mRNA_M-pyrifera_M_contig83441.19485.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83441.19485.1
Unique NamemRNA_M-pyrifera_M_contig83441.19485.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: A0A2D8LVD1_9ACTN (Type VI secretion system ATPase TssH n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LVD1_9ACTN)

HSP 1 Score: 499 bits (1286), Expect = 4.060e-169
Identity = 260/298 (87.25%), Postives = 287/298 (96.31%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLAQRIVEGD+P SL+NKRLISLD++SMVAGAKYRGEFEERLQ+VLKEIEDADGEI+TF+DEMHTVVGAGGGADGAMDAGNMLKPMLARG+LRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAA+AILRGLKERYE+HHGVRIQD+ALVAAAVLSDRYLTGR LPDKAIDL+DEAGSSLRIEIDSVPTEIDVVERRIRQ+EIER+ALAKETDA S ERL+DLDRE+A+L+EEL+GLT  WQ+EKDAI  ++ +NEELDQLR  V+RETDLEKAA+LRYGRIP++ER
Sbjct:  206 KTAIVEGLAQRIVEGDVPMSLQNKRLISLDLTSMVAGAKYRGEFEERLQAVLKEIEDADGEIVTFIDEMHTVVGAGGGADGAMDAGNMLKPMLARGRLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAVAILRGLKERYEIHHGVRIQDAALVAAAVLSDRYLTGRHLPDKAIDLVDEAGSSLRIEIDSVPTEIDVVERRIRQIEIERLALAKETDAVSGERLQDLDREIADLQEELAGLTVRWQSEKDAIESLQTINEELDQLRGEVDRETDLEKAAQLRYGRIPDLER 503          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: A0A3M2HHY7_ACTSX (AAA family ATPase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2HHY7_ACTSX)

HSP 1 Score: 484 bits (1245), Expect = 2.030e-163
Identity = 255/298 (85.57%), Postives = 278/298 (93.29%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLAQRIVEGD+PDSLKNKRLI+LDM+SMVAGAKYRGEFEERLQ+VL+EIEDA GEIITF+DEMHTVVGAG G +GAMDAGNMLKPMLARGKLRM+GATTLDEYRKYIEKDPALERRFQQV VEPPSVE  IAILRGLKERYE+HHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDL+DEA S+LRIEIDSVPTEIDVVERRIRQLEIERVALAKETD  S ERL DLDRELA+LREEL  + A WQ EK+AI+E+R+L E+L++LR  VERETDLEKAA +RYG+IPE+ER
Sbjct:  202 KTAIVEGLAQRIVEGDVPDSLKNKRLIALDMASMVAGAKYRGEFEERLQAVLREIEDAAGEIITFIDEMHTVVGAGAGGEGAMDAGNMLKPMLARGKLRMIGATTLDEYRKYIEKDPALERRFQQVFVEPPSVEQTIAILRGLKERYEIHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLVDEAASNLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDEVSRERLADLDRELADLREELQSMKAHWQLEKEAITEIRDLKEQLERLRSEVERETDLEKAAAIRYGQIPELER 499          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: A0A7K1ZD45_9ACTN (AAA domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZD45_9ACTN)

HSP 1 Score: 477 bits (1227), Expect = 1.130e-160
Identity = 256/298 (85.91%), Postives = 280/298 (93.96%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLA RIVEGD+PDSL++KRLI+LD+S +VAGAKYRGEFEERLQ+VLKEIEDADGEIITFVDEMHTVVGAG  A+GAMDAGNMLKPMLARG+LRM+GATTLDEYRK++EKDPALERRFQQVLV PPSVE+ IAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQ EIER+ALAKETDAASAERL DLDRELA+LRE L+ LT  WQAEKDAI+ +RE+NE+L+ LR  VERE DLE+AAELRYG+IP +ER
Sbjct:  202 KTAIVEGLAARIVEGDVPDSLQHKRLINLDISLLVAGAKYRGEFEERLQAVLKEIEDADGEIITFVDEMHTVVGAGA-AEGAMDAGNMLKPMLARGRLRMIGATTLDEYRKHVEKDPALERRFQQVLVAPPSVESTIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQYEIERLALAKETDAASAERLSDLDRELADLREGLAALTIRWQAEKDAITALREINEQLEHLRGEVEREIDLERAAELRYGQIPGLER 498          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: A0A5Q2RS90_9ACTN (AAA domain-containing protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RS90_9ACTN)

HSP 1 Score: 454 bits (1167), Expect = 1.050e-151
Identity = 238/298 (79.87%), Postives = 273/298 (91.61%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLA RIVEGD+P+SLKNKRL+SLD+SSMVAGAKYRGEFEERL++VLKEI DA+GE++TF+DE+HT+VGAG  A+GAMDAGNM+KPMLARG+LRM+GATTLDE+RK+IEKDPALERRFQQV V  PSVE  IAILRGLKERYEVHHGVRIQD+ALVAA VLSDRYLTGRFLPDKAIDL+DEA S LRIEIDS+PTEIDVVERRIRQLEIERVALAKETD ASAERL  LD ELA+LRE+ +G+ A WQAEKDAI+ +R+L E+L+Q R  VERETDLEKAAE+RYG++P +E+
Sbjct:  202 KTAIVEGLAGRIVEGDVPESLKNKRLVSLDLSSMVAGAKYRGEFEERLKAVLKEITDAEGEVVTFIDELHTIVGAGA-AEGAMDAGNMIKPMLARGELRMIGATTLDEFRKHIEKDPALERRFQQVFVGEPSVEDTIAILRGLKERYEVHHGVRIQDAALVAAGVLSDRYLTGRFLPDKAIDLVDEAASKLRIEIDSMPTEIDVVERRIRQLEIERVALAKETDDASAERLASLDAELADLREQRTGMAAHWQAEKDAIARIRDLKEQLEQKRTEVERETDLEKAAEIRYGQLPALEK 498          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: UPI001E53E4D7 (AAA family ATPase n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E53E4D7)

HSP 1 Score: 450 bits (1157), Expect = 3.420e-150
Identity = 236/298 (79.19%), Postives = 272/298 (91.28%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLA+RIVEGD+P+SLKNKRLISLD+SSMVAGAKYRGEFEERL++VLKEI DA+GE+ITF+DEMHTVVGAG  A+G+MDAGNMLKP+LARG+LRM+GATTLDE+RK+IEKDPALERRFQQV+VE PSVE  IAILRGLKERYEVHHGVRIQD+ALV AAVLSDRYLTGRFLPDKAIDL+DEA S LRIEIDS+PTEID+VERRIRQLEIERVALAKETD ASAERL+ LD +LA L E+++ + A WQAEKDAI  +R L E L+  R+ +ERE DLEKA+E+RYG++PE+ER
Sbjct:  202 KTAIVEGLARRIVEGDVPESLKNKRLISLDLSSMVAGAKYRGEFEERLKAVLKEITDAEGEVITFIDEMHTVVGAGA-AEGSMDAGNMLKPLLARGQLRMIGATTLDEFRKHIEKDPALERRFQQVMVEQPSVEDTIAILRGLKERYEVHHGVRIQDAALVGAAVLSDRYLTGRFLPDKAIDLVDEAASKLRIEIDSMPTEIDMVERRIRQLEIERVALAKETDTASAERLDALDEDLANLNEQMAAMKAHWQAEKDAIDRIRALKEHLENKRLELEREADLEKASEIRYGQLPELER 498          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: A0A6I2YDM9_9ACTN (AAA domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I2YDM9_9ACTN)

HSP 1 Score: 448 bits (1153), Expect = 1.690e-149
Identity = 232/298 (77.85%), Postives = 271/298 (90.94%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLA+RIVEGD+P+SL++KR+ISLD+SSM+AGAKYRGEFEER+++VLKEI D++G++ITF+DEMHTVVGAGGGA+GAMDA NMLKPMLARG+LRMVGATTLDEYRKYIEKD ALERRFQQV V PPSVE  +AILRGLKERYEVHHGVRIQD+ALVAAAVLSDRY+T RFLPDKAIDL+DEA S LRIEIDS+PTEID++ERRIRQ+EIER+ALAKETDA S ERL  LD +LA  +E++SG+ A WQ+EKDAI+ +RE  E L+ LR  VER TDLE+AAE+RYGRIP+VER
Sbjct:  202 KTAIVEGLARRIVEGDVPESLRDKRVISLDLSSMLAGAKYRGEFEERMKAVLKEITDSEGQVITFIDEMHTVVGAGGGAEGAMDASNMLKPMLARGQLRMVGATTLDEYRKYIEKDAALERRFQQVYVAPPSVEDTVAILRGLKERYEVHHGVRIQDAALVAAAVLSDRYITSRFLPDKAIDLVDEAASKLRIEIDSMPTEIDIIERRIRQVEIERLALAKETDARSLERLAVLDEDLANQQEKISGMKAHWQSEKDAIASIRERKETLESLRAEVERSTDLERAAEIRYGRIPQVER 499          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: UPI001AA0A7E4 (ATP-dependent chaperone ClpB n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA0A7E4)

HSP 1 Score: 447 bits (1149), Expect = 5.420e-149
Identity = 235/298 (78.86%), Postives = 272/298 (91.28%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLA+RIVEGD+P+SL+NKRLI+LD+SSMVAGAKYRGEFEERL++VLKEI D++GE+ITFVDEMHT+VGAG  A+GAMDAGNM+KPMLARG+LRM+GATTLDEYRKY+EKDPALERRFQ V V+ PSVE  IAILRGLKERYEVHHGVRIQD+ALVAAAVLSDRYLTGRFLPDKAIDLIDEA S LRIEIDS+PTEIDVVERRIRQLEIERVALAKETD AS ERL  LD E   LRE+ +G+ A WQ+EK+AI++++ L E+L+  R+ +ERETDLE+AAE+RYG+IPE+ER
Sbjct:  202 KTAIVEGLARRIVEGDVPESLRNKRLIALDLSSMVAGAKYRGEFEERLKAVLKEITDSEGEVITFVDEMHTIVGAGA-AEGAMDAGNMIKPMLARGELRMIGATTLDEYRKYVEKDPALERRFQPVYVDQPSVEDTIAILRGLKERYEVHHGVRIQDAALVAAAVLSDRYLTGRFLPDKAIDLIDEAASKLRIEIDSMPTEIDVVERRIRQLEIERVALAKETDPASQERLAALDEEXXNLREQAAGMKAHWQSEKEAITQIQALKEQLENKRLELERETDLERAAEIRYGQIPELER 498          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: A0A7V9T0F4_9ACTN (Chaperone protein ClpB n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9T0F4_9ACTN)

HSP 1 Score: 447 bits (1149), Expect = 6.560e-149
Identity = 239/298 (80.20%), Postives = 270/298 (90.60%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLA+RIVEGD+P+ LK KRLISLD+S+MVAGAKYRGEFEERL++VLKEI DA+GE+ITF+DEMHTVVGAG  A+GAMDA NMLKP+LARG+LRMVGATTLDE+RK++E DPALERRFQQV V  PSVE  IAILRGLKERYEVHHGVRIQD+ALVAAAVLSDRYLTGRFLPDKAIDLIDE+GS LRIEIDS+PTEIDVVERRIRQLEIERVALAKETDAAS ERLE LDRELA+LRE+  G+ A W AEKDAI+ +R L EEL+  R  +ERE DLE+AAE+RYG+IP++ER
Sbjct:  202 KTAIVEGLARRIVEGDVPEGLKGKRLISLDLSAMVAGAKYRGEFEERLKAVLKEITDAEGEVITFIDEMHTVVGAGA-AEGAMDASNMLKPLLARGELRMVGATTLDEFRKHVESDPALERRFQQVFVGQPSVEDTIAILRGLKERYEVHHGVRIQDAALVAAAVLSDRYLTGRFLPDKAIDLIDESGSRLRIEIDSLPTEIDVVERRIRQLEIERVALAKETDAASVERLEALDRELADLREQSDGMKAHWTAEKDAIAAIRTLKEELEAKRSDMEREADLERAAEIRYGQIPDLER 498          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: A0A520XS01_9ACTN (AAA family ATPase n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XS01_9ACTN)

HSP 1 Score: 440 bits (1132), Expect = 1.930e-146
Identity = 231/297 (77.78%), Postives = 268/297 (90.24%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVE 891
            KTAIVEGLA RIVEGD+P+SLKNK ++SLD+++MVAGAKYRGEFEERL++VLKEI DA+G+IITF+DE+HTVVGAG G DGAMDAGNMLKPMLARG+LRM+GATTLDE+RK+IEKDPALERRFQQVLVEPPSVE  IAILRGL ERYEVHHGVRIQD+ALVAAAVLSDRYLTGRFLPDKAIDL+DE+ S LRIEIDSVPTEIDVV+RRIR LE+ERVAL KE+D AS +RL DL+ E+A+L E LS +   WQ+EK+AI ++R L EEL+QLR+ VERE DL KAAE+R+G+IPE E
Sbjct:  202 KTAIVEGLANRIVEGDVPESLKNKIVMSLDLAAMVAGAKYRGEFEERLKAVLKEINDAEGQIITFIDELHTVVGAGAGGDGAMDAGNMLKPMLARGELRMIGATTLDEFRKHIEKDPALERRFQQVLVEPPSVEDTIAILRGLAERYEVHHGVRIQDAALVAAAVLSDRYLTGRFLPDKAIDLVDESASKLRIEIDSVPTEIDVVDRRIRLLEMERVALEKESDKASKDRLSDLEVEVADLTERLSAMKVHWQSEKEAIDQIRGLKEELEQLRLDVEREEDLTKAAEIRFGQIPEHE 498          
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Match: A0A6J4LML6_9ACTN (ClpB protein (Fragment) n=1 Tax=uncultured Nocardioidaceae bacterium TaxID=253824 RepID=A0A6J4LML6_9ACTN)

HSP 1 Score: 430 bits (1105), Expect = 2.500e-146
Identity = 230/298 (77.18%), Postives = 265/298 (88.93%), Query Frame = 1
Query:    1 KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQSVLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRMVGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVHHGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPTEIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTATWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER 894
            KTAIVEGLA+RIVEGD+P+SLK++RLISLD+ +MVAGAK+RGEFEERL++VLKEI DA GE+ITF+DE+HTVVGAG  A+G+MDA NMLKP+LARG+LRM+GATTLDEYRK+IEKD ALERRF  V+V  PSVE  IAILRGLKERYEVHHGVRIQD+ALV AAVLSDRYLTGRFLPDKAIDL+DEA S LRIEIDS+PTE+DVVERRIRQLEIERVALAKETDAAS ERLE LDREL  LRE+ +G+   W AEK+AI+ +R L EEL+  R  VERE DLE+AAE+RYG+IPE+ER
Sbjct:   98 KTAIVEGLARRIVEGDVPESLKDRRLISLDLGAMVAGAKFRGEFEERLKAVLKEITDAQGEVITFIDELHTVVGAGA-AEGSMDASNMLKPLLARGELRMIGATTLDEYRKHIEKDAALERRFATVMVGQPSVEDTIAILRGLKERYEVHHGVRIQDAALVGAAVLSDRYLTGRFLPDKAIDLVDEAASRLRIEIDSMPTEVDVVERRIRQLEIERVALAKETDAASVERLEALDRELDALREQSAGMMGHWIAEKEAIATIRALKEELETKRSEVERELDLERAAEIRYGQIPELER 394          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83441.19485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8LVD1_9ACTN4.060e-16987.25Type VI secretion system ATPase TssH n=6 Tax=Acidi... [more]
A0A3M2HHY7_ACTSX2.030e-16385.57AAA family ATPase n=1 Tax=Actinomyces sp. TaxID=29... [more]
A0A7K1ZD45_9ACTN1.130e-16085.91AAA domain-containing protein n=2 Tax=Acidimicrobi... [more]
A0A5Q2RS90_9ACTN1.050e-15179.87AAA domain-containing protein n=1 Tax=Actinomarini... [more]
UPI001E53E4D73.420e-15079.19AAA family ATPase n=1 Tax=Rhabdothermincola sp. EG... [more]
A0A6I2YDM9_9ACTN1.690e-14977.85AAA domain-containing protein n=2 Tax=root TaxID=1... [more]
UPI001AA0A7E45.420e-14978.86ATP-dependent chaperone ClpB n=1 Tax=Rhabdothermin... [more]
A0A7V9T0F4_9ACTN6.560e-14980.20Chaperone protein ClpB n=1 Tax=Acidimicrobiia bact... [more]
A0A520XS01_9ACTN1.930e-14677.78AAA family ATPase n=2 Tax=Acidimicrobiales bacteri... [more]
A0A6J4LML6_9ACTN2.500e-14677.18ClpB protein (Fragment) n=1 Tax=uncultured Nocardi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83441contigM-pyrifera_M_contig83441:1..894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score424.9
Seed ortholog evalue3.2e-116
Seed eggNOG ortholog1121877.JQKF01000006_gene914
Preferred nameclpB
KEGG koko:K03694,ko:K03695
KEGG Pathwayko04213,map04213
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944
EggNOG free text desc.C-terminal, D2-small domain, of ClpB protein
EggNOG OGs2GJ73@201174,4CMTX@84992,COG0542@1,COG0542@2
COG Functional cat.O
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons1
Model size894
Cds size894
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816741.3615568-CDS-M-pyrifera_M_contig83441:0..8941622816741.3615568-CDS-M-pyrifera_M_contig83441:0..894Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83441 1..894 -
1692278150.793652-CDS-M-pyrifera_M_contig83441:0..8941692278150.793652-CDS-M-pyrifera_M_contig83441:0..894Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83441 1..894 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83441.19485.1prot_M-pyrifera_M_contig83441.19485.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83441 1..894 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83441.19485.1

>prot_M-pyrifera_M_contig83441.19485.1 ID=prot_M-pyrifera_M_contig83441.19485.1|Name=mRNA_M-pyrifera_M_contig83441.19485.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=298bp
KTAIVEGLAQRIVEGDIPDSLKNKRLISLDMSSMVAGAKYRGEFEERLQS
VLKEIEDADGEIITFVDEMHTVVGAGGGADGAMDAGNMLKPMLARGKLRM
VGATTLDEYRKYIEKDPALERRFQQVLVEPPSVEAAIAILRGLKERYEVH
HGVRIQDSALVAAAVLSDRYLTGRFLPDKAIDLIDEAGSSLRIEIDSVPT
EIDVVERRIRQLEIERVALAKETDAASAERLEDLDRELAELREELSGLTA
TWQAEKDAISEMRELNEELDQLRVAVERETDLEKAAELRYGRIPEVER
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mRNA from alignment at M-pyrifera_M_contig83441:1..894-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83441.19485.1 ID=mRNA_M-pyrifera_M_contig83441.19485.1|Name=mRNA_M-pyrifera_M_contig83441.19485.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig83441:1..894- (Macrocystis pyrifera P11B4 male)
AAGACCGCCATCGTCGAAGGGCTCGCCCAGCGCATCGTCGAGGGCGACAT CCCCGACTCGCTGAAGAACAAGCGCCTCATCAGCCTCGACATGTCGTCGA TGGTCGCCGGCGCCAAATACCGCGGCGAGTTCGAGGAGCGCCTCCAGTCG GTGCTGAAAGAGATCGAGGACGCCGACGGCGAGATCATCACGTTCGTCGA CGAGATGCACACGGTGGTCGGTGCCGGCGGCGGTGCCGACGGCGCCATGG ACGCGGGCAACATGCTCAAGCCCATGCTCGCCCGCGGCAAGCTCCGCATG GTCGGAGCCACCACGCTCGACGAGTACCGCAAGTACATCGAGAAGGACCC CGCGCTCGAACGTCGATTCCAGCAGGTGCTGGTCGAGCCCCCGTCGGTCG AAGCGGCGATCGCCATCCTGCGTGGTCTCAAGGAGCGCTACGAGGTCCAT CACGGCGTACGCATCCAGGACTCCGCGCTCGTCGCGGCCGCGGTGCTGAG CGATCGCTACCTCACCGGACGGTTCCTGCCCGACAAGGCCATCGACCTCA TCGACGAGGCCGGCAGCTCCCTGCGCATCGAGATCGACTCGGTCCCCACC GAGATCGACGTCGTCGAGCGCCGCATCCGCCAGCTCGAGATCGAGCGGGT GGCGCTGGCCAAGGAGACCGATGCCGCGTCCGCCGAGCGTCTCGAAGACC TCGACCGCGAGCTGGCCGAGCTGCGCGAGGAGCTCAGTGGCCTCACCGCC ACATGGCAGGCCGAGAAGGACGCCATCAGCGAGATGCGCGAGCTCAACGA GGAACTCGATCAGCTCCGCGTCGCCGTCGAGCGCGAGACCGACCTCGAGA AGGCGGCCGAGCTGCGCTACGGCCGCATCCCCGAGGTCGAACGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83441:1..894-

>mRNA_M-pyrifera_M_contig83441.19485.1 ID=mRNA_M-pyrifera_M_contig83441.19485.1|Name=mRNA_M-pyrifera_M_contig83441.19485.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1788bp|location=Sequence derived from alignment at M-pyrifera_M_contig83441:1..894- (Macrocystis pyrifera P11B4 male)
AAGACCGCCATCGTCGAAGGGCTCGCCCAGCGCATCGTCGAGGGCGACAT
CCCCGACTCGCTGAAGAACAAGCGCCTCATCAGCCTCGACATGTCGTCGA
TGGTCGCCGGCGCCAAATACCGCGGCGAGTTCGAGGAGCGCCTCCAGTCG
GTGCTGAAAGAGATCGAGGACGCCGACGGCGAGATCATCACGTTCGTCGA
CGAGATGCACACGGTGGTCGGTGCCGGCGGCGGTGCCGACGGCGCCATGG
ACGCGGGCAACATGCTCAAGCCCATGCTCGCCCGCGGCAAGCTCCGCATG
GTCGGAGCCACCACGCTCGACGAGTACCGCAAGTACATCGAGAAGGACCC
CGCGCTCGAACGTCGATTCCAGCAGGTGCTGGTCGAGCCCCCGTCGGTCG
AAGCGGCGATCGCCATCCTGCGTGGTCTCAAGGAGCGCTACGAGGTCCAT
CACGGCGTACGCATCCAGGACTCCGCGCTCGTCGCGGCCGCGGTGCTGAG
CGATCGCTACCTCACCGGACGGTTCCTGCCCGACAAGGCCATCGACCTCA
TCGACGAGGCCGGCAGCTCCCTGCGCATCGAGATCGACTCGGTCCCCACC
GAGATCGACGTCGTCGAGCGCCGCATCCGCCAGCTCGAGATCGAGCGGGT
GGCGCTGGCCAAGGAGACCGATGCCGCGTCCGCCGAGCGTCTCGAAGACC
TCGACCGCGAGCTGGCCGAGCTGCGCGAGGAGCTCAGTGGCCTCACCGCC
ACATGGCAGGCCGAGAAGGACGCCATCAGCGAGATGCGCGAGCTCAACGA
GGAACTCGATCAGCTCCGCGTCGCCGTCGAGCGCGAGACCGACCTCGAGA
AGGCGGCCGAGCTGCGCTACGGCCGCATCCCCGAGGTCGAACGCAAGACC
GCCATCGTCGAAGGGCTCGCCCAGCGCATCGTCGAGGGCGACATCCCCGA
CTCGCTGAAGAACAAGCGCCTCATCAGCCTCGACATGTCGTCGATGGTCG
CCGGCGCCAAATACCGCGGCGAGTTCGAGGAGCGCCTCCAGTCGGTGCTG
AAAGAGATCGAGGACGCCGACGGCGAGATCATCACGTTCGTCGACGAGAT
GCACACGGTGGTCGGTGCCGGCGGCGGTGCCGACGGCGCCATGGACGCGG
GCAACATGCTCAAGCCCATGCTCGCCCGCGGCAAGCTCCGCATGGTCGGA
GCCACCACGCTCGACGAGTACCGCAAGTACATCGAGAAGGACCCCGCGCT
CGAACGTCGATTCCAGCAGGTGCTGGTCGAGCCCCCGTCGGTCGAAGCGG
CGATCGCCATCCTGCGTGGTCTCAAGGAGCGCTACGAGGTCCATCACGGC
GTACGCATCCAGGACTCCGCGCTCGTCGCGGCCGCGGTGCTGAGCGATCG
CTACCTCACCGGACGGTTCCTGCCCGACAAGGCCATCGACCTCATCGACG
AGGCCGGCAGCTCCCTGCGCATCGAGATCGACTCGGTCCCCACCGAGATC
GACGTCGTCGAGCGCCGCATCCGCCAGCTCGAGATCGAGCGGGTGGCGCT
GGCCAAGGAGACCGATGCCGCGTCCGCCGAGCGTCTCGAAGACCTCGACC
GCGAGCTGGCCGAGCTGCGCGAGGAGCTCAGTGGCCTCACCGCCACATGG
CAGGCCGAGAAGGACGCCATCAGCGAGATGCGCGAGCTCAACGAGGAACT
CGATCAGCTCCGCGTCGCCGTCGAGCGCGAGACCGACCTCGAGAAGGCGG
CCGAGCTGCGCTACGGCCGCATCCCCGAGGTCGAACGC
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