mRNA_M-pyrifera_M_contig83438.19483.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: A0A5A8CQT1_CAFRO (Tetratricopeptide repeat protein 38 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CQT1_CAFRO) HSP 1 Score: 268 bits (685), Expect = 6.050e-83 Identity = 129/216 (59.72%), Postives = 151/216 (69.91%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYDAWIREGGPGDALLVGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAAADDSKSLDTLLDDMRA 648 DVL +R+LHD YYFLGDA QLRDS RV+G W+ PGY +CGMFAFGA E Q LAEEQ MR LSE+M D W+LHA+ HVYE GRRYEGQRLLRTSRW+WD ATLL HLHWHW L Q+ DG FE++ RYD W+RE +AL V DAA+LLWRMEL+G +DRW EL+P VR+ Y+DV AM AAA + L L MR+ Sbjct: 96 DVLAVRVLHDTYYFLGDAEQLRDSPGRVMGGWDAQRPGYLKLCGMFAFGAQECRQFALAEEQGMRALSEEMEDPWALHAVVHVYESLGRRYEGQRLLRTSRWFWDSATLLNVHLHWHWGLMQLGDGQFERAMGRYDEWLREDSATEALNVCDAASLLWRMELLGIDAFDRWAELVPLVRRFMGQHVMPYVDVHIAMVLAAAGEESLLADHLASMRS 311
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: A0A0K2VQE9_MESPL (Uncharacterized protein n=1 Tax=Mesorhizobium plurifarium TaxID=69974 RepID=A0A0K2VQE9_MESPL) HSP 1 Score: 156 bits (395), Expect = 6.490e-42 Identity = 83/212 (39.15%), Postives = 122/212 (57.55%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYDAWIREGGPGDALL-VGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAAADDSKSLDTLL 633 D L +R HD Y++LG + +RDS++RVL +W+TS P Y + G +AFG E +L AE+ A R ++ + DAW++HA+AHV E + R+ EG L+ SR W +A L H WH AL+ +E+G + YD +++ GD+LL + DA+ LLWR+EL G +V DRW L A + D+ A+ + AD LD LL Sbjct: 121 DALALRFAHDSYFYLGHSTSIRDSVARVLPSWDTSNPNYGFLLGQYAFGLEEAGELRRAEDFARRAIASNPEDAWAVHAVAHVLETESRQQEGIEFLKGSRPAWGKAHALSVHNGWHLALYLIEEGRLAEVLADYDRYVQPKLAGDSLLDLVDASALLWRVELAGGNVGDRWNALADQWLTHADDHVLVFNDLHIALALSRADKRDGLDRLL 332
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: UPI00117CC9C8 (tetratricopeptide repeat protein n=2 Tax=Mesorhizobium TaxID=68287 RepID=UPI00117CC9C8) HSP 1 Score: 148 bits (373), Expect = 1.050e-38 Identity = 81/215 (37.67%), Postives = 118/215 (54.88%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYDAWIREGGPGDALL-VGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAAADDSKSLDTLLDDM 642 D L +R HD Y++LG + +RDS++RVL W++S Y V G +AFG E +L AEE R ++++ DAW++HA+AHV E + R+ EG L+ SR W +A L H WH AL+ +E+G F + YD +IR D+LL + DA+ LLWR+EL G V DRW + + D+ A+ + A LD LL + Sbjct: 121 DALALRFAHDSYFYLGHSASIRDSVARVLPKWDSSNANYGFVLGQYAFGLEETGELRRAEEFGRRAIAKNAEDAWAVHAVAHVLETESRQREGIEFLKGSRPAWGKAHALSVHNGWHLALYLIEEGRFAEVLADYDRFIRPKLAADSLLDLVDASALLWRVELAGGDVGDRWSAVADQWLTHIDDHVLVFNDLHIALALSRAGRRDGLDRLLHSL 335
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: A0A0L8HU60_OCTBM (Tetratricopeptide repeat protein 38 n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8HU60_OCTBM) HSP 1 Score: 146 bits (369), Expect = 3.290e-38 Identity = 77/217 (35.48%), Postives = 121/217 (55.76%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYD--AWIREGGPGDALLVGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAAADDSKSLDTLLDDMR 645 D+L ++ HD Y+FLG Q+RDS++RVL W++S+P Y ++ GM AFG E + AE+ A++ L + +DAW+ HA+AHV EM GR+ +G L T+ W +L H +WHWAL+ +E G +E + YD +R G L D A+LL+R++L G +V +RW + A ++ D M+ A + D LL+ ++ Sbjct: 122 DILALKFAHDSYFFLGLRPQMRDSVARVLPYWDSSIPLYGYLHGMLAFGQEETNLFDQAEKSALKALGINKKDAWATHAMAHVNEMLGRQNQGSTFLETTEKDWSVCGMLACHNYWHWALYHIEKGQYEAALDIYDREVAVRAKNSGAMLDFVDKASLLYRLQLEGINVSERWSSCFEEFKDHATDHILSFNDAHSMMSCLGAGQEEFSDKLLESLQ 338
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: UPI00131B959B (tetratricopeptide repeat protein n=1 Tax=Methylocapsa sp. S129 TaxID=1641869 RepID=UPI00131B959B) HSP 1 Score: 146 bits (368), Expect = 4.230e-38 Identity = 81/217 (37.33%), Postives = 120/217 (55.30%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYDAWIREGGPGDALL-VGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAAADDSKSLDTL---LDD 639 D L +R HD Y++LG +V +RDS++RVL AW+ P Y V G +AFG E +L AEE + ++ + D W++HA+AHV E + R+ EG L+ SR W +A L H WH AL+ +E+G F + YD ++ GD+LL + DA+ +LWR+EL G V DRW L + D+ A+ + A+D + + L LDD Sbjct: 121 DALALRFAHDSYFYLGHSVSIRDSVARVLPAWDRENPNYGFVLGQYAFGLEEAGELRRAEEFGRQAIARNAEDGWAVHAIAHVLETESRQSEGIDFLKRSRPSWSKAHALSVHNGWHLALYLIEEGRFAEVLADYDRFVAPKISGDSLLDLVDASAVLWRLELAGADVGDRWAPLARQWLTHVDDHVLVFNDLHIALAVSRANDPEGVARLRRSLDD 337
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: UPI001A0B0A23 (Tetratricopeptide repeat protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0B0A23) HSP 1 Score: 144 bits (362), Expect = 4.600e-38 Identity = 81/200 (40.50%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYDAWIREGGPGDALLVGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAA 600 D+L ++L + Y++LGDA +RDSI+RVL AW PG+ V GM+AFG E AE R ++ D W++HA+ HV EMQGR EG L+TS W NHL WH AL M+ + YD+ IR D L + +AA+LLWR+E G V DRW EL A+ A+ D Y M AA Sbjct: 131 DMLALKLANRGYFYLGDARNIRDSIARVLYAWNEDTPGHGFVLGMYAFGLEECGDYANAEAVGHRAVAIKPADVWAIHAVTHVLEMQGRHREGTDWLKTSEKIWTNCNNFANHLWWHGALLLMDLERYHAVLDGYDSRIRAEQTDDYLDIANAASLLWRLEETGVDVGDRWVELADKAEAHARDHKLAFADAHYMMALAA 330
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: UPI000359A850 (tetratricopeptide repeat protein 38 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359A850) HSP 1 Score: 145 bits (365), Expect = 1.690e-37 Identity = 70/176 (39.77%), Postives = 108/176 (61.36%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEK--SAFRYDAWIREGGPGDALLVGDAANLLWRMELMGNHVYDRWEEL 522 DVL ++ HD Y++LG + Q+RDSI+RVL W+ +MP Y ++ GM +FG E AE A + LS + RDAW+ H L HV EM GR++EG +++T+ +W+ +L H HWHWAL+ +E G +E S F + +R G L V D +LL+R+++ G + RW+++ Sbjct: 141 DVLALKFAHDTYFYLGYSAQIRDSIARVLPHWKPTMPLYGYIHGMHSFGLEETNLYPEAEAAARKALSINPRDAWATHTLCHVMEMMGRQHEGIHMMQTTTQYWESCGMLACHNHWHWALYYLEIGDYESALSIFDKEVTVRAANSGAMLDVVDVCSLLFRLQIEGVDIGQRWDKV 316
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: UPI00112C7705 (tetratricopeptide repeat protein 38 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112C7705) HSP 1 Score: 144 bits (363), Expect = 3.430e-37 Identity = 73/217 (33.64%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYDAWIREGG--PGDALLVGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAAADDSKSLDTLLDDMR 645 D+L ++ +HD Y++LG + Q+RDS++RVL W+ S+P +V GM++FG E + A++ A L+ D +DAWS+H +AHV+EM+ +G + ++ + W + +L H+ WHW L+ +E G +E + YD +I G G L V D ++LL+R+++ G ++ DRW++LL + AK + D+ M+ A+D + + LL ++ Sbjct: 142 DLLALKFVHDTYFYLGFSEQMRDSVARVLPYWKPSIPFSNYVKGMYSFGLIETNFYDQAQKVADEALAVDPKDAWSVHTIAHVHEMKAELEKGLKFMQQTESHWKDCDMLACHIFWHWGLYFIEKGDYEAALTLYDDYIATHGFASGAMLDVVDNSSLLYRLQMEGVNIGDRWKKLLQITKPHAKDHVLLFNDLHILMSSLGANDQEMTNQLLTTLQ 358
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: A0A6P7Z464_9AMPH (Tetratricopeptide repeat protein 38 n=3 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7Z464_9AMPH) HSP 1 Score: 144 bits (363), Expect = 3.860e-37 Identity = 71/217 (32.72%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYDAWIREGG--PGDALLVGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAAADDSKSLDTLLDDMR 645 D+L ++ +HD Y++LG + Q+RDS++RVL W+ S+P +V GM++FG E + AE+ A L+ D +DAWS+H +AHV+EM+ +G + ++ + W + +L H+ WHWAL+ +E G +E + YD +I + G L + D +++L+R+++ G ++ +RW++LL + AK + D+ M+ A D ++ LL ++ Sbjct: 150 DLLALKFVHDTYFYLGFSAQMRDSVARVLPYWKPSVPFSNYVKGMYSFGLIETNFYDQAEKVANEALAVDQKDAWSIHTIAHVHEMKAEIEKGLKFMQKTENQWKDCDMLACHIFWHWALYYIEKGEYEAALNLYDDYIAKYALSSGTMLDIVDNSSVLYRIQMEGVNIGERWKKLLQVTKSHAKDHVLIFNDLHILMSSLGASDQETTHKLLTTLQ 366
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Match: A0A4X2MD36_VOMUR (Tetratricopeptide repeat protein 38 n=5 Tax=Diprotodontia TaxID=38609 RepID=A0A4X2MD36_VOMUR) HSP 1 Score: 144 bits (362), Expect = 6.120e-37 Identity = 73/217 (33.64%), Postives = 123/217 (56.68%), Query Frame = 1 Query: 1 DVLCIRLLHDMYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEEQAMRVLSEDMRDAWSLHALAHVYEMQGRRYEGQRLLRTSRWWWDEATLLQNHLHWHWALFQMEDGHFEKSAFRYDAWIREG--GPGDALLVGDAANLLWRMELMGNHVYDRWEELLPHVRKLAKTRSWAYLDVLYAMTFAAADDSKSLDTLLDDMR 645 D+L ++ HD Y++LG Q+RDS++RVL W S+P +V G+++FG E + AE+ A LS + DAWS+H +AH+YEM+ +G +++S W + +L H +WHWAL+ +E G E + YD I G L + D+ ++L+R+++ G HV DRW+ +LP + ++ + D + M+F A D ++ LL ++ Sbjct: 159 DILALKFSHDAYFYLGYQPQMRDSVARVLPHWTPSIPLSSYVKGIYSFGLMETNLYDQAEQLAREALSVNPTDAWSVHTVAHIYEMKAEIKDGLSFMQSSESNWKDRDMLACHNYWHWALYLIEKGEHEAALTIYDEHIAPSLLSTGSVLDMVDSCSMLYRLQMEGVHVGDRWQAVLPVTKPHSRDHILLFNDAHFLMSFLGAKDHGTVRELLTTLQ 375 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83438.19483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83438.19483.1 >prot_M-pyrifera_M_contig83438.19483.1 ID=prot_M-pyrifera_M_contig83438.19483.1|Name=mRNA_M-pyrifera_M_contig83438.19483.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp MYYFLGDAVQLRDSISRVLGAWETSMPGYFHVCGMFAFGAAENMQLNLAEback to top mRNA from alignment at M-pyrifera_M_contig83438:4..741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83438.19483.1 ID=mRNA_M-pyrifera_M_contig83438.19483.1|Name=mRNA_M-pyrifera_M_contig83438.19483.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig83438:4..741+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83438:4..741+ >mRNA_M-pyrifera_M_contig83438.19483.1 ID=mRNA_M-pyrifera_M_contig83438.19483.1|Name=mRNA_M-pyrifera_M_contig83438.19483.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig83438:4..741+ (Macrocystis pyrifera P11B4 male)back to top |