mRNA_M-pyrifera_M_contig83431.19481.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83431.19481.1
Unique NamemRNA_M-pyrifera_M_contig83431.19481.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A7S3E360_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E360_9CHLO)

HSP 1 Score: 193 bits (491), Expect = 1.870e-55
Identity = 121/269 (44.98%), Postives = 162/269 (60.22%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVL-LILATGLYTLTGGLSAVVWTEVVQTLVLLGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPM-HARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            +SL LYVLTKIA TL+ G L+L  ++ +   W +VL LIL T  YTL GGL AV++TE +QT+VL  G  A+   + ++ GG+ T      PP                       PY      +++RP DD  +P  G L+GYFV SLWYW +DQ I QR +AA D + HARGG VGA+++KL   F+MV PGM AR LM R GV+    P S      +D AF WL+ + +P  LRG++I + + ALMSSLASVFNS +T++ALD+Y
Sbjct:    6 LSLALYVLTKIAATLFAGELILAEVSHMPA-WASVLCLILGTAAYTLVGGLKAVIYTEALQTVVLFIGGFALLGVSLAEVGGLHTFIRDSEPPAGQ--------------------PYY----FKIFRPFDDADFPFTGFLTGYFVTSLWYWCSDQVITQRVIAARDRIEHARGGCVGASYLKLLPGFIMVVPGMIARELMTREGVLDTNSPRSD-----YDRAFTWLVLNCMPINLRGLLIASMISALMSSLASVFNSCATIMALDVY 244          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A7S1CRF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CRF3_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.620e-55
Identity = 119/268 (44.40%), Postives = 159/268 (59.33%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVLLILATGLYTLTGGLSAVVWTEVVQTLVLL-GGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            +SL+LY+ TKI+ TL+ G +VL   + ++    A L+I+ T  YT  GGLSAVV+TE +QT+VLL GG +  AVG F+  GGVE +  +L                                   L+RPV DE +P  G + GY+ +SLWYW  DQ I+QRALAA D  H R G V  + +K   +FLMVFPGM ARVLM  AGVI    PT    P V+D A+PWLI  ++P+   G+++ A L +LMSSLASVFNS++TL  +D+Y
Sbjct:   18 LSLVLYIFTKISATLFAGQVVLATTSHLNPWASAALMIVGTAAYTTLGGLSAVVYTEAMQTVVLLVGGGILAAVG-FNAVGGVEGLRGRLDD-----------------------------SFFHLFRPVTDEDFPWTGFVFGYYCMSLWYWGCDQAIVQRALAARDIRHGRAGAVITSLLKALPVFLMVFPGMIARVLMEDAGVIDREDPTDD--PAVYDRAYPWLILRLMPEHTHGLLLAAILSSLMSSLASVFNSSATLFTMDIY 253          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A388JRU6_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JRU6_CHABU)

HSP 1 Score: 182 bits (461), Expect = 5.200e-49
Identity = 110/268 (41.04%), Postives = 158/268 (58.96%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVLLILATGLYTLTGGLSAVVWTEVVQTLVLL-GGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            +SL LY+ TKI+  L+ G L++  L  ++     V LI+AT LYT+TGGL+AVV+TE +QT++LL GG + +AVG   K GG   +  +++   N                              L RP  D  +P  G + GY+ ++LWYW+TDQ I+QRALAA +  H RGG V   ++KL   F+MV PGM AR LM R GV+     T     +VFD A+PWL+ +V P+  +G++I AT+ ALMSSLAS+FNS +T+  +++Y
Sbjct:  135 LSLFLYIFTKISAALFAGQLIISELIDVNKFAATVALIVATALYTVTGGLAAVVYTETLQTVILLLGGCMMLAVG-LQKVGGFGGLKSEINHNRNYF---------------------------HLLRPASDPTFPWTGFIFGYYFVALWYWTTDQVIVQRALAARNIQHGRGGCVAGCYLKLLPGFIMVVPGMIARALMQRKGVV-----TKDSHQQVFDRAYPWLVVNVAPKHTKGLLIAATVAALMSSLASIFNSCATIFTMNIY 369          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A5B8MGM7_9CHLO (Hypothetical protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MGM7_9CHLO)

HSP 1 Score: 178 bits (451), Expect = 2.900e-48
Identity = 117/269 (43.49%), Postives = 158/269 (58.74%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAV-LLILATGLYTLTGGLSAVVWTEVVQTLVL-LGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            +SL LYVLTKI+ TLY G L+L     + G WI+V LLI+ T LYT+TGGLSAV++TE +QT++L +GG + + + + S+ GG+ +   Q + P                  H ++          + RP  D  +P  G  +GYFV SLWYW  DQ I+QRA+AA    H R G + AA++KL   F+MV PGM A  LM   GV+ A    S      +D AF WL+ +V+P   RGII+ A + ALMSSLASVFNS ST+  LD+Y
Sbjct:  133 LSLALYVLTKISATLYAGQLILAETLQVGG-WISVGLLIVGTALYTVTGGLSAVIYTEALQTIILFIGGFLLLGISS-SEVGGLFSFLGQTTFPEKP---------------HYFS----------MLRPPGDAEFPWTGFFTGYFVTSLWYWCNDQVIVQRAIAARTVQHGRAGCLAAAYLKLLPGFIMVMPGMIAFQLMRDRGVLNAESERSE-----YDRAFSWLVMNVMPNNTRGIIVSAMVSALMSSLASVFNSCSTIFTLDVY 369          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A7R9TXL3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TXL3_9VIRI)

HSP 1 Score: 171 bits (434), Expect = 1.720e-45
Identity = 116/270 (42.96%), Postives = 157/270 (58.15%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALAS-IDGEWIAVLLILATGLYTLTGGLSAVVWTEVVQTLVLLGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMA--RAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            ISL LY+LTK+  TL+ G +VL  +A      +  VLLI  TGLYTL GGL AVVWTEV+QTL +L G V   + A  +AGG + V + L              +GE        VP + +    + R   DE YP     +GYFV+S+WYW+ DQ I QR LAA    H +   V A+++KL+  FLMVFPGM +R +    R GV      +  V    +D A PWL+ +VLP   RGI++ A + ALMSSLASVFNS++TL+++D++
Sbjct:  141 ISLTLYILTKVGATLFAGGVVLREVAGEAAARFAPVLLIALTGLYTLAGGLKAVVWTEVLQTLTILLGGVLTLILALREAGGWDGVRDTL--------------DGE--------VPDKYW---HILRSAADEEYPWTAFATGYFVVSVWYWAVDQEIAQRVLAARGLAHGQAACVAASFLKLAPGFLMVFPGMISRAIQRQRRQGVYSPSGDSDEVD---YDRALPWLVINVLPPVARGIVVAAMIAALMSSLASVFNSSATLLSVDVW 382          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A1V5QB37_9BACT (Sodium/glucose cotransporter n=1 Tax=Verrucomicrobia bacterium ADurb.Bin345 TaxID=1852930 RepID=A0A1V5QB37_9BACT)

HSP 1 Score: 166 bits (421), Expect = 2.250e-44
Identity = 106/267 (39.70%), Postives = 153/267 (57.30%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVLLILATGLYTLTGGLSAVVWTEVVQTLVLLGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            +S+I YVLTKI+ T+Y G +V  AL  I+    A++++LATG+YT+ GGL AV++T+++Q LVL+GG+VAV V   ++AGG  T+ E+  P                                 ++RP  D  +P   +L G  +L LWYW TDQ I+QR L+A +   AR GT+ A ++K   +F+ V PG+ A VL+ R G +    P         D A P LI  +LP G+RG+++   L ALMSSL+SVFNS STL+  D+Y
Sbjct:  129 VSIISYVLTKISVTIYAGGVVFTALMGIEFWTGAIIVVLATGIYTVFGGLRAVLYTDMIQALVLIGGSVAVTVIGLNEAGGWSTLCEEAGP-----------------------------GMMSMWRPFSDPDFPWTAVLLGAPILGLWYWCTDQFIVQRVLSAKNEEEARRGTIFAGFLKQLPLFIFVIPGVIAFVLVQR-GSMELSRP---------DEALPVLIARLLPAGIRGLVVAGLLAALMSSLSSVFNSCSTLITWDVY 356          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A7Y7CW19_9BACT (Sodium/solute symporter n=1 Tax=Flavobacteriia bacterium TaxID=2044941 RepID=A0A7Y7CW19_9BACT)

HSP 1 Score: 166 bits (421), Expect = 2.380e-44
Identity = 109/266 (40.98%), Postives = 147/266 (55.26%), Query Frame = 1
Query:    4 SLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVLLILATGLYTLTGGLSAVVWTEVVQTLVLLGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            S+I Y+LTKI+ TL  G LVL AL  ID  W  ++++  TGLYT+ GGL AV++T+++Q  VLLGGAVA+       AGG   V     P                               T L+R ++D+ +P  G+L G  +L +WYW TDQ I+QR LAA +   AR G + A ++KL+ MFL V PG+ A VL    G+ P            +DSA P L   VLP+G RG++I   + ALMSSL+SVFNS STL  +D+Y
Sbjct:  134 SVIAYILTKISITLVAGGLVLTALLDIDFWWSTLIIVAVTGLYTIIGGLKAVLYTDMIQLFVLLGGAVALVYFGLDAAGGWNNVVASTEP-----------------------------SYTSLWRTMNDDAFPWTGILIGAPILGVWYWCTDQFIVQRVLAAKNIKVARRGAIFAGFLKLTPMFLFVIPGLIAFVLSQ--GLNPLIDFPVINGETAYDSALPLLAMSVLPEGFRGLVIAGLIAALMSSLSSVFNSCSTLFTMDIY 368          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A660XSH0_9BACT (Sodium transporter n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A660XSH0_9BACT)

HSP 1 Score: 165 bits (417), Expect = 8.210e-44
Identity = 103/267 (38.58%), Postives = 155/267 (58.05%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVLLILATGLYTLTGGLSAVVWTEVVQTLVLLGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            IS+I YVLTKI+ T+  G +V   L  I+    A+++++ATG+YT+ GGL AV++T+++Q  +L+GG++ V V    K GGV+ ++E +                             GY    ++RPV D  +P  G++ G  +L +WYW TDQ I+QR L+A +  +AR GT+   ++KL  +F+ V PG+ A  L A++G +  G P         D A P LI  ++P GLRG+I+   L ALMSSL+SVFNS STL+ LD+Y
Sbjct:  129 ISIIAYVLTKISVTIAAGGIVFETLMGINFWTGALIVVVATGIYTVLGGLRAVLYTDMLQMFILIGGSILVTVTGLLKLGGVQRLYEVVG---------------------------SGY--FNMWRPVSDPNFPWTGIIFGIPILGIWYWCTDQFIVQRVLSAKNIENARRGTIFGGYLKLLPVFIFVIPGVVAHAL-AKSGQLTLGRP---------DQALPALISVLIPIGLRGLIVAGLLAALMSSLSSVFNSCSTLITLDIY 356          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A7V9CMA5_9BACT (Sodium/solute symporter n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9CMA5_9BACT)

HSP 1 Score: 164 bits (414), Expect = 1.970e-43
Identity = 102/267 (38.20%), Postives = 151/267 (56.55%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVLLILATGLYTLTGGLSAVVWTEVVQTLVLLGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            +S++ Y+ TKI+ +LY G L+L  L   D    ++ ++LATG+YT+ GGLSAV++TEVVQ +VLL GAV + V    + GG                         W      A+P E +    + RP+ D  +P  G+L G  +L LWYW TDQ I+QR L A +  HARGGT+ AA +K++ +F++V PG+ AR L                P    D+A+P ++  +LP GL G+++ A + ALMSSL++ FNS+STL+  D+Y
Sbjct:  122 VSVVAYIFTKISVSLYAGALLLHTLVGWDFYTSSIAMVLATGVYTVVGGLSAVIYTEVVQAVVLLAGAVLLTVLGLWEVGG-------------------------WSGLRA-ALPAESFS---MIRPMTDPDFPWTGILFGAPILGLWYWCTDQVIVQRVLGARNEAHARGGTIFAALLKITPVFVLVLPGLIARAL---------------YPEVTGDNAYPVMVVRLLPSGLTGLMVAALMAALMSSLSATFNSSSTLITFDVY 344          
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Match: A0A545U789_9GAMM (Sodium/solute symporter n=2 Tax=Exilibacterium tricleocarpae TaxID=2591008 RepID=A0A545U789_9GAMM)

HSP 1 Score: 162 bits (409), Expect = 1.110e-42
Identity = 109/267 (40.82%), Postives = 152/267 (56.93%), Query Frame = 1
Query:    1 ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVLLILATGLYTLTGGLSAVVWTEVVQTLVLLGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANATAAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWYWSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMARAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSSLASVFNSASTLVALDLY 801
            IS++ YVLTKI+ T+  G +V   L  ID    A+++++ATG+YT+ GGL AV++T+ VQ  VL+GGA+AV V    + GG                         WR     A    G D   L++P+ D  +P  G+L G  +L +WYW TDQ I+QR L+A D  +AR GTV AA++K   +F+ V PG+ A VL +++G +              D A P LIG +LP GLRG+++   L ALMSSL+SVFNS STL+  DLY
Sbjct:  125 ISIVGYVLTKISVTIAAGGIVFETLMGIDFWTGALIVVVATGIYTVWGGLRAVLYTDTVQMFVLIGGAIAVTVIGLQEVGG-------------------------WRELQVQA----GDDYFDLWKPLSDPEFPWTGILFGAPILGVWYWCTDQFIVQRVLSARDEDNARRGTVFAAFLKQLPLFIFVVPGIIAYVL-SKSGQLQM---------EQADQALPALIGALLPDGLRGLVVAGLLAALMSSLSSVFNSCSTLITFDLY 352          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83431.19481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3E360_9CHLO1.870e-5544.98Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A7S1CRF3_9STRA6.620e-5544.40Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A388JRU6_CHABU5.200e-4941.04Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A5B8MGM7_9CHLO2.900e-4843.49Hypothetical protein n=2 Tax=Chloropicon primus Ta... [more]
A0A7R9TXL3_9VIRI1.720e-4542.96Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A1V5QB37_9BACT2.250e-4439.70Sodium/glucose cotransporter n=1 Tax=Verrucomicrob... [more]
A0A7Y7CW19_9BACT2.380e-4440.98Sodium/solute symporter n=1 Tax=Flavobacteriia bac... [more]
A0A660XSH0_9BACT8.210e-4438.58Sodium transporter n=1 Tax=Candidatus Marinimicrob... [more]
A0A7V9CMA5_9BACT1.970e-4338.20Sodium/solute symporter n=1 Tax=Acidobacteria bact... [more]
A0A545U789_9GAMM1.110e-4240.82Sodium/solute symporter n=2 Tax=Exilibacterium tri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83431contigM-pyrifera_M_contig83431:61..861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score162.2
Seed ortholog evalue3.5e-37
Seed eggNOG ortholog9785.ENSLAFP00000024836
Preferred nameSLC5A1
KEGG koko:K14158
KEGG TC2.A.21.3.1
KEGG Pathwayko04973,ko04976,ko04978,map04973,map04976,map04978
Hectar predicted targeting categorysignal peptide
GOsGO:0001655,GO:0001656,GO:0001822,GO:0001951,GO:0003008,GO:0003674,GO:0005215,GO:0005355,GO:0005402,GO:0005412,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005903,GO:0005911,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0007275,GO:0007586,GO:0008150,GO:0008324,GO:0008643,GO:0008645,GO:0015075,GO:0015077,GO:0015081,GO:0015144,GO:0015145,GO:0015149,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015370,GO:0015672,GO:0015749,GO:0016020,GO:0016021,GO:0016324,GO:0022600,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030054,GO:0031224,GO:0031226,GO:0031253,GO:0031526,GO:0032501,GO:0032502,GO:0034219,GO:0034220,GO:0035725,GO:0042995,GO:0044425,GO:0044459,GO:0044463,GO:0044464,GO:0045177,GO:0046873,GO:0048513,GO:0048731,GO:0048856,GO:0050892,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0072001,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098862,GO:0106001,GO:0120025,GO:0120038,GO:1904659
EggNOG free text desc.sodium glucose cotransporter
EggNOG OGs34W2X@311790,38E3B@33154,3BA8Y@33208,3CRHR@33213,3JAHP@40674,47ZTB@7711,48YEB@7742,COG0591@1,KOG2349@2759
COG Functional cat.P
Best tax levelAfrotheria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04147
Exons1
Model size801
Cds size801
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816741.1901631-CDS-M-pyrifera_M_contig83431:60..8611622816741.1901631-CDS-M-pyrifera_M_contig83431:60..861Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83431 61..861 -
1692278150.701453-CDS-M-pyrifera_M_contig83431:60..8611692278150.701453-CDS-M-pyrifera_M_contig83431:60..861Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83431 61..861 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83431.19481.1prot_M-pyrifera_M_contig83431.19481.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83431 61..861 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83431.19481.1

>prot_M-pyrifera_M_contig83431.19481.1 ID=prot_M-pyrifera_M_contig83431.19481.1|Name=mRNA_M-pyrifera_M_contig83431.19481.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
ISLILYVLTKIAPTLYGGVLVLGALASIDGEWIAVLLILATGLYTLTGGL
SAVVWTEVVQTLVLLGGAVAVAVGAFSKAGGVETVFEQLSPPPNAVANAT
AAREGEWRWRHEYAVPYEGYDRTRLYRPVDDERYPMAGLLSGYFVLSLWY
WSTDQTILQRALAASDPMHARGGTVGAAWMKLSTMFLMVFPGMAARVLMA
RAGVIPAGLPTSAVPPRVFDSAFPWLIGHVLPQGLRGIIIGATLGALMSS
LASVFNSASTLVALDLY
back to top

mRNA from alignment at M-pyrifera_M_contig83431:61..861-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83431.19481.1 ID=mRNA_M-pyrifera_M_contig83431.19481.1|Name=mRNA_M-pyrifera_M_contig83431.19481.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=801bp|location=Sequence derived from alignment at M-pyrifera_M_contig83431:61..861- (Macrocystis pyrifera P11B4 male)
ATTTCTCTGATCTTGTATGTTTTAACCAAGATTGCGCCAACGTTGTATGG AGGTGTCTTGGTTCTTGGTGCGCTGGCTTCCATTGATGGGGAATGGATTG CAGTTTTGCTAATTTTAGCAACAGGATTGTACACACTCACAGGTGGATTG TCAGCAGTGGTTTGGACAGAAGTTGTGCAGACATTGGTCTTGTTAGGTGG TGCTGTTGCAGTTGCTGTTGGTGCATTCTCGAAAGCTGGTGGTGTTGAGA CTGTGTTTGAACAGCTTTCTCCACCTCCAAATGCAGTTGCCAATGCTACA GCGGCAAGGGAGGGAGAATGGCGTTGGAGACATGAATATGCTGTTCCGTA TGAAGGATATGATCGGACACGGTTGTACCGCCCAGTGGATGATGAAAGGT ATCCAATGGCTGGTTTGTTGTCTGGATACTTTGTGCTTTCACTGTGGTAT TGGTCCACAGACCAGACAATCCTACAACGTGCACTTGCTGCTTCTGATCC TATGCATGCGCGTGGTGGAACTGTTGGTGCTGCGTGGATGAAACTCAGCA CCATGTTTTTGATGGTTTTCCCTGGGATGGCAGCTCGTGTATTGATGGCT CGTGCTGGAGTGATCCCTGCTGGATTACCAACATCTGCTGTACCCCCTCG TGTCTTTGACAGTGCATTTCCATGGTTGATTGGACATGTATTGCCACAAG GATTGCGAGGAATTATTATCGGTGCTACTCTTGGCGCTCTCATGTCTTCT CTCGCAAGTGTGTTTAATTCTGCATCAACCCTTGTAGCACTTGATTTGTA T
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig83431:61..861-

>mRNA_M-pyrifera_M_contig83431.19481.1 ID=mRNA_M-pyrifera_M_contig83431.19481.1|Name=mRNA_M-pyrifera_M_contig83431.19481.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig83431:61..861- (Macrocystis pyrifera P11B4 male)
ATTTCTCTGATCTTGTATGTTTTAACCAAGATTGCGCCAACGTTGTATGG
AGGTGTCTTGGTTCTTGGTGCGCTGGCTTCCATTGATGGGGAATGGATTG
CAGTTTTGCTAATTTTAGCAACAGGATTGTACACACTCACAGGTGGATTG
TCAGCAGTGGTTTGGACAGAAGTTGTGCAGACATTGGTCTTGTTAGGTGG
TGCTGTTGCAGTTGCTGTTGGTGCATTCTCGAAAGCTGGTGGTGTTGAGA
CTGTGTTTGAACAGCTTTCTCCACCTCCAAATGCAGTTGCCAATGCTACA
GCGGCAAGGGAGGGAGAATGGCGTTGGAGACATGAATATGCTGTTCCGTA
TGAAGGATATGATCGGACACGGTTGTACCGCCCAGTGGATGATGAAAGGT
ATCCAATGGCTGGTTTGTTGTCTGGATACTTTGTGCTTTCACTGTGGTAT
TGGTCCACAGACCAGACAATCCTACAACGTGCACTTGCTGCTTCTGATCC
TATGCATGCGCGTGGTGGAACTGTTGGTGCTGCGTGGATGAAACTCAGCA
CCATGTTTTTGATGGTTTTCCCTGGGATGGCAGCTCGTGTATTGATGGCT
CGTGCTGGAGTGATCCCTGCTGGATTACCAACATCTGCTGTACCCCCTCG
TGTCTTTGACAGTGCATTTCCATGGTTGATTGGACATGTATTGCCACAAG
GATTGCGAGGAATTATTATCGGTGCTACTCTTGGCGCTCTCATGTCTTCT
CTCGCAAGTGTGTTTAATTCTGCATCAACCCTTGTAGCACTTGATTTGTA
TATTTCTCTGATCTTGTATGTTTTAACCAAGATTGCGCCAACGTTGTATG
GAGGTGTCTTGGTTCTTGGTGCGCTGGCTTCCATTGATGGGGAATGGATT
GCAGTTTTGCTAATTTTAGCAACAGGATTGTACACACTCACAGGTGGATT
GTCAGCAGTGGTTTGGACAGAAGTTGTGCAGACATTGGTCTTGTTAGGTG
GTGCTGTTGCAGTTGCTGTTGGTGCATTCTCGAAAGCTGGTGGTGTTGAG
ACTGTGTTTGAACAGCTTTCTCCACCTCCAAATGCAGTTGCCAATGCTAC
AGCGGCAAGGGAGGGAGAATGGCGTTGGAGACATGAATATGCTGTTCCGT
ATGAAGGATATGATCGGACACGGTTGTACCGCCCAGTGGATGATGAAAGG
TATCCAATGGCTGGTTTGTTGTCTGGATACTTTGTGCTTTCACTGTGGTA
TTGGTCCACAGACCAGACAATCCTACAACGTGCACTTGCTGCTTCTGATC
CTATGCATGCGCGTGGTGGAACTGTTGGTGCTGCGTGGATGAAACTCAGC
ACCATGTTTTTGATGGTTTTCCCTGGGATGGCAGCTCGTGTATTGATGGC
TCGTGCTGGAGTGATCCCTGCTGGATTACCAACATCTGCTGTACCCCCTC
GTGTCTTTGACAGTGCATTTCCATGGTTGATTGGACATGTATTGCCACAA
GGATTGCGAGGAATTATTATCGGTGCTACTCTTGGCGCTCTCATGTCTTC
TCTCGCAAGTGTGTTTAATTCTGCATCAACCCTTGTAGCACTTGATTTGT
AT
back to top