mRNA_M-pyrifera_M_contig83447.19488.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83447.19488.1
Unique NamemRNA_M-pyrifera_M_contig83447.19488.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A2E7KCV1_9PLAN (DUF58 domain-containing protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KCV1_9PLAN)

HSP 1 Score: 517 bits (1331), Expect = 5.290e-182
Identity = 254/262 (96.95%), Postives = 258/262 (98.47%), Query Frame = 1
Query:    1 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQRAHYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASPLPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPRCECEPWLHLDSPEESRQKVFTDSWKKACYAG 786
            YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRF SHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQ+AAV ALRVIPDL R+HYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLE SVRKHAASPLPEFIVTN+SGFAQRVNQGANRLRSR+IVVQDAPARQSGKEPRCECEPWLHLDSPEESRQKVFTDSWKKACYAG
Sbjct:  167 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFTSHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQSAAVSALRVIPDLHRSHYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLENSVRKHAASPLPEFIVTNNSGFAQRVNQGANRLRSRLIVVQDAPARQSGKEPRCECEPWLHLDSPEESRQKVFTDSWKKACYAG 428          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A517XFB9_9PLAN (DUF58 domain-containing protein n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517XFB9_9PLAN)

HSP 1 Score: 416 bits (1069), Expect = 3.430e-142
Identity = 201/261 (77.01%), Postives = 225/261 (86.21%), Query Frame = 1
Query:    1 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQRAHYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASPLPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPRCECEPWLHLDSPEESRQKVFTDSWKKACYA 783
            YST TAFLET FPFGLYKKKI L++DSVLIVWPEISKLAFMPELREV+SSEDRF SHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDL ++HY++GN  SLEAVIRITASICHSLL+QHA VECLVG+QLFRC+GNQRD  KLLD LA +P  GL  +  KH  SPLPEFI+TN+SG+AQRV  G++R  SR+I+VQD P ++S     C CEPW+ LD+PEESR+  F DSWKKACYA
Sbjct:  167 YSTKTAFLETGFPFGLYKKKISLSMDSVLIVWPEISKLAFMPELREVSSSEDRFTSHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLNQSHYQNGNQQSLEAVIRITASICHSLLSQHACVECLVGNQLFRCEGNQRDQFKLLDALACLPTDGLPATECKHVKSPLPEFIITNTSGYAQRVKSGSSRHHSRIIMVQDTPLQESSNSSDCPCEPWMRLDTPEESRETKFVDSWKKACYA 427          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A350KHC3_9PLAN (DUF58 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KHC3_9PLAN)

HSP 1 Score: 413 bits (1062), Expect = 3.960e-141
Identity = 198/261 (75.86%), Postives = 228/261 (87.36%), Query Frame = 1
Query:    1 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQRAHYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASPLPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPRCECEPWLHLDSPEESRQKVFTDSWKKACYA 783
            YSTSTAFLETAFPFGLYKKKI L++DSVLIVWPEISKLAFMPELREV+SSEDRFASHRAGDYGDVIGTR FRLGDSLRRVHWSQSARQGQ+IVTERQAAAVCALRVIPDL ++HY++GN DSLEA+IRITASICHSLL QHA +ECLVG+QLFRC+GNQRD   LLDELA IP  GL  S  KH  SPLPEF++TNS G+ +++   ++  RSR IVVQD+P ++   +P C+CEPW+ L++P+ESR+K FTDSWKKACYA
Sbjct:  167 YSTSTAFLETAFPFGLYKKKISLSMDSVLIVWPEISKLAFMPELREVSSSEDRFASHRAGDYGDVIGTRTFRLGDSLRRVHWSQSARQGQIIVTERQAAAVCALRVIPDLNQSHYQNGNRDSLEAIIRITASICHSLLKQHACIECLVGNQLFRCEGNQRDQNLLLDELACIPADGLPDSEVKHTRSPLPEFVITNSRGYIKQLQNNSSPHRSRSIVVQDSPTQEIEHDPICQCEPWMRLNTPDESREKAFTDSWKKACYA 427          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A2D5GYX1_9PLAN (DUF58 domain-containing protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2D5GYX1_9PLAN)

HSP 1 Score: 396 bits (1018), Expect = 1.870e-134
Identity = 196/261 (75.10%), Postives = 221/261 (84.67%), Query Frame = 1
Query:    1 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQRAHYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASPLPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPRCECEPWLHLDSPEESRQKVFTDSWKKACYA 783
            YSTSTAFLETAFPFGLYKKKI L++DSVLIVWPEISKLAFMPELREV+SSEDRFASHRAGDYGDVIGTR FRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDL ++HY++ + +SLEAVIRITASIC SLL QHA VECL+G+QLFRC+GN RD  KLLDELA IP  GL  +  K   S LPEFIVTNSSG+ +++  G+   RSR IVVQD P ++S  +  C+CEPW+ L+ P+ESR K F DSWKKACYA
Sbjct:  167 YSTSTAFLETAFPFGLYKKKISLSMDSVLIVWPEISKLAFMPELREVSSSEDRFASHRAGDYGDVIGTRTFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLNQSHYQNNSSESLEAVIRITASICDSLLKQHACVECLIGNQLFRCEGNLRDHYKLLDELACIPANGLPSAEVKPVKSALPEFIVTNSSGYLKQMQIGSLTHRSRSIVVQDPPLQESDHDSVCQCEPWMRLNHPDESRDKTFADSWKKACYA 427          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A517X2W8_9PLAN (DUF58 domain-containing protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X2W8_9PLAN)

HSP 1 Score: 317 bits (811), Expect = 1.190e-103
Identity = 159/263 (60.46%), Postives = 194/263 (73.76%), Query Frame = 1
Query:    1 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQRAHY--RHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASPLPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPRCECEPWLHLDSPEESRQKVFTDSWKKACYA 783
            YST TAFLETAFPFGLY+KK  L+V+S LIVWPE+  L  MPE+REV SSEDRFAS+R GD+GDV GTR FR+GDSLRRVHW+Q+ARQGQMIVTERQAA+VCALRVIPDL  + Y  +  +  +LEAV+RITASIC SL  QHA VECLVGD+LFRC+ +  +L+KL D LA +P  G+  S   H  S L + +VT S G+ + ++    +   R+IVV D   ++      C+CEPWL L+ PEESR KVF D WKKACYA
Sbjct:  126 YSTQTAFLETAFPFGLYRKKRELSVESKLIVWPEVQTLTSMPEIREVNSSEDRFASNRVGDFGDVTGTREFRIGDSLRRVHWAQTARQGQMIVTERQAASVCALRVIPDLNPSSYGTKAEHRAALEAVLRITASICESLHQQHAWVECLVGDKLFRCENDSYELRKLFDALAHVPVEGVNDSALHHKVSSLSQIVVTTSRGYEKHLSFRHAQHNQRIIVVHDHFEQEMEAASSCQCEPWLKLNDPEESRNKVFVDRWKKACYA 388          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A7C4QPR7_9PLAN (DUF58 domain-containing protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4QPR7_9PLAN)

HSP 1 Score: 183 bits (465), Expect = 4.630e-51
Identity = 110/272 (40.44%), Postives = 154/272 (56.62%), Query Frame = 1
Query:    1 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQ-RAHYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIP---------NGGLEYSVRKHAASPLPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDA--PARQSGKE-PRCECEPWLHLDSPEESRQKVFTDSWKKAC 777
            Y     ++ETAFPFGLY  + PLA  + L+VWP  + L  +P+  E+ + ED  +  RAGD GDV+GTR FR GDSLRRVHW+QSARQG++IV ERQ    CA+R++ DL  R+H   G++ SLE ++R  ASI  S+  QHA VEC+VG           DL++ LD LA+IP         +GG   +  +H A  L E+++T + GFA   ++         IVV  A  P     ++   C C PWL L + ++         W++AC
Sbjct:  184 YPRHPPWVETAFPFGLYSARKPLAEWNTLVVWPASTTLHTLPDAAEIEAREDHTSDRRAGDVGDVLGTRWFRQGDSLRRVHWAQSARQGRLIVCERQQPVSCAMRLVLDLDPRSHGGEGSEASLERLLRTAASIIESMHAQHAVVECVVGRTCHVVRSPASDLKRCLDALAAIPAEGLADCAEHGGCCAAGLRHRA--LSEYVLTTAKGFAALRHRRHWSANHHFIVVGAAATPMPDGCRDHEHCGCRPWLELSAADDVLT-ALPRRWERAC 452          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A517QYD5_9BACT (DUF58 domain-containing protein n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517QYD5_9BACT)

HSP 1 Score: 175 bits (444), Expect = 2.180e-48
Identity = 105/265 (39.62%), Postives = 145/265 (54.72%), Query Frame = 1
Query:    1 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQRAHYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASP----LPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPRCECEPWLHLDSPEESRQKVFTDSWKKACYA 783
            Y      +E+AFPFG +  +  +  D  LIVWP  S L+ +P+   V S ++  +  RAGD+GD++GTR FR GDSLRRVHW+Q+AR G +I  ERQA AV A+RVI DL R  +  G +  LEA IR+ AS+C  L  QHA VEC +  +L R   N   L+ +LD LA++P  G +  V   + S     L   +  NS   A    +GA     R+I V D P   + + P      WL +   + SR     D W++AC+A
Sbjct:  163 YPLEPPTIESAFPFGFWTCRKTIECDR-LIVWPTSSPLSNLPDSAAVDSHDETLSDRRAGDFGDLLGTRRFRDGDSLRRVHWAQTARHGHLIFCERQAGAVAAIRVIADLSRDAFA-GREGDLEAAIRVVASLCEYLPQQHALVECRLNGELIRIGSNASGLRDILDRLAAVPREGFDTVVAAKSESNTEGLLTLLVTGNSDNSASGTCRGA-----RVIAVGDEPPVITSRRP------WLRVSPADLSR---LGDIWRRACHA 411          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A517Z6B3_9PLAN (DUF58 domain-containing protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z6B3_9PLAN)

HSP 1 Score: 173 bits (439), Expect = 1.580e-47
Identity = 101/274 (36.86%), Postives = 149/274 (54.38%), Query Frame = 1
Query:    1 YSTSTAFLETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQRAHYRHGN-DDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIP-----NGGLEYSV---RKHAASPLPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPR-----CECEPWLHLDSPEESRQKVFTDSWKKACY 780
            + T    ++T FPFGL   + P+ V   L+VWP   +L  MP+  E+   EDR    RAGD GD +GTRAFR GDSLRRVHW Q+AR G+MIVTER+A   CA+++  D   + +R  N   SLE V+ + ASI  SL  QHA ++ ++G Q F       DL++ LD +A +P     +GG E ++    +H ++      VT      Q V       R+R +VV+   A  SG+        C+C  W+ L + +   + +  +SW++AC+
Sbjct:  155 FPTERPQIDTGFPFGLIHARAPVDVTGELVVWPRSIRLDAMPDTVEIRGREDRLTDRRAGDLGDFLGTRAFRDGDSLRRVHWGQTARFGRMIVTEREAPVACAVQLRIDTAASVHRIANGSSSLERVLTVAASILESLHRQHARIDVVMGTQTFAAGSGSGDLRRCLDAIARVPEAGDPSGGSECTLDRLSRHTST----IAVTTDLALRQHVAHQHRSSRARYVVVR-TDAGSSGRSAEKTVEGCDCHAWVELAAGDPV-EMILPESWRRACH 422          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A5C5VPG3_9PLAN (DUF58 domain-containing protein n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5VPG3_9PLAN)

HSP 1 Score: 171 bits (434), Expect = 8.210e-47
Identity = 98/260 (37.69%), Postives = 141/260 (54.23%), Query Frame = 1
Query:   22 LETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQRA-HYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASP---LPEFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPR---CECEPWLHLDSPEESRQKVFTDSWKKACY 780
            ++TAFPFG+++  +P+ + S L+VWPE   L  MP++ E+ + ED+    R GD G++IG R +R GDSLR+VHW Q+AR G +IV ERQ+ A CA+R++ D+  + H  H   +SLE  + I ASI  SL   HA VE  V +QL     +  DL++ LD LA +P  G+      H   P   LP  +VT                  R IVV+     +    P+   C+C  WL + S +  R  V  D W+KAC+
Sbjct:  162 VDTAFPFGIWQAFVPIELKSELVVWPESVSLDAMPDIVEIQTREDKLTDRRCGDTGEMIGIRPYREGDSLRQVHWIQTARTGNLIVMERQSPATCAVRLLVDVDHSRHSFHPARNSLEQTLSIAASILESLHRNHAFVELQVHEQLIPIGNSFGDLRRGLDALARVPADGVRCDHACHFDHPTRCLPTIVVTTDLALHHHRTHPHVSRGERYIVVKANDEEKDASLPKQEDCDCHSWLDISSNDVLRD-VLPDRWRKACH 420          
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Match: A0A142WTZ6_9PLAN (DUF58 domain-containing protein n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WTZ6_9PLAN)

HSP 1 Score: 169 bits (429), Expect = 4.740e-46
Identity = 97/263 (36.88%), Postives = 139/263 (52.85%), Query Frame = 1
Query:   22 LETAFPFGLYKKKIPLAVDSVLIVWPEISKLAFMPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQMIVTERQAAAVCALRVIPDLQR-AHYRHGNDDSLEAVIRITASICHSLLNQHASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASPLPE-------FIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEP--RCECEPWLHLDSPEESRQKVFTDSWKKACY 780
            ++T FPFGL     P+ V   L+VWP   +L  MP+  E+ + E+RFA  R GD GD++GTR FR GD+LRRVHW Q+AR G++IVTERQA A CA+R+I D    +H  +    +LE+++   ASI   L  QHA VE +VG + F       DL++ LD LA +P  G+   +   A   L           +T    FA+ +       + R ++V     R     P   C+C  WL L S  E   +V    W+++C+
Sbjct:  162 VDTGFPFGLLHCFAPVNVRGELLVWPASVRLDGMPDAAEIQTREERFADRRIGDAGDILGTRPFREGDALRRVHWRQTARYGRLIVTERQAPAACAMRLIVDASAPSHTGNTGRATLESLLSTAASILEGLHRQHALVEVVVGSETFLVGAAANDLRRALDALARVPVSGIADHLPHGAPCALDRRTRLVTSMTITTDCAFARHLAHRHGGSQERYVLVHGGDCRHQHGHPVAGCDCHSWLDL-SANEPLDEVLPGRWRRSCH 423          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83447.19488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KCV1_9PLAN5.290e-18296.95DUF58 domain-containing protein n=6 Tax=Gimesia Ta... [more]
A0A517XFB9_9PLAN3.430e-14277.01DUF58 domain-containing protein n=1 Tax=Gimesia ma... [more]
A0A350KHC3_9PLAN3.960e-14175.86DUF58 domain-containing protein n=1 Tax=Planctomyc... [more]
A0A2D5GYX1_9PLAN1.870e-13475.10DUF58 domain-containing protein n=3 Tax=Gimesia Ta... [more]
A0A517X2W8_9PLAN1.190e-10360.46DUF58 domain-containing protein n=2 Tax=Gimesia aq... [more]
A0A7C4QPR7_9PLAN4.630e-5140.44DUF58 domain-containing protein n=1 Tax=Schlesneri... [more]
A0A517QYD5_9BACT2.180e-4839.62DUF58 domain-containing protein n=1 Tax=Planctomyc... [more]
A0A517Z6B3_9PLAN1.580e-4736.86DUF58 domain-containing protein n=1 Tax=Maioricimo... [more]
A0A5C5VPG3_9PLAN8.210e-4737.69DUF58 domain-containing protein n=1 Tax=Thalassogl... [more]
A0A142WTZ6_9PLAN4.740e-4636.88DUF58 domain-containing protein n=1 Tax=Planctomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83447contigM-pyrifera_M_contig83447:3..894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score329.3
Seed ortholog evalue1.4e-87
Seed eggNOG ortholog344747.PM8797T_23114
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein (some members contain a von Willebrand factor type A (vWA) domain)
EggNOG OGs2IZI6@203682,COG1721@1,COG1721@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size892
Cds size669
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83447.19488.1prot_M-pyrifera_M_contig83447.19488.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83447 123..791 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816741.4630058-UTR-M-pyrifera_M_contig83447:2..1221622816741.4630058-UTR-M-pyrifera_M_contig83447:2..122Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83447 3..122 +
1692278150.8324728-UTR-M-pyrifera_M_contig83447:2..1221692278150.8324728-UTR-M-pyrifera_M_contig83447:2..122Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83447 3..122 +
1622816741.4880695-UTR-M-pyrifera_M_contig83447:791..8941622816741.4880695-UTR-M-pyrifera_M_contig83447:791..894Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83447 792..894 +
1692278150.8600147-UTR-M-pyrifera_M_contig83447:791..8941692278150.8600147-UTR-M-pyrifera_M_contig83447:791..894Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83447 792..894 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816741.4743404-CDS-M-pyrifera_M_contig83447:122..7911622816741.4743404-CDS-M-pyrifera_M_contig83447:122..791Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83447 123..791 +
1692278150.8481603-CDS-M-pyrifera_M_contig83447:122..7911692278150.8481603-CDS-M-pyrifera_M_contig83447:122..791Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83447 123..791 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83447.19488.1

>prot_M-pyrifera_M_contig83447.19488.1 ID=prot_M-pyrifera_M_contig83447.19488.1|Name=mRNA_M-pyrifera_M_contig83447.19488.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp
MPELREVTSSEDRFASHRAGDYGDVIGTRAFRLGDSLRRVHWSQSARQGQ
MIVTERQAAAVCALRVIPDLQRAHYRHGNDDSLEAVIRITASICHSLLNQ
HASVECLVGDQLFRCDGNQRDLQKLLDELASIPNGGLEYSVRKHAASPLP
EFIVTNSSGFAQRVNQGANRLRSRMIVVQDAPARQSGKEPRCECEPWLHL
DSPEESRQKVFTDSWKKACYAG*
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mRNA from alignment at M-pyrifera_M_contig83447:3..894+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83447.19488.1 ID=mRNA_M-pyrifera_M_contig83447.19488.1|Name=mRNA_M-pyrifera_M_contig83447.19488.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=892bp|location=Sequence derived from alignment at M-pyrifera_M_contig83447:3..894+ (Macrocystis pyrifera P11B4 male)
TATTCAACCAGCACTGCTTTCCTGGAGACTGCCTTCCCGTTCGGGTTATA TAAGAAGAAGATTCCTCTAGCCGTCGATTCCGTATTGATCGTCTGGCCGG AGATCTCCAAGCTGGCCTTTATGCCTGAGTTGAGAGAGGTCACTTCCAGC GAAGACCGCTTTGCTTCGCATCGTGCGGGTGATTACGGTGATGTGATTGG CACCCGCGCTTTCCGACTGGGCGACTCCCTGCGGCGCGTGCACTGGTCGC AATCCGCCAGACAGGGCCAGATGATTGTCACCGAACGCCAGGCAGCGGCG GTTTGTGCTCTGCGTGTGATTCCTGATCTCCAGAGAGCGCATTACCGGCA TGGTAATGACGATTCCCTGGAAGCGGTGATTCGCATCACAGCCAGTATCT GTCACTCACTGTTAAATCAGCATGCTTCAGTGGAATGCCTCGTGGGCGAC CAGTTGTTTCGCTGCGATGGAAATCAGAGAGACCTGCAGAAACTGCTCGA TGAACTGGCTTCCATCCCCAACGGGGGACTCGAGTATTCCGTACGAAAGC ACGCTGCTTCTCCCCTGCCTGAATTCATTGTTACGAACAGCAGTGGCTTC GCGCAACGGGTCAATCAGGGAGCGAACCGTCTTCGTTCACGGATGATCGT CGTTCAGGATGCCCCTGCCCGTCAATCGGGGAAAGAACCGAGGTGCGAAT GCGAACCCTGGTTACACCTGGACAGCCCGGAAGAGAGTCGCCAAAAAGTA TTTACCGACAGTTGGAAGAAAGCGTGCTATGCAGGCTGAACGAACCAAAT CTGTGGAGAGCCGGATCCTGCATTACGTCAGCATCGCGATGGTCCTGACG GGGGCATTAGCGCTCTGTATTTCTGACTCTCATGGCAGATAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83447:3..894+

>mRNA_M-pyrifera_M_contig83447.19488.1 ID=mRNA_M-pyrifera_M_contig83447.19488.1|Name=mRNA_M-pyrifera_M_contig83447.19488.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig83447:3..894+ (Macrocystis pyrifera P11B4 male)
ATGCCTGAGTTGAGAGAGGTCACTTCCAGCGAAGACCGCTTTGCTTCGCA
TCGTGCGGGTGATTACGGTGATGTGATTGGCACCCGCGCTTTCCGACTGG
GCGACTCCCTGCGGCGCGTGCACTGGTCGCAATCCGCCAGACAGGGCCAG
ATGATTGTCACCGAACGCCAGGCAGCGGCGGTTTGTGCTCTGCGTGTGAT
TCCTGATCTCCAGAGAGCGCATTACCGGCATGGTAATGACGATTCCCTGG
AAGCGGTGATTCGCATCACAGCCAGTATCTGTCACTCACTGTTAAATCAG
CATGCTTCAGTGGAATGCCTCGTGGGCGACCAGTTGTTTCGCTGCGATGG
AAATCAGAGAGACCTGCAGAAACTGCTCGATGAACTGGCTTCCATCCCCA
ACGGGGGACTCGAGTATTCCGTACGAAAGCACGCTGCTTCTCCCCTGCCT
GAATTCATTGTTACGAACAGCAGTGGCTTCGCGCAACGGGTCAATCAGGG
AGCGAACCGTCTTCGTTCACGGATGATCGTCGTTCAGGATGCCCCTGCCC
GTCAATCGGGGAAAGAACCGAGGTGCGAATGCGAACCCTGGTTACACCTG
GACAGCCCGGAAGAGAGTCGCCAAAAAGTATTTACCGACAGTTGGAAGAA
AGCGTGCTATGCAGGCTGAATGCCTGAGTTGAGAGAGGTCACTTCCAGCG
AAGACCGCTTTGCTTCGCATCGTGCGGGTGATTACGGTGATGTGATTGGC
ACCCGCGCTTTCCGACTGGGCGACTCCCTGCGGCGCGTGCACTGGTCGCA
ATCCGCCAGACAGGGCCAGATGATTGTCACCGAACGCCAGGCAGCGGCGG
TTTGTGCTCTGCGTGTGATTCCTGATCTCCAGAGAGCGCATTACCGGCAT
GGTAATGACGATTCCCTGGAAGCGGTGATTCGCATCACAGCCAGTATCTG
TCACTCACTGTTAAATCAGCATGCTTCAGTGGAATGCCTCGTGGGCGACC
AGTTGTTTCGCTGCGATGGAAATCAGAGAGACCTGCAGAAACTGCTCGAT
GAACTGGCTTCCATCCCCAACGGGGGACTCGAGTATTCCGTACGAAAGCA
CGCTGCTTCTCCCCTGCCTGAATTCATTGTTACGAACAGCAGTGGCTTCG
CGCAACGGGTCAATCAGGGAGCGAACCGTCTTCGTTCACGGATGATCGTC
GTTCAGGATGCCCCTGCCCGTCAATCGGGGAAAGAACCGAGGTGCGAATG
CGAACCCTGGTTACACCTGGACAGCCCGGAAGAGAGTCGCCAAAAAGTAT
TTACCGACAGTTGGAAGAAAGCGTGCTATGCAGGCTGA
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