAAPEDDDGLAEAIAAIEAASVQPSPLDAGSEEMKSSDG---------------PEEEGEKV----DREAAVGTM--KWHRELCSLAEMGFGDTPRNISLLEKHVTTSGGPGMERVLHELLSWHEVSFQ 2793 +GG T AG G K AKPMARFVTDVSV+DGSPLPPNTRFVKTWCMRNDG VTFP GC+++PV GDLMAGPEDGVAVEQR PGEEFHVSV LTTPPLSGRYIGYWRLRTA+GQ FGHR+WADVLVTGGTADLV EG++DGDWDLVNMQRLSKAVEDT KD AA +A+ P +I T P G A A+ +A S D G EE KS PE++ V + TM KWHRELCSLAEMGF +T RN+ LLEKHV SG PGMERVLHELLSW EVS Q Sbjct: 269 EGGATAAGKPSRNSGDTGGNKSSAKPMARFVTDVSVADGSPLPPNTRFVKTWCMRNDGPVTFPSGCKIVPVGGDLMAGPEDGVAVEQRGPGEEFHVSVPLTTPPLSGRYIGYWRLRTAEGQKFGHRVWADVLVTGGTADLVDEGTVDGDWDLVNMQRLSKAVEDTGKDDAAAA----------------------------------AAAVEPTAPENIPSTVQTPSYAPGQAWDPASAKAQDAD-SGADRGFEESKSXXXXXXXXXXXXSVADPLPEQQAAPVVVAPSAPSVPPTMATKWHRELCSLAEMGFENTQRNVQLLEKHVVNSGSPGMERVLHELLSWREVSIQ 584
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: A0A6H5JHM7_9PHAE (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM7_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.020e-35 Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 1 Query: 1897 FVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVS-VTLTTPPLSGR 2133 FVTDVSV+DGSPLPPNTRFVKTWCMRNDG VTFP GC+++PV GDLMAGPEDGVA+EQR PGEEFHVS VT T P++GR Sbjct: 44 FVTDVSVADGSPLPPNTRFVKTWCMRNDGPVTFPAGCKIVPVGGDLMAGPEDGVAIEQRGPGEEFHVSNVTSATGPITGR 123
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: A0A7S3XSC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSC8_HETAK) HSP 1 Score: 128 bits (321), Expect = 1.820e-28 Identity = 61/114 (53.51%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 1882 KPMARFVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVSVTLTTPPLSGRYIGYWRLRTADGQNFGHRIWADVLVTGGTA 2223 KPMARFV DV++ DG+ + P F KTW MRNDGAV FP G RL+ V GDLM G V PGEEF + + L P GRYIGYWRL+ +G +FGHR+W DV V G + Sbjct: 87 KPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 198
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: A0A6S9FPI1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FPI1_HETAK) HSP 1 Score: 128 bits (321), Expect = 2.870e-27 Identity = 61/114 (53.51%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 1882 KPMARFVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVSVTLTTPPLSGRYIGYWRLRTADGQNFGHRIWADVLVTGGTA 2223 KPMARFV DV++ DG+ + P F KTW MRNDGAV FP G RL+ V GDLM G V PGEEF + + L P GRYIGYWRL+ +G +FGHR+W DV V G + Sbjct: 268 KPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 379
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: A0A6H5JI15_9PHAE (ZZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI15_9PHAE) HSP 1 Score: 129 bits (325), Expect = 4.550e-27 Identity = 301/810 (37.16%), Postives = 348/810 (42.96%), Query Frame = 1 Query: 1 AELRRLGFSFDNSMVARGRFGG--QVQAEGYHLALCKFLLRSLHDLYPDLPVAQFSELVVFSVKDEDGDMVRFESEEEFVAALPDYESWKTCLRVEATVVKPVVAPSPRNPTTXXXXXXXXIDDPASPSAATITTALGSIGVLPAVSTASFVGGGGAGRGEPAP-SESGSTISFVSNMSSSALSGSGLSXXXXXXXXXXXXXXXXXXXXXXVT----ANREGSSAPPSVCGTEGSAAXXXXXXXXXXXXXXXXXXXXXN--------------------------------PSAAPAGVNDTGSGPGPDAATPAKAFLTQVLPGLADVLARSIYAAQW----------------------------------------------------------------------------------VPEM-----------------------------------MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESYAAGQAWRARRDPQHGGWGEGRRNTARWMRDVARHQHHQQQIGGAPSSGIGCFPTGVEVVRNGMGGAV------WRGPRMQRRNINVPAAGLSWAAAGSGKDPETKPAPAEKMEAASGSAEGTQEGSAPAADPATATESPVEHDGAGVGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------TSDYQDMLAASMRSLASSMTASLPT---SSGAQDGGK--GKGGVTTAGNGG-KPQAKPMARF 1899 +ELRRL F +D+S + GG Q +GYHL+LCKFLLRSL LYP+LPV +FSEL VF+ DGDMVRF+SEEEFVAA+ Y+SW+ CLRVE T +KP SPR P DP P++ A L A++++ +P P SE+ S +SFVSNMS S XXXXXXXXXXXXXXXXXXXX R ++ P++ +AA XXXXXXXXXXXXXXXX P AAPAG GPG TPA+AFLTQVLPGLADVLARSIYAA PE+ XXXXXXXXXXXXX ++A GQ WR R +PQHGGWGEGRR RWMRD+AR Q QQQ A +SG+G P GVEVVR G GG V W GPRMQRR + PA G P+ K A+ +A TQ P P + D A V A XXXXXXXXXXXXXXXXXX XXXXXXXXX + +Y DMLAASMRSLASSMTAS P+ S AQ+GG GK + GG K AKPMAR+ Sbjct: 19 SELRRLAFGYDDSFQ-QASSGGLFDEQRQGYHLSLCKFLLRSLGGLYPNLPVGKFSELAVFT----DGDMVRFDSEEEFVAAM-SYKSWEGCLRVEVTALKP----SPRPPAA----------DP-EPASVADAAAXXXSDELAAIASS-----------DPTPMSETASVMSFVSNMSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSEDAPPVARSLAAPVPALAPPVDTAAAVEAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSSLPPAAPAGFG----GPG----TPARAFLTQVLPGLADVLARSIYAANRGSDGVPNTSPASASEGGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPEVPRTVQPPSAPTPXXXXXXXXXXXXXXVVHHGVKCDACDVCPIIGTRYKCAVRADFDLCEECERAPVGQGSPFPFLKIRTPTQAPAAIVCLLKHDQPGTAQEAAAXXXXXXXXXXXXXDTPGSNNGGRRTFAPGQGWRCRSNPQHGGWGEGRRKGHRWMRDLARRQ--QQQFERA-ASGMGPVPPGVEVVR-GNGGGVGCNRQPWCGPRMQRRRDDDPATXXXXXXXX-GVAPK-------KDALAALAASLTQLFPTP---PPVGFAEKSDADNAAVAAXXXXXXXXXXXXXXXXXXXVEEPAETAXXXXXXXXXXXXXXXXPPSGEYHDMLAASMRSLASSMTASFPSPGSGSSAQEGGATAGKPSRNSGDTGGNKSSAKPMARY 773
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: A0A7S4D636_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D636_HETAK) HSP 1 Score: 128 bits (321), Expect = 1.150e-26 Identity = 61/114 (53.51%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 1882 KPMARFVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVSVTLTTPPLSGRYIGYWRLRTADGQNFGHRIWADVLVTGGTA 2223 KPMARFV DV++ DG+ + P F KTW MRNDGAV FP G RL+ V GDLM G V PGEEF + + L P GRYIGYWRL+ +G +FGHR+W DV V G + Sbjct: 477 KPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 588
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: A0A485LEZ8_9STRA (Aste57867_20135 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEZ8_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.840e-21 Identity = 54/112 (48.21%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 1879 AKPMARFVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVSVTLTTPPLSGRYIGYWRLRTADGQNFGHRIWADVLVTG 2214 +KP A FV DVS DGS + FVKTW ++NDG +P RL+ V GD + ED V+V PG+ VSV + P RY GYWRL TADG+ +GHR+W D+LV G Sbjct: 345 SKPSASFVGDVSFPDGSTIRAGDTFVKTWRLKNDGKTRWPAKSRLVCVGGDHLEVGEDSVSVPILLPGKMIDVSVDMQAPIKPARYTGYWRLCTADGKRYGHRLWVDILVVG 456
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: A0A6G0WW99_9STRA (UBA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW99_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.390e-21 Identity = 54/111 (48.65%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 1882 KPMARFVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVSVTLTTPPLSGRYIGYWRLRTADGQNFGHRIWADVLVTG 2214 KP A FV DVS DGS + FVKTW ++NDG +P RL+ V GD + ED V+V PG+ VSV + P + RY GYWRL TADG+ +GHR+W D+LV G Sbjct: 345 KPSAGFVGDVSFPDGSTIRAGDTFVKTWRLKNDGKTRWPAKSRLVCVGGDHLEVGEDFVSVPIVPPGKMIDVSVEMRAPNKAARYTGYWRLCTADGKRYGHRLWVDILVVG 455
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: D3B745_POLPP (ZZ-type zinc finger-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B745_POLPP) HSP 1 Score: 105 bits (263), Expect = 6.290e-20 Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 1882 KPMARFVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVSVTLTTPPLSGRYIGYWRLRTADGQNFGHRIWADVLV 2208 K +AR+V+D++V DGS PN F K W +RNDG +P L+ SGD + P DG+ V+ PG++ V + LTTP GRYIGYW+L T +G FG R++ D+ V Sbjct: 288 KHLARYVSDITVKDGSVFGPNVPFTKIWRIRNDGREAWPENSTLVWSSGDRLGSP-DGITVDPVLPGQDIDVGLNLTTPSAPGRYIGYWKLVTPEGLGFGQRLYVDIFV 395
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Match: F4PSP5_CAVFA (ZZ-type zinc finger-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PSP5_CAVFA) HSP 1 Score: 105 bits (262), Expect = 9.680e-20 Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 1888 MARFVTDVSVSDGSPLPPNTRFVKTWCMRNDGAVTFPVGCRLMPVSGDLMAGPEDGVAVEQRAPGEEFHVSVTLTTPPLSGRYIGYWRLRTADGQNFGHRIWADVLVTGGTADLVIE 2238 ++R+V+D++ DGS L P F K W +RNDG +P L VSGD M+ P DGV VE PG + V++ L P GRYIGYW+L T +G +G R++ADV V G ++ +E Sbjct: 324 LSRYVSDMATKDGSLLTPGQGFTKIWRLRNDGNQQWPENTTLSFVSGDRMSSP-DGVTVEPALPGNDVDVAINLVAPSTPGRYIGYWKLFTPEGNAYGQRLFADVYVEGKKEEVAVE 439 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig836.19529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig836.19529.1 >prot_M-pyrifera_M_contig836.19529.1 ID=prot_M-pyrifera_M_contig836.19529.1|Name=mRNA_M-pyrifera_M_contig836.19529.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=932bp AELRRLGFSFDNSMVARGRFGGQVQAEGYHLALCKFLLRSLHDLYPDLPVback to top mRNA from alignment at M-pyrifera_M_contig836:26906..32193- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig836.19529.1 ID=mRNA_M-pyrifera_M_contig836.19529.1|Name=mRNA_M-pyrifera_M_contig836.19529.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5288bp|location=Sequence derived from alignment at M-pyrifera_M_contig836:26906..32193- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig836:26906..32193- >mRNA_M-pyrifera_M_contig836.19529.1 ID=mRNA_M-pyrifera_M_contig836.19529.1|Name=mRNA_M-pyrifera_M_contig836.19529.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5592bp|location=Sequence derived from alignment at M-pyrifera_M_contig836:26906..32193- (Macrocystis pyrifera P11B4 male)back to top |