mRNA_M-pyrifera_M_contig8339.19477.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8339.19477.1
Unique NamemRNA_M-pyrifera_M_contig8339.19477.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A6H5L673_9PHAE (Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L673_9PHAE)

HSP 1 Score: 530 bits (1364), Expect = 4.410e-183
Identity = 259/295 (87.80%), Postives = 276/295 (93.56%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGGGSNAALPRAKMESGEAEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQEFKLSSGKKKHGIIFME 887
            LVNN++WL QLSYLDFLR+YGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRR GCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSA+GAVWLN+D L  YDYWQFWRNTDDADVIRFLKLFTEL MDE+  LE+LTGAGIN+AKIVLADE TKLLHGE CL+EIH+T+KQ+F GG GGSNAALPRAK+ES EAEAG+ VVDLF+RLELAKTKSEVRRLIKGGGAKLN +KIVDEGFVVD STFDG  E KLSSGKK+HGIIFME
Sbjct:  196 LVNNNEWLNQLSYLDFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSAAGAVWLNADKLPEYDYWQFWRNTDDADVIRFLKLFTELSMDEVHKLEQLTGAGINKAKIVLADETTKLLHGEACLKEIHQTVKQVFAGGVGGSNAALPRAKIESAEAEAGMAVVDLFIRLELAKTKSEVRRLIKGGGAKLNDQKIVDEGFVVDLSTFDGKDELKLSSGKKRHGIIFME 490
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A835Z418_9STRA (Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z418_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 5.590e-139
Identity = 205/293 (69.97%), Postives = 240/293 (81.91%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLF-VGGGGGSNAALPRAKMESGEAEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQEFKLSSGKKKHGII 878
            LV+ND+WL  L Y+ FLR+YGP+FTINRM+++DSVRLRLEREQPLTFLEFNYMLLQAYDF EL++R GC LQMGGSDQWGNMVNGV+LGRR   AEL+ALTAPLITTS+G+KMGKSA+GAVWLN+D L  YDYWQFWRNTDDADV RFLKLFTEL ++ I+ LEKL G  IN AKIVLADEAT++LHGE CL+ I  T KQLF  G  GGSNA+LPR  +   E +AG+ V+DL+++  LA +K EVRRLIKGGGAK+N  K+ DE  VV  + F GG E KLSSGKKKH I+
Sbjct:  211 LVDNDEWLSSLGYIQFLREYGPYFTINRMLSFDSVRLRLEREQPLTFLEFNYMLLQAYDFVELHKRYGCSLQMGGSDQWGNMVNGVELGRRTAGAELYALTAPLITTSDGRKMGKSAAGAVWLNADRLPPYDYWQFWRNTDDADVARFLKLFTELPLERIAELEKLEGKDINAAKIVLADEATRMLHGEHCLESIRATAKQLFEAGAAGGSNASLPRTSVSQSEVDAGLSVLDLYVKAGLAASKGEVRRLIKGGGAKINDVKVDDELQVVGAAEFAGG-ELKLSSGKKKHAIV 502
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A7S2XYP8_9STRA (Tyrosine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYP8_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 1.820e-133
Identity = 191/292 (65.41%), Postives = 236/292 (80.82%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGGGSNAALPRAKMESGEAEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQEFKLSSGKKKHGII 878
            LVNND+WL  L YL FLRDYGP+FTINRMM Y+SV++RL+REQPLTFLEFNYM+LQAYDF EL RR  C+LQ+GGSDQWGN+VNG DL R+ ++  ++ LTAPLITTS+GKKMGK+A+GA+WLN + LS Y+YWQFWRNT+DADV RFLKLFTEL ++EI  L  + GA IN+AK+VLADEAT++LHG +CL  IH+T++ +F G G  SN+AL   ++   E +AGI VVDL+M+L + KTKSE RRLIKGGGA+LN EKI +E  V+    FD  Q+ KLSSGKKKHGII
Sbjct:  207 LVNNDEWLSPLQYLQFLRDYGPYFTINRMMNYESVKVRLDREQPLTFLEFNYMILQAYDFLELRRRHDCILQLGGSDQWGNIVNGCDLNRKADQHTVYGLTAPLITTSDGKKMGKTANGAMWLNKEKLSEYEYWQFWRNTNDADVARFLKLFTELSLEEIDKLTNVEGAAINQAKVVLADEATRMLHGADCLPAIHDTVQSMFAGKGK-SNSALQTVEVSQAEVDAGIPVVDLYMKLGMTKTKSEGRRLIKGGGARLNDEKITEEHLVILPEVFDEDQQIKLSSGKKKHGII 497
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A7S3C400_9EUKA (Tyrosine--tRNA ligase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C400_9EUKA)

HSP 1 Score: 399 bits (1026), Expect = 5.680e-133
Identity = 192/293 (65.53%), Postives = 233/293 (79.52%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGGGSN-AALPRAKMESGEAEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQEFKLSSGKKKHGII 878
            LVNND+WL  L YLDFLRDYG HFTINRM++++SV+ RL RE PL+FLEFNYM+LQAYDF EL RR    LQ GGSDQWGN+VNGV+L RRV++ +++  TAPL+TTS+GKKMGK+A GAVWLN+D+LS YDYWQFWRNT DADV RFL++FTEL  ++I  +EKL GA INEAK +LADEAT+LLHGEECL +I ET + LF  GG  S+ +ALPR ++   E   G+ V+DLF+RLEL K+KSEVRRL+ GGGA+LNGEKI D   V+D   F    E KLSSGKKKHGI+
Sbjct:  122 LVNNDEWLSSLQYLDFLRDYGRHFTINRMLSFESVKQRLARESPLSFLEFNYMILQAYDFLELSRRMDVKLQFGGSDQWGNIVNGVELARRVDRRQVYGFTAPLLTTSDGKKMGKTADGAVWLNADLLSPYDYWQFWRNTADADVGRFLRIFTELPKEKIEAMEKLDGAAINEAKAILADEATRLLHGEECLDQIRETARTLFSTGGDASDTSALPRIQITPDEVAEGVGVIDLFIRLELGKSKSEVRRLVTGGGARLNGEKIEDAALVLDAEVFSESDEVKLSSGKKKHGIV 414
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: W7T7T0_9STRA (Tyrosine--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7T0_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 3.770e-132
Identity = 193/293 (65.87%), Postives = 238/293 (81.23%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGGGSNAALPRAKMESGE-AEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQEFKLSSGKKKHGII 878
            LVNND+WL  L YLDFLRDYG HFTINRM+ ++SV++RL+RE PL+FLEFNYM+LQAYDF EL RR    LQ+GGSDQWGN++NGV+L R+V+   LF LTAPL+TTS+GKKMGK+ASGAVWL  ++LS YDYWQFWRNT+DADV RFLKLFTE+ +++I  L +L GAGINEAK++LADEATKLLHGEECL+EIH T+  LF GG     AALPR  +   E  +AG+ V +LF+RL+LAK+K+E RRLIKGGGA+LNGE+I +E FVV   +FD   E  LS+GKKKHG++
Sbjct:  246 LVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFDK-PEIMLSAGKKKHGMV 537
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A8J6C8V9_DIALT (Tyrosine--tRNA ligase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C8V9_DIALT)

HSP 1 Score: 391 bits (1004), Expect = 2.550e-129
Identity = 193/300 (64.33%), Postives = 231/300 (77.00%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGG----GSNAA----LPRAKMESGEAEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQEFKLSSGKKKHGII 878
            LVNND+WL QL  L FLRDYG +FTINRM+T++SV+ RL REQPLTFLEFNYM+ QAYDF EL RR GC LQMGGSDQWGN+++GV+LGRR + A LFA+TAPLITT++GKKMGKS  GAVWLN D+L  YDYWQFWRNTDDADV+RFL+LFTEL  + I+ L +L GA INEAK+VLADEAT++LHG+ CL  I +T  QLF  GGG    GS  A    LP   +   E + GI VV+LF++L  AK+KSEVRRLI  GGA+LN EK++DE  VV    F  GQ  K+SSGKKKHG++
Sbjct:  139 LVNNDEWLGQLRLLPFLRDYGRYFTINRMLTFESVKQRLGREQPLTFLEFNYMIFQAYDFLELSRRYGCRLQMGGSDQWGNIISGVELGRRADDASLFAVTAPLITTADGKKMGKSLGGAVWLNEDLLPPYDYWQFWRNTDDADVVRFLRLFTELSDERIAELAQLEGAAINEAKVVLADEATRMLHGDGCLAAIRQTAAQLFTNGGGXXXVGSGGADMGTLPTVAVSRAELDGGITVVELFLKLNFAKSKSEVRRLIAAGGARLNDEKVIDEALVVGSGAFADGQ-LKVSSGKKKHGLV 437
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A7S0LKU6_9EUKA (Tyrosine--tRNA ligase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKU6_9EUKA)

HSP 1 Score: 392 bits (1006), Expect = 3.730e-129
Identity = 186/297 (62.63%), Postives = 235/297 (79.12%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGGGS---NAALPRAKMESGEAEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQ--EFKLSSGKKKHGII 878
            LVNND WL  L YL+FLRDYG HFTINRM++++SV+ RLERE PL+FLEFNYM+LQAYDF EL+RR G VLQ GGSDQWGN++NGV+LGRRV+ A L+ LTAPL+ T++GKKMGK+ASGAVWLN ++LS ++YWQFWRNT D+DV RFL++FTEL   EI  LE L+GA +N+AK+VLA+EAT++LHG ECL++I +T   LF GGG G      ALPR K+ S +   G+ ++DLF+RLEL K+KSE+RRL+ GGGAKLN  K+ D   +V   TF G +  E KLS+GKKKHGI+
Sbjct:  175 LVNNDDWLSPLKYLEFLRDYGRHFTINRMLSFESVKQRLERESPLSFLEFNYMILQAYDFLELHRREGAVLQFGGSDQWGNIINGVELGRRVDGASLYGLTAPLLATADGKKMGKTASGAVWLNEELLSPFEYWQFWRNTADSDVGRFLRIFTELPQGEIEKLESLSGAAVNDAKVVLANEATRMLHGAECLEQIQQTAASLFGGGGAGGAGDTEALPRVKVSSSDLAEGVPLIDLFLRLELGKSKSEIRRLVTGGGAKLNDVKVEDAALLVTPETFAGREMGEIKLSAGKKKHGIV 471
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A4D9CNM3_9STRA (Tyrosine--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNM3_9STRA)

HSP 1 Score: 401 bits (1031), Expect = 2.750e-128
Identity = 194/293 (66.21%), Postives = 238/293 (81.23%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGGGSNAALPRAKMESGE-AEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQEFKLSSGKKKHGII 878
            LVNND+WL  L YLDFLRDYG HFTINRM+ ++SV++RL+RE PL+FLEFNYM+LQAYDF EL RR    LQ+GGSDQWGN++NGV+L R+V+   LF LTAPL+TTS+GKKMGK+ASGAVWL  ++LS YDYWQFWRNT+DADV RFLKLFTE+ +++I  L +L GAGINEAK++LADEATKLLHGEECL+EIH T+  LF GG     AALPR  +   E  +AG+ V +LF+RL+LAK+K+E RRLIKGGGA+LNGE+I +E FVV   +FD   E  LS+GKKKHG+I
Sbjct:  550 LVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIVELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFDK-PEIMLSAGKKKHGMI 841
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A7S2W1R9_9STRA (Tyrosine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1R9_9STRA)

HSP 1 Score: 384 bits (985), Expect = 2.330e-125
Identity = 187/296 (63.18%), Postives = 230/296 (77.70%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGGGSN--AALPRAKMESGEAEAGIV-VVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGG-QEFKLSSGKKKHGII 878
            LVNND WL  L YL+FLRD+G  FTINRMMTYDSVRLRLEREQPLTFLEFNYM+LQAYDF EL RR GC LQ GGSDQWGN+VNG++L R+V++ ++F +TAPLITTS+GKKMGKSA GA+WLN D+LS YDYWQFWRNT DADV RFLK+FTEL ++++S L  L GA IN+AK+VLADE T++LHGEECL  I ET K +F  GG  +   + LPR ++   + E G + + D+   L LAK+K+E RRLIKGGG ++NGEKI DE  V+  +       +F++SSGKKKHGI+
Sbjct:  220 LVNNDDWLSSLKYLEFLRDFGTQFTINRMMTYDSVRLRLEREQPLTFLEFNYMILQAYDFLELSRRQGCSLQFGGSDQWGNIVNGIELTRKVDQKQVFGMTAPLITTSDGKKMGKSADGAIWLNPDLLSPYDYWQFWRNTADADVERFLKIFTELPLEQVSELAALQGAAINDAKVVLADECTRMLHGEECLAGIKETAKSVFASGGASAENMSDLPRHEISRTDFEQGALQIADVMTALGLAKSKAEARRLIKGGGGRINGEKIEDEFLVLSPAALGAEVSDFRVSSGKKKHGIV 515
[Close]
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Match: A0A7S2CQP3_9STRA (Tyrosine--tRNA ligase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQP3_9STRA)

HSP 1 Score: 382 bits (981), Expect = 4.260e-125
Identity = 185/293 (63.14%), Postives = 226/293 (77.13%), Query Frame = 3 
Query:    3 LVNNDQWLQQLSYLDFLRDYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDMLSSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVLADEATKLLHGEECLQEIHETIKQLFVGGGGGSNAA-LPRAKMESGEAEAGIVVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQEFKLSSGKKKHGII 878
            +VNND+WL  L YL+FLRDYGPHFTINRM+T+DSVRLRLEREQPLT LEFNYM+ QAYDF EL RR  C +Q GGSDQWGN++NGV+L RRV+   +F +TAPLITTS+G+KMGKSASGAVWLN+D+LS YDYWQFWRNT+D+DV RFL+LFT+L MDEI+ LE L GA INEAK+VLADE T LLHG ECL+ I  T   LF  G    +   LPR  + + E E G  VVDL + L+LA +KSE RR IKGGGA+++G KI DE   ++ +  +   + +LS GKK+HGI+
Sbjct:  199 IVNNDEWLSDLKYLEFLRDYGPHFTINRMLTFDSVRLRLEREQPLTLLEFNYMIFQAYDFLELNRRYSCTVQFGGSDQWGNIINGVELNRRVDGNAVFGVTAPLITTSDGRKMGKSASGAVWLNADLLSPYDYWQFWRNTEDSDVGRFLRLFTDLSMDEIAKLEVLEGAAINEAKVVLADECTGLLHGVECLESIKATAASLFDKGASEDSVDDLPRIFVSTSEVEEGKFVVDLLVALKLASSKSEARRSIKGGGARIDGNKIEDEKMQLESADLEVSSQVRLSVGKKRHGIV 491
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8339.19477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L673_9PHAE4.410e-18387.80Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z418_9STRA5.590e-13969.97Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2XYP8_9STRA1.820e-13365.41Tyrosine--tRNA ligase n=1 Tax=Fibrocapsa japonica ... [more]
A0A7S3C400_9EUKA5.680e-13365.53Tyrosine--tRNA ligase n=1 Tax=Haptolina ericina Ta... [more]
W7T7T0_9STRA3.770e-13265.87Tyrosine--tRNA ligase n=1 Tax=Nannochloropsis gadi... [more]
A0A8J6C8V9_DIALT2.550e-12964.33Tyrosine--tRNA ligase n=1 Tax=Diacronema lutheri T... [more]
A0A7S0LKU6_9EUKA3.730e-12962.63Tyrosine--tRNA ligase n=1 Tax=Coccolithus braarudi... [more]
A0A4D9CNM3_9STRA2.750e-12866.21Tyrosine--tRNA ligase n=1 Tax=Nannochloropsis sali... [more]
A0A7S2W1R9_9STRA2.330e-12563.18Tyrosine--tRNA ligase n=1 Tax=Rhizochromulina mari... [more]
A0A7S2CQP3_9STRA4.260e-12563.14Tyrosine--tRNA ligase n=2 Tax=Dictyocha speculum T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8339contigM-pyrifera_M_contig8339:5052..7748 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score473.0
Seed ortholog evalue9.2e-131
Seed eggNOG ortholog2880.D8LPN5
Preferred nameMSY1
KEGG rclassRC00055,RC00523
KEGG koko:K01866
KEGG ReactionR02918
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000166,GO:0000372,GO:0000375,GO:0000376,GO:0000959,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004831,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0030554,GO:0031323,GO:0031325,GO:0031974,GO:0032543,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033120,GO:0034337,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0061635,GO:0065007,GO:0065008,GO:0070013,GO:0070127,GO:0070184,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140053,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.tyrosyl-tRNA aminoacylation
EggNOG OGsCOG0162@1,KOG2623@2759
Ec32 ortholog descriptionTyrosyl-tRNA synthetase
Ec32 orthologEc-18_001870.1
EC6.1.1.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Exons5
Model size1431
Cds size804
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.9580867-UTR-M-pyrifera_M_contig8339:5051..55921622816740.9580867-UTR-M-pyrifera_M_contig8339:5051..5592Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8339 5052..5592 -
1692278150.5664232-UTR-M-pyrifera_M_contig8339:5051..55921692278150.5664232-UTR-M-pyrifera_M_contig8339:5051..5592Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8339 5052..5592 -
1622816741.0376675-UTR-M-pyrifera_M_contig8339:7662..77481622816741.0376675-UTR-M-pyrifera_M_contig8339:7662..7748Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8339 7663..7748 -
1692278150.6396718-UTR-M-pyrifera_M_contig8339:7662..77481692278150.6396718-UTR-M-pyrifera_M_contig8339:7662..7748Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8339 7663..7748 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.9710195-CDS-M-pyrifera_M_contig8339:5592..58331622816740.9710195-CDS-M-pyrifera_M_contig8339:5592..5833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 5593..5833 -
1692278150.5889199-CDS-M-pyrifera_M_contig8339:5592..58331692278150.5889199-CDS-M-pyrifera_M_contig8339:5592..5833Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 5593..5833 -
1622816740.9878492-CDS-M-pyrifera_M_contig8339:5958..60801622816740.9878492-CDS-M-pyrifera_M_contig8339:5958..6080Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 5959..6080 -
1692278150.6004298-CDS-M-pyrifera_M_contig8339:5958..60801692278150.6004298-CDS-M-pyrifera_M_contig8339:5958..6080Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 5959..6080 -
1622816740.9994729-CDS-M-pyrifera_M_contig8339:6386..65061622816740.9994729-CDS-M-pyrifera_M_contig8339:6386..6506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 6387..6506 -
1692278150.6100862-CDS-M-pyrifera_M_contig8339:6386..65061692278150.6100862-CDS-M-pyrifera_M_contig8339:6386..6506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 6387..6506 -
1622816741.0111573-CDS-M-pyrifera_M_contig8339:6680..68821622816741.0111573-CDS-M-pyrifera_M_contig8339:6680..6882Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 6681..6882 -
1692278150.619459-CDS-M-pyrifera_M_contig8339:6680..68821692278150.619459-CDS-M-pyrifera_M_contig8339:6680..6882Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 6681..6882 -
1622816741.0243604-CDS-M-pyrifera_M_contig8339:7543..76621622816741.0243604-CDS-M-pyrifera_M_contig8339:7543..7662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 7544..7662 -
1692278150.6293974-CDS-M-pyrifera_M_contig8339:7543..76621692278150.6293974-CDS-M-pyrifera_M_contig8339:7543..7662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8339 7544..7662 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8339.19477.1prot_M-pyrifera_M_contig8339.19477.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8339 5593..7662 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8339.19477.1

>prot_M-pyrifera_M_contig8339.19477.1 ID=prot_M-pyrifera_M_contig8339.19477.1|Name=mRNA_M-pyrifera_M_contig8339.19477.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=268bp
MMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRCGCVLQMGGSDQ
WGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSASGAVWLNSDML
SSYDYWQFWRNTDDADVIRFLKLFTELQMDEISNLEKLTGAGINEAKIVL
ADEATKLLHGEECLQEIHETIKQLFVGGGGGSNAALPRAKMESGEAEAGI
VVVDLFMRLELAKTKSEVRRLIKGGGAKLNGEKIVDEGFVVDRSTFDGGQ
EFKLSSGKKKHGIIFME*
back to top

mRNA from alignment at M-pyrifera_M_contig8339:5052..7748-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8339.19477.1 ID=mRNA_M-pyrifera_M_contig8339.19477.1|Name=mRNA_M-pyrifera_M_contig8339.19477.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2697bp|location=Sequence derived from alignment at M-pyrifera_M_contig8339:5052..7748- (Macrocystis pyrifera P11B4 male)
AGCTAGTGAACAACGACCAGTGGTTGCAACAGCTGTCGTACCTCGACTTT
CTTCGGGATTACGGTCCTCACTTCACCATCAACCGCATGATGACATACGA
CAGCGTGCGGTTAAGATTGGAACGCGAGCAGCCCCTAACCTTCTTGGAAT
TCAACTACATGCTGCTACAGGCATACGACTTCACCGAGCTCTACCGTCGA
TGCGGGTGAGACGCCATCGCTATGATACGCACCGAGGTCAAAGAGATGTT
CAAACAGTGGTGGGTAGTGCTGATGTAATGAGACATATCAAGCAAGAAGA
CACCCAATAGTTGCCAATGCAGTTGTTGTCATTGTCGGTATTGCCGTGTT
GCATGCGAGGTGCGCCAACGATGTGAGCCACTAATGGAATTGACCACATG
TGTGGGATCATTTGTTTCTCGCCGAAACTGTGTGTAAAGTGTGAAAGTAG
CAACGACAGCCGTCGACTCTGCTCCTTGATTTCCTAGCTGAAGGTAATAC
GAGTCAGCTCCTGGGGAATCAAATGCGCCACGTACGAAATGGGGCATGTA
GCTCGCCCAGGTGCAGTTCAAGACCAAGAGGAAGAAAACAGATGTGCTAT
CCCGCTATAATCCTGCTTTCTGAAAATATCCTCTAGAACGTCATAGCTCG
TAGGCACCTTTGTTATACTCGTTTTTGGTTTCCATGCTTTTTGTAGCCTT
CCACCCTTGATCGGCAAGGAGTGACGTAAGGAAAATAATCATTAATTGCT
GTGCTACGGACTGAGGATGGCTGAGGATGGCTGACAGTTGCGCGGGGTGA
ATATAGATGAGCCTACCCTGAATTTAACGTACCAGCGCGTGACCTTTCGT
TTCGGCTCGCTGTTAGGTGTGTACTACAGATGGGCGGTTCCGACCAATGG
GGCAATATGGTCAACGGAGTTGATTTAGGGCGACGAGTTGAGAAGGCAGA
GCTGTTTGCTCTAACTGCTCCTCTGATCACTACATCCGAGGGCAAAAAAA
TGGGCAAGTCGGCTTCTGGCGCTGTGTGGTTAAACTCTGACATGCTTTCG
TCGTACGACTACTGGCAGGTAAGCTATTCGTTTAGTGTTGAGAGGGGGAG
AATCAATATGGTCCCCACGAACGTTGCACCATTAACATGTACCGTAGTAC
GTACCAAGCTCTGTTTAGATGCTTGCATGTATGTGTGTTTGCCGTCGTCC
AGTCTATATCCTGATCCAAGTTCTTGACTGCAACATTCACAGTTCTGGCG
GAATACCGACGACGCTGACGTCATCCGCTTTCTGAAGCTCTTCACCGAGT
TGCAGATGGATGAAATAAGCAATTTGGAGAAGCTCACAGGGGCGGGAATC
AACGAGGCCAAGGTCAGTGGTAAAATCTAGAGTAGGATGGTCATAAACCG
CCAAAGATATTCGAGGCGCGTTTAAGTAGCGTCCGGTTACTTGGATGTTT
ACGTGACGGGGATGGATGATGGCTGAAGCTGGATTCAACCAGAGCTCCCA
CGAAGTACAGAACTTGGGCGGCGAAACGAAACCTCGTGAATGCCTCAGGA
GATATGAGCACCACAGTGGCACACCTTGGGGATATGAGACTCTCGGCGAC
TAACGCTGCCCCCGTTGCTCATGTATGCTTGTTTGGCCCGCGCATATTCT
TGTCTGCACCTTGTTCAGATTGTGCTCGCAGACGAAGCAACCAAATTGCT
CCATGGCGAAGAATGCTTACAAGAGATTCATGAGACGATCAAGCAGTTGT
TCGTTGGTGGGGGTGGAGGATCGAATGCTGCTCTCCCCAGGTAACGTAAC
GATGCGAGATATGTGGCGTACCCAAGTGCCACCTGGTTGATTTTTTCATG
CATTTTCATTGCTTAGGGTATCGCAACATCCTCACACGCAACACCGTTGT
TGCGTCGTATTGCAGAGCGAAAATGGAAAGCGGTGAGGCTGAAGCCGGCA
TCGTAGTTGTCGATCTTTTCATGCGCTTGGAGCTTGCAAAGACGAAGAGC
GAGGTACGGAGACTCATCAAGGGAGGCGGCGCGAAGCTTAACGGCGAAAA
GATCGTGGACGAGGGTTTTGTAGTTGACCGGTCTACCTTCGACGGCGGTC
AAGAGTTCAAGCTCTCCAGTGGGAAGAAAAAGCACGGCATTATTTTCATG
GAGTGAAGCCTAGAATGCCAACTAAAATACCAGTCGAAGTGTCACACGAC
AACAGCTTACTGTAAAAAGATGCACGGGCGACTTCCAAACTACAATGAAA
GGAGTCGTGCGACACGGGCAGCTGAGCGGCGCTCACACATAATACCATGA
AAGGAATGGTGCGACACGGGCAGCTGAGCGGCGCGCTCACACAAATAGTG
CCAGTCGTATATAAACAAGGTTTTGGCGCCTGAGGACGCTCGCTCATTGA
AGCGAGCCCAGACAGAGGCCTGGTATTGGTGGGCAAGGACGTGCGTACGC
GGGCAGCTCAACAGTAAGCGAATGCAAAACGCCAAAACGCCACCACCGGG
CTTGCATCTGGGCATCGTAGGGGGCGCTATGTGCTGGATGGGTAGACGCG
GGCACAACGCTTTCGTGTTACGTAGAAAAAAACTGAAATTAATATCTCTG
TCCAACCTTAAGTGGTAACACCTAGGGATTAGCAGGGCACCGCATATGGG
CCTGTTCAGTATAATAGTATTAAAACACAACGTCATTATTGGCCGCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8339:5052..7748-

>mRNA_M-pyrifera_M_contig8339.19477.1 ID=mRNA_M-pyrifera_M_contig8339.19477.1|Name=mRNA_M-pyrifera_M_contig8339.19477.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1608bp|location=Sequence derived from alignment at M-pyrifera_M_contig8339:5052..7748- (Macrocystis pyrifera P11B4 male)
ATGATGACATACGACAGCGTGCGGTTAAGATTGGAACGCGAGCAGCCCCT
AACCTTCTTGGAATTCAACTACATGCTGCTACAGGCATACGACTTCACCG
AGCTCTACCGTCGATGCGGATGATGACATACGACAGCGTGCGGTTAAGAT
TGGAACGCGAGCAGCCCCTAACCTTCTTGGAATTCAACTACATGCTGCTA
CAGGCATACGACTTCACCGAGCTCTACCGTCGATGCGGGTGTGTACTACA
GATGGGCGGTTCCGACCAATGGGGCAATATGGTCAACGGAGTTGATTTAG
GGCGACGAGTTGAGAAGGCAGAGCTGTTTGCTCTAACTGCTCCTCTGATC
ACTACATCCGAGGGCAAAAAAATGGGCAAGTCGGCTTCTGGCGCTGTGTG
GTTAAACTCTGACATGCTTTCGTCGTACGACTACTGGCAGGTGTGTACTA
CAGATGGGCGGTTCCGACCAATGGGGCAATATGGTCAACGGAGTTGATTT
AGGGCGACGAGTTGAGAAGGCAGAGCTGTTTGCTCTAACTGCTCCTCTGA
TCACTACATCCGAGGGCAAAAAAATGGGCAAGTCGGCTTCTGGCGCTGTG
TGGTTAAACTCTGACATGCTTTCGTCGTACGACTACTGGCAGTTCTGGCG
GAATACCGACGACGCTGACGTCATCCGCTTTCTGAAGCTCTTCACCGAGT
TGCAGATGGATGAAATAAGCAATTTGGAGAAGCTCACAGGGGCGGGAATC
AACGAGGCCAAGTTCTGGCGGAATACCGACGACGCTGACGTCATCCGCTT
TCTGAAGCTCTTCACCGAGTTGCAGATGGATGAAATAAGCAATTTGGAGA
AGCTCACAGGGGCGGGAATCAACGAGGCCAAGATTGTGCTCGCAGACGAA
GCAACCAAATTGCTCCATGGCGAAGAATGCTTACAAGAGATTCATGAGAC
GATCAAGCAGTTGTTCGTTGGTGGGGGTGGAGGATCGAATGCTGCTCTCC
CCAGATTGTGCTCGCAGACGAAGCAACCAAATTGCTCCATGGCGAAGAAT
GCTTACAAGAGATTCATGAGACGATCAAGCAGTTGTTCGTTGGTGGGGGT
GGAGGATCGAATGCTGCTCTCCCCAGAGCGAAAATGGAAAGCGGTGAGGC
TGAAGCCGGCATCGTAGTTGTCGATCTTTTCATGCGCTTGGAGCTTGCAA
AGACGAAGAGCGAGGTACGGAGACTCATCAAGGGAGGCGGCGCGAAGCTT
AACGGCGAAAAGATCGTGGACGAGGGTTTTGTAGTTGACCGGTCTACCTT
CGACGGCGGTCAAGAGTTCAAGCTCTCCAGTGGGAAGAAAAAGCACGGCA
TTATTTTCATGGAGTGAAGCGAAAATGGAAAGCGGTGAGGCTGAAGCCGG
CATCGTAGTTGTCGATCTTTTCATGCGCTTGGAGCTTGCAAAGACGAAGA
GCGAGGTACGGAGACTCATCAAGGGAGGCGGCGCGAAGCTTAACGGCGAA
AAGATCGTGGACGAGGGTTTTGTAGTTGACCGGTCTACCTTCGACGGCGG
TCAAGAGTTCAAGCTCTCCAGTGGGAAGAAAAAGCACGGCATTATTTTCA
TGGAGTGA
back to top