mRNA_M-pyrifera_M_contig83380.19473.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83380.19473.1
Unique NamemRNA_M-pyrifera_M_contig83380.19473.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A0A4Q5XGV2_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q5XGV2_9DELT)

HSP 1 Score: 300 bits (769), Expect = 6.790e-96
Identity = 156/295 (52.88%), Postives = 196/295 (66.44%), Query Frame = 1
Query:    1 CFGDGAHGALGQNTTDDIGASNIPSDFPPVDVGADVMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLGDKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGY 885
            C+G  A   LG   +++IG +  P+    VDVG  V+Q AA  QH C ++ GG+V+CWG G  G+LGYGNTD+IGDDE P++ G VDVGG+V Q+ TG   +CALL  G++RCWG GG G LGY N   IG      PA  GDVDVGGTV+ IA G+ H C LL+ GNVRCWG    G +GYGNT  IGD E PASAGD++IGG V AL  G   +CALL +  VRCWG   +G LGYGNT+N+GD+E PA AG+V++G      ++ G   TCAL+  G V+CWG+G    LGY
Sbjct:  186 CWGVAAE--LGYGNSNNIGDTETPASAGDVDVGGKVIQLAASEQHTCALLVGGTVRCWGWGGYGELGYGNTDNIGDDETPASAGDVDVGGKVAQIATGSEMSCALLSTGALRCWGLGGTGGLGYGNQLDIGDNE--TPASAGDVDVGGTVMQIAAGSSHACVLLSTGNVRCWGEAHDGRIGYGNTVRIGDDETPASAGDLDIGGKVQALALGGAHSCALLVDGKVRCWGAWNFGSLGYGNTDNVGDDETPAMAGNVDVGGPVKQ-LAAGGDRTCALLTNGAVRCWGAGVLSILGY 475          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A0A0C1ZJ98_9DELT (Molybdopterin oxidoreductase, iron-sulfur binding subunit n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C1ZJ98_9DELT)

HSP 1 Score: 298 bits (764), Expect = 2.120e-93
Identity = 158/295 (53.56%), Postives = 188/295 (63.73%), Query Frame = 1
Query:    1 CFGDGAHGALGQNTTDDIGASNIPSDFPPVDVGADVMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLGDKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGY 885
            C+G+G  G LG     DIG +  P     V +G DV+Q   G  H CV++  G V+CWG+   G LGYG+ + IGDDE     G V+VGG V+Q+  G  HTCALL  G+VRCWG G  G  GY N   IG     +P+  GDVDVGG V  +  G  HTCALL  G VRCWG G  GVLGYGN   IGD E PASAGDV+IGG VV L  G    CALL   +VRCWGR  +G LGYG+T +IGD+E PASAGD+ LG    T +SVG +HTCAL+EGG V+CWG   YG+LGY
Sbjct:  284 CWGEGWGGKLGYGNISDIGDNEYPFAAGDVALGGDVVQLDGGDDHSCVLLDTGGVRCWGNNLDGLLGYGHVEPIGDDEPGGTGGDVEVGGAVIQLAAGGLHTCALLDTGAVRCWGGGFYGSPGYGNKETIGDDE--LPSSVGDVDVGGVVTQLRAGYAHTCALLDSGAVRCWGVGWDGVLGYGNEAWIGDDEVPASAGDVDIGGVVVDLTLGLSHTCALLDTGAVRCWGRNEFGQLGYGHTMDIGDDEAPASAGDIELG-AAATQVSVGREHTCALLEGGTVRCWGRNNYGQLGY 575          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A0A7X7JKE0_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7JKE0_9DELT)

HSP 1 Score: 289 bits (739), Expect = 5.290e-93
Identity = 141/256 (55.08%), Postives = 175/256 (68.36%), Query Frame = 1
Query:    1 CFGDGAHGALGQNTTDDIGASNIPSDFPPVDVGADVMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDV 768
            C+G G +G LG   T+++G +N P++   V+VG  V+Q  AG  H C ++ GG V+CWGSGS+GKLGYGNT+D+G    P+ VG V VG  VVQ+  G  HTCALL +G+VRCWG+G  GRLGY NT  +     +VPA  GDV+VGG VV IA G +HTCALL  GNVRCWG G  G LGYGNT  +GD E PA AGDV +GG V  +  G    CALL+N ++RCWG+GT G LGYGNT  +G  + PA AGDV
Sbjct:  120 CWGSGLNGRLGYGNTENVGETNTPAEAGDVNVGGKVVQVVAGSAHTCALLVGGDVRCWGSGSAGKLGYGNTEDVGATNEPADVGDVAVGSPVVQIAAGVSHTCALLTDGNVRCWGSGAYGRLGYGNTEDV-----SVPADVGDVNVGGRVVQIAAGDWHTCALLANGNVRCWGAGDDGRLGYGNTSMVGDDETPADAGDVNVGGTVTQIAVGQDHTCALLTNGNIRCWGKGTSGALGYGNTLRVGATDTPADAGDV 370          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A6FXK1_9DELT (Regulator of chromosome condensation, RCC1 n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6FXK1_9DELT)

HSP 1 Score: 291 bits (744), Expect = 9.840e-92
Identity = 148/296 (50.00%), Postives = 182/296 (61.49%), Query Frame = 1
Query:    1 CFGDGAHGALGQNTTDDIGASNIPSDFPPVDVGADVMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLGDKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGYG 888
            C+G    G LG   TD IG +  P+    VD+G   +   AG ++ C V+ GG+V+CWG G+ G+LGY NTD IGDDE P++ G VDVGG  +    G  H CA+L  G VRCWG G  GRLGYAN   IG      PA  GDVDVGG+   +++GA+H+CALL  G+VRCWG   FG LGY N + IGD E PASAG V +GG  V L  G    CA+L     RCWG G+ G LGY NT+ +GDNE PA  GD+ +G      IS G +HTCA+   G V+CWG G  G LGYG
Sbjct:  221 CWGANGSGQLGYGNTDTIGDNETPASAGTVDLGGPAISVGAGNEYTCAVLEGGAVRCWGLGTLGRLGYANTDTIGDDESPASAGDVDVGGNALTFSAGFDHGCAMLEGGGVRCWGRGEDGRLGYANQDNIGDDE--TPASAGDVDVGGSAQVVSVGAFHSCALLQGGDVRCWGNAGFGKLGYANANDIGDNEAPASAGPVNLGGDAVHLDLGGQHTCAVLQGGGARCWGIGSNGRLGYANTQVVGDNETPADVGDIVVG-ADVFQISGGYEHTCAVTTMGTVRCWGKGASGRLGYG 513          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A0A850GDE8_9DELT (Uncharacterized protein n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850GDE8_9DELT)

HSP 1 Score: 290 bits (742), Expect = 4.950e-91
Identity = 152/295 (51.53%), Postives = 181/295 (61.36%), Query Frame = 1
Query:    1 CFGDGAHGALGQNTTDDIGASNIPSDFPPVDVGADVMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLGDKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGY 885
            C+G G  GALG   T  IG    P++   V +G   +  +AG  H C  +  G ++CWGS   G+LGYGNT  IG+   P   G V VGG V+ +  G  HTCALL  GSVRCWG    G+LGYANT  +G      P   GDVDVGG V  IA G  HTCALL  G VRCWG  + G LGY N+ SIGD E PA AGDV++GG  V +  G    CALL   +VRCWGRG +G  GYG+ ENIGD+E PASAGDV +G      ++ G QHTCALM GG V+CWG+G  G LGY
Sbjct:  198 CWGHGFDGALGYGNTTTIGDDETPAEVGDVALGGLAIDVSAGGFHSCARLDDGGLRCWGSADYGQLGYGNTLAIGEGLTPDWAGDVPVGGPVIDITAGSTHTCALLEGGSVRCWGRSLSGQLGYANTLSVGDDE--TPEEIGDVDVGGVVTQIAAGTTHTCALLEGGGVRCWGSASQGKLGYANSQSIGDDETPAEAGDVQLGGAAVQVVAGGNHTCALLEGGAVRCWGRGGFGATGYGDGENIGDDETPASAGDVPIGGTA-VQLTAGYQHTCALMSGGAVRCWGNGGQGRLGY 489          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A0A7W1K6U9_9ACTN (Chromosome condensation regulator (Fragment) n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W1K6U9_9ACTN)

HSP 1 Score: 285 bits (728), Expect = 1.480e-90
Identity = 150/296 (50.68%), Postives = 182/296 (61.49%), Query Frame = 1
Query:    1 CFGDGAHGALGQNTTDDIGASNIPSDFPPVDVGADVMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLG-DKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGY 885
            C+G   +G LG    + IG    P    PV +G      +AG  H C V+   SV+CWG G+ G+LGY N   IGDDE P + G V +GG    +  GR HTCALL  GSV CWG G  GRLGYANT  IG      P   G VD+GG   +I+ G  HTCALL  G+VRCWG G  G LGY NT++IGD E P SAG V +GG V A+  GD  +CALL N SVRCWG G +G LGY +T N+GD+E P S   V+LG  +   AIS G +HTCA ++ G V+CWGSGF G+LGY
Sbjct:  120 CWGFSGNGRLGYANPNTIGDDETPGSAGPVALGGPAQAISAGGGHSCAVLGDASVRCWGFGNDGRLGYANPRTIGDDETPGSAGPVALGGAARAISAGRDHTCALLDGGSVLCWGLGDNGRLGYANTTTIGRDQ--TPESVGPVDLGGPAQAISAGHGHTCALLEDGSVRCWGYGGNGELGYANTNTIGDNEVPGSAGPVALGGPVKAISAGDAHSCALLENGSVRCWGYGQHGRLGYASTNNVGDDETPGSVEPVDLGAGRTAVAISAGGRHTCARLDDGGVRCWGSGFTGQLGY 413          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A0A3M1IFY5_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A3M1IFY5_9BACT)

HSP 1 Score: 294 bits (752), Expect = 1.560e-89
Identity = 147/268 (54.85%), Postives = 176/268 (65.67%), Query Frame = 1
Query:   85 PVDVGADVMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLGDKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGYG 888
            PV++     Q AAG  H C +   G V+CWG G+ G+LGYGNT+DIGD+E PS+VG VDVGG V Q+  G  HTCALL  G VRCWG G  G+LGY N   IG     +P+  GDV+VGGTV  IA G  HTCALL  G +RCWG  + G LGYGNT +IGD E P+S G V +GG    L  G    CALL    +RCWG G+YG LGYGNT  IGDNE P+S G VN+G    T I+ G  HTCAL++ G V+CWG+G  G+LGYG
Sbjct:  486 PVNILGSTKQIAAGAYHTCALFWNGKVRCWGRGAEGQLGYGNTNDIGDNESPSSVGYVDVGGTVTQIVAGNVHTCALLDTGKVRCWGYGASGQLGYGNANAIGDNE--MPSSAGDVNVGGTVTQIAAGYNHTCALLDTGKIRCWGDASSGQLGYGNTTTIGDNESPSSVGYVNVGGTATHLAAGYNHTCALLDTGKIRCWGAGSYGQLGYGNTATIGDNELPSSVGYVNIGGTA-TQITGGQFHTCALLDTGKVRCWGNGIAGQLGYG 750          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: UPI001F07029A (hypothetical protein n=1 Tax=Nocardioides sp. TF02-7 TaxID=2917724 RepID=UPI001F07029A)

HSP 1 Score: 281 bits (718), Expect = 1.110e-87
Identity = 139/257 (54.09%), Postives = 174/257 (67.70%), Query Frame = 1
Query:  118 AAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLGDKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGYG 888
            AAG +H CVV   G+V+CWG G+SG+LGYGNT D GD+E+P+  G VD+GG+ + V  G  HTCALL  G VRCWG G  G+LGY +   +G      P   G+V +GG  V++A GA HTCA+LT G VRCWG G  G LGY  TD IGD E P S G+V +GG   A+  G   +CALL+   VRCWGRG  G LGY   +++GD+E+PASAGDV +G K   AIS GA+HTCA++ GG V+CWG G +G LGYG
Sbjct:   46 AAGDRHTCVVTAAGAVRCWGDGASGRLGYGNTIDRGDNEHPALAGDVDLGGKALAVTAGSEHTCALLTAGRVRCWGEGSSGQLGYGSVTDVGDNE--APVSVGNVPLGGKAVAVAAGAAHTCAVLTTGKVRCWGEGDHGRLGYAATDDIGDDETPGSVGNVPLGGKATAVTAGAEHSCALLTTGKVRCWGRGFAGRLGYAAEDDLGDDESPASAGDVVVGGKV-VAISAGARHTCAVLAGGRVRCWGQGLHGRLGYG 299          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A0A0C2A2F2_9DELT (Molybdopterin oxidoreductase, iron-sulfur binding subunit n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2A2F2_9DELT)

HSP 1 Score: 277 bits (709), Expect = 1.230e-85
Identity = 141/263 (53.61%), Postives = 173/263 (65.78%), Query Frame = 1
Query:  106 VMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLGDKKPTAISVGA--QHTCALMEGGDVKCWGSGFYGELGYG 888
            V+Q + G  H C ++  G+V+CWG G+ G+LGYGNTD IGD+E+P + G V+VGG VVQ+  G  HTCALL  G+VRCWG G  GRLGY N   IG      PA  GDV++G  VV +  G   TCALL  G VRCWG G+FG LGYGNT++IGD E P  AGDV IGG  V +  GD   CALL    + CWG G  G LGY ++ N+GDNE PA  G++ LG    TA+ VG    HTCAL++ GDVKCWG+ + G LGYG
Sbjct:  219 VLQVSHGFSHACALLDTGAVRCWGWGAHGRLGYGNTDTIGDNEHPFSAGDVNVGGAVVQISAGAHHTCALLDTGAVRCWGGGTNGRLGYGNQLDIGDDE--EPAEVGDVNLGAPVVELDAGGGSTCALLEGGAVRCWGAGSFGKLGYGNTNNIGDNEDPVFAGDVNIGGVAVHVSVGDSHVCALLDTGGITCWGNGLVGRLGYSSSGNVGDNEAPADWGEIQLGG---TAVGVGTGLDHTCALLDTGDVKCWGAAWGGALGYG 476          
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Match: A0A0C1ZHF8_9DELT (Microbial collagenase, secreted n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C1ZHF8_9DELT)

HSP 1 Score: 277 bits (709), Expect = 5.830e-85
Identity = 140/296 (47.30%), Postives = 181/296 (61.15%), Query Frame = 1
Query:    1 CFGDGAHGALGQNTTDDIGASNIPSDFPPVDVGADVMQTAAGMQHVCVVIRGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRFHTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTVVSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDVEIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENPASAGDVNLGDKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGYG 888
            C+G    G LG      IG + +P+   PV VGA  +   AG  H C ++  G ++CWG G+SG LGYGNT +IGDDE P++ G VD+ G V  V     HTCAL+  G+VRCWG+G  G+LG  NT  IG     +P+  G V++GGT V IA GA HTCALL  G V CWG  + G LGY NT  +GD E P S G V++G     +  G    C +    +VRCWG G +G LGYG+T  IGD+E P+S GDV+LG    TA+++G  HTCAL++ G V+CWG    G+LGYG
Sbjct:  311 CWGANNFGQLGLPGAGTIGDNELPNTVAPVVVGAPAVAVTAGFLHTCAILDTGKLRCWGIGASGALGYGNTQNIGDDEDPASAGDVDIPGSVTAVVAATEHTCALIEGGAVRCWGSGTVGKLGLGNTTFIGDNE--LPSAVGPVNLGGTAVQIAAGAVHTCALLDTGEVLCWGQNSNGQLGYANTAHVGDNELPVSVGPVDVGAVATFVATGWQHTCVITDTQAVRCWGNGGFGRLGYGDTNTIGDDEPPSSVGDVDLGGGLVTALALGDTHTCALLDDGAVRCWGRSDGGQLGYG 604          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83380.19473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Q5XGV2_9DELT6.790e-9652.88Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A0C1ZJ98_9DELT2.120e-9353.56Molybdopterin oxidoreductase, iron-sulfur binding ... [more]
A0A7X7JKE0_9DELT5.290e-9355.08Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A6FXK1_9DELT9.840e-9250.00Regulator of chromosome condensation, RCC1 n=1 Tax... [more]
A0A850GDE8_9DELT4.950e-9151.53Uncharacterized protein n=1 Tax=Pseudenhygromyxa s... [more]
A0A7W1K6U9_9ACTN1.480e-9050.68Chromosome condensation regulator (Fragment) n=1 T... [more]
A0A3M1IFY5_9BACT1.560e-8954.85Uncharacterized protein n=1 Tax=Candidatus Hydroge... [more]
UPI001F07029A1.110e-8754.09hypothetical protein n=1 Tax=Nocardioides sp. TF02... [more]
A0A0C2A2F2_9DELT1.230e-8553.61Molybdopterin oxidoreductase, iron-sulfur binding ... [more]
A0A0C1ZHF8_9DELT5.830e-8547.30Microbial collagenase, secreted n=1 Tax=Enhygromyx... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83380contigM-pyrifera_M_contig83380:6..893 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score308.9
Seed ortholog evalue2.5e-81
Seed eggNOG ortholog391625.PPSIR1_21769
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Alpha-tubulin suppressor and related RCC1 domain-containing
EggNOG OGs1R504@1224,2WU6Z@28221,2YUNM@29,42YUY@68525,COG5184@1,COG5184@2
COG Functional cat.DZ
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
Exons1
Model size888
Cds size888
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.7979395-CDS-M-pyrifera_M_contig83380:5..8931622816740.7979395-CDS-M-pyrifera_M_contig83380:5..893Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83380 6..893 -
1692278150.508554-CDS-M-pyrifera_M_contig83380:5..8931692278150.508554-CDS-M-pyrifera_M_contig83380:5..893Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83380 6..893 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83380.19473.1prot_M-pyrifera_M_contig83380.19473.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83380 6..893 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83380.19473.1

>prot_M-pyrifera_M_contig83380.19473.1 ID=prot_M-pyrifera_M_contig83380.19473.1|Name=mRNA_M-pyrifera_M_contig83380.19473.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=296bp
CFGDGAHGALGQNTTDDIGASNIPSDFPPVDVGADVMQTAAGMQHVCVVI
RGGSVKCWGSGSSGKLGYGNTDDIGDDEYPSAVGSVDVGGEVVQVGTGRF
HTCALLREGSVRCWGNGGGGRLGYANTGQIGSFPFTVPALFGDVDVGGTV
VSIALGAYHTCALLTMGNVRCWGPGTFGVLGYGNTDSIGDTEHPASAGDV
EIGGFVVALGGGDWFNCALLSNASVRCWGRGTYGVLGYGNTENIGDNENP
ASAGDVNLGDKKPTAISVGAQHTCALMEGGDVKCWGSGFYGELGYG
back to top

mRNA from alignment at M-pyrifera_M_contig83380:6..893-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83380.19473.1 ID=mRNA_M-pyrifera_M_contig83380.19473.1|Name=mRNA_M-pyrifera_M_contig83380.19473.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig83380:6..893- (Macrocystis pyrifera P11B4 male)
TGCTTTGGCGATGGTGCGCATGGCGCGCTCGGCCAAAACACCACCGATGA CATTGGCGCATCAAACATCCCATCTGATTTCCCGCCCGTTGACGTTGGAG CCGACGTGATGCAGACTGCAGCAGGAATGCAGCATGTTTGTGTAGTGATC CGCGGCGGGTCTGTGAAATGCTGGGGAAGTGGTTCGTCTGGAAAGTTGGG ATATGGTAATACAGATGATATTGGTGACGATGAGTATCCAAGCGCAGTAG GGAGTGTGGACGTTGGTGGGGAAGTCGTGCAAGTAGGAACTGGTAGGTTT CACACCTGTGCCTTGTTGCGCGAAGGAAGTGTTCGGTGTTGGGGAAATGG TGGAGGGGGGAGGTTGGGGTATGCGAACACTGGCCAAATTGGATCCTTCC CCTTCACAGTCCCTGCTCTCTTCGGGGATGTTGATGTTGGTGGTACGGTT GTTTCTATAGCGCTAGGGGCATATCATACCTGTGCATTGCTCACAATGGG AAACGTTCGCTGTTGGGGGCCAGGGACGTTTGGTGTCCTTGGATATGGGA ACACAGATTCCATTGGTGATACCGAGCATCCAGCAAGTGCTGGGGATGTG GAGATTGGCGGCTTTGTGGTCGCGTTGGGTGGTGGTGATTGGTTCAATTG TGCCCTCTTGTCCAATGCATCAGTGCGTTGTTGGGGAAGAGGCACTTACG GCGTCCTTGGATATGGGAACACGGAAAATATCGGGGACAATGAGAATCCA GCAAGTGCTGGAGACGTGAATTTGGGGGACAAGAAGCCAACAGCAATATC TGTTGGTGCTCAACACACTTGTGCATTGATGGAAGGTGGGGATGTGAAAT GTTGGGGAAGTGGCTTCTATGGTGAGCTGGGATATGGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig83380:6..893-

>mRNA_M-pyrifera_M_contig83380.19473.1 ID=mRNA_M-pyrifera_M_contig83380.19473.1|Name=mRNA_M-pyrifera_M_contig83380.19473.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1776bp|location=Sequence derived from alignment at M-pyrifera_M_contig83380:6..893- (Macrocystis pyrifera P11B4 male)
TGCTTTGGCGATGGTGCGCATGGCGCGCTCGGCCAAAACACCACCGATGA
CATTGGCGCATCAAACATCCCATCTGATTTCCCGCCCGTTGACGTTGGAG
CCGACGTGATGCAGACTGCAGCAGGAATGCAGCATGTTTGTGTAGTGATC
CGCGGCGGGTCTGTGAAATGCTGGGGAAGTGGTTCGTCTGGAAAGTTGGG
ATATGGTAATACAGATGATATTGGTGACGATGAGTATCCAAGCGCAGTAG
GGAGTGTGGACGTTGGTGGGGAAGTCGTGCAAGTAGGAACTGGTAGGTTT
CACACCTGTGCCTTGTTGCGCGAAGGAAGTGTTCGGTGTTGGGGAAATGG
TGGAGGGGGGAGGTTGGGGTATGCGAACACTGGCCAAATTGGATCCTTCC
CCTTCACAGTCCCTGCTCTCTTCGGGGATGTTGATGTTGGTGGTACGGTT
GTTTCTATAGCGCTAGGGGCATATCATACCTGTGCATTGCTCACAATGGG
AAACGTTCGCTGTTGGGGGCCAGGGACGTTTGGTGTCCTTGGATATGGGA
ACACAGATTCCATTGGTGATACCGAGCATCCAGCAAGTGCTGGGGATGTG
GAGATTGGCGGCTTTGTGGTCGCGTTGGGTGGTGGTGATTGGTTCAATTG
TGCCCTCTTGTCCAATGCATCAGTGCGTTGTTGGGGAAGAGGCACTTACG
GCGTCCTTGGATATGGGAACACGGAAAATATCGGGGACAATGAGAATCCA
GCAAGTGCTGGAGACGTGAATTTGGGGGACAAGAAGCCAACAGCAATATC
TGTTGGTGCTCAACACACTTGTGCATTGATGGAAGGTGGGGATGTGAAAT
GTTGGGGAAGTGGCTTCTATGGTGAGCTGGGATATGGATGCTTTGGCGAT
GGTGCGCATGGCGCGCTCGGCCAAAACACCACCGATGACATTGGCGCATC
AAACATCCCATCTGATTTCCCGCCCGTTGACGTTGGAGCCGACGTGATGC
AGACTGCAGCAGGAATGCAGCATGTTTGTGTAGTGATCCGCGGCGGGTCT
GTGAAATGCTGGGGAAGTGGTTCGTCTGGAAAGTTGGGATATGGTAATAC
AGATGATATTGGTGACGATGAGTATCCAAGCGCAGTAGGGAGTGTGGACG
TTGGTGGGGAAGTCGTGCAAGTAGGAACTGGTAGGTTTCACACCTGTGCC
TTGTTGCGCGAAGGAAGTGTTCGGTGTTGGGGAAATGGTGGAGGGGGGAG
GTTGGGGTATGCGAACACTGGCCAAATTGGATCCTTCCCCTTCACAGTCC
CTGCTCTCTTCGGGGATGTTGATGTTGGTGGTACGGTTGTTTCTATAGCG
CTAGGGGCATATCATACCTGTGCATTGCTCACAATGGGAAACGTTCGCTG
TTGGGGGCCAGGGACGTTTGGTGTCCTTGGATATGGGAACACAGATTCCA
TTGGTGATACCGAGCATCCAGCAAGTGCTGGGGATGTGGAGATTGGCGGC
TTTGTGGTCGCGTTGGGTGGTGGTGATTGGTTCAATTGTGCCCTCTTGTC
CAATGCATCAGTGCGTTGTTGGGGAAGAGGCACTTACGGCGTCCTTGGAT
ATGGGAACACGGAAAATATCGGGGACAATGAGAATCCAGCAAGTGCTGGA
GACGTGAATTTGGGGGACAAGAAGCCAACAGCAATATCTGTTGGTGCTCA
ACACACTTGTGCATTGATGGAAGGTGGGGATGTGAAATGTTGGGGAAGTG
GCTTCTATGGTGAGCTGGGATATGGA
back to top