mRNA_M-pyrifera_M_contig8337.19470.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: D8LDL9_ECTSI (Hect E3 ubiquitin ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL9_ECTSI) HSP 1 Score: 219 bits (557), Expect = 1.160e-61 Identity = 177/415 (42.65%), Postives = 218/415 (52.53%), Query Frame = 1 Query: 1 LGEYGRLGHGNGHSLSRPALVESLVNERITQIAAGAAHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRVYIPDYVGPRDASGAADMLRNTHSSRGADDSTADATGCVQME-RVTCATATSNKTVLGTSRGRVLNSICVSLPTIS--TVGFVELGRLSEGLRCWRVETALSLCRPSLTVFVVDSDGHAHMFEEGEG-NLRTSFVSAQADEDCNTAPLRSPASLIKCCSVFVSPSEYSRGEQVSFVPDGLR----GWGPAASVVVV-VSDDGSLMTATTDGSGVHELRRRRSDGVVCAAVGVNQS--QPYGLLMVDDGASLLTWGSAITGQLGHGHPXXXXXXTVVTSAFVLGSTLSKRTGTRSSNVRVSVADDGRNITPSLGRGGXXXXXXXXXXXXXXXXALVDAAADERD 1212 LG+YGRLGHGN SLSRP L++SL ERITQ+AAGAAHSVAV+W GKAFTWGWG+ G LG G ++D PTRV IP D SG S+ G D A G V +E VTCATA + TVLGT G VL S +S T + F E GRL +GLRCWRV+ + V +D G + E G L + S + PL A C SV +SPS+ RG+ ++ G GWG +V VS DG L+ + + + + RS GVV A+ + S +GL + D G S+LTWG TG LGHG P VT+A VLGS S G RS++V VSV D + +G G XXXXX ALVDAAAD RD Sbjct: 193 LGDYGRLGHGNEASLSRPTLIDSLAGERITQVAAGAAHSVAVSWSGKAFTWGWGYQGVLGRGGDDDVLKPTRVAIP----LMDVSGG--------SNGGGD---ARGGGVVAVEGHVTCATAGRSCTVLGTRHGVVLFSGLMSTMTSNHFCAVFSEFGRLGDGLRCWRVQCECLPATGTTLVMAIDPAGQVYDVEPRNGVALGGNNSSRYGNPSKQRVPLS--ADYAPCSSVILSPSDNERGQ--CWLETGGEVEESGWGMDVCFGMVGVSRDGRLLFDSDE----DDAGKDRSVGVVHASARIGNSCEVSHGLRLEDGGTSVLTWGDGRTGHLGHGTPAFEPKPKGVTTAVVLGSAAS---GVRSASVNVSVDDSLGGSSREVG-GMHSSXXXXXEAGFRGVLALVDAAADRRD 580
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: A0A6H5L840_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L840_9PHAE) HSP 1 Score: 196 bits (498), Expect = 3.350e-53 Identity = 168/419 (40.10%), Postives = 217/419 (51.79%), Query Frame = 1 Query: 1 LGEYGRLGHGNGHSLSRPALVESLVNERITQIAAGAAHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRVYIPDYVGPRDASGAADMLRNTHSSRGADDSTADATGCVQME-RVTCATATSNKTVLGTSRGRVLNSICVSLPTIST--VGFVELGRLSEGLRCWRVETALSLCRPSLTVFVVDSDGHAHMFEEGEG-NLRTSFVSAQADEDCNTAPLRSPASLIKCCSVFVSPSEYSRGEQVSFVPDGLR----GWGPAASVVVV-VSDDGSLMTATTDGSGVHELRRRRSDGVVCAA--VGVNQSQPYGLLMVDDGASLLTWGSAITGQLGHGHPXXXXXXTVVTSAFVLGSTLSKRTGTRSSNVRVSVADDGRNITPSLGRGGXXXXXXXXXXXXXXXXALVDAAADERDAREE 1224 LG+YGRLGHG+ SLSRP L+ESL ERITQ+AAG AHSVAV+W GKA+TWGWG++G LG G++ D PTRV IP ++ S G D A G +E VTCATA + TVLGT G VL S ++ T + F E GRL +GLRCWRV+ + V +D G + + G L + S + PL A+ C SV +SP + RG+ ++ G GWG S +V VS DG L+ + + + + RS GVV A+ +G + +GL M D G +LTWG G+ GH VVT+A VLGS S G RS++V VSV D S XXXXXXX ALVDAAAD+RDA ++ Sbjct: 193 LGDYGRLGHGSEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAYTWGWGYLGILGRGSDADVLKPTRVAIP-------------LINAVGGSDGGD---ARGGGVAAVEGHVTCATAGRSCTVLGTRHGAVLFSGFITTMTSNRFCAVFSEFGRLGDGLRCWRVQCECLPVTDTTVVTAIDPAGQVYEVQPRNGVALGGNSSSRYGNPSEQRVPLS--ANYAPCSSVILSPFDDERGQ--CWLETGGEVEEPGWGMNLSFGMVGVSRDGRLLFDSDE----DDAGKERSAGVVHASARIGGSCEVSHGLRMEDGGTCVLTWGD---GRTGH----------VVTTAVVLGSAAS---GVRSASVNVSVDDSFGGS--SXXXXXXXXXXXXGGPRFRGVLALVDAAADKRDAADD 569
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: A0A444SBB4_ARMVU (Ultraviolet-B receptor UVR8 n=2 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444SBB4_ARMVU) HSP 1 Score: 78.6 bits (192), Expect = 8.100e-12 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 10 YGRLGHGNGHSLSRPALVESLVNERITQIAAGAAHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRV 219 YG++G G RP L+ S +N ++ +A G HS+AVT EGK +TWGWG G LGHGN EDC P V Sbjct: 998 YGQVGTGGTGRYPRPTLISSFINVKVIHVACGQYHSLAVTKEGKLYTWGWGVHGQLGHGNVEDCLKPMLV 1067
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: UPI00193E9CD8 (uncharacterized protein LOC111057898 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193E9CD8) HSP 1 Score: 77.4 bits (189), Expect = 1.950e-11 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 7 EYGRLGHGNGHSLSRPALVESLVNERITQIAAGAAHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRV 219 +YG+LG G S+P LVE+L N R+ + G HS+A+T +GK +TWGWG G LGHG+ EDC PT V Sbjct: 928 KYGQLGVGKVMQSSQPRLVETLANRRVVTVECGQYHSMALTDDGKLYTWGWGVHGQLGHGSVEDCHYPTLV 998
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: UPI00083C5375 (E3 ubiquitin-protein ligase HERC2 n=1 Tax=Eufriesea mexicana TaxID=516756 RepID=UPI00083C5375) HSP 1 Score: 75.9 bits (185), Expect = 6.660e-11 Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 1 LGEYGRLGHGNGHSLSRPALVESLVNERITQIAAGA--AHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRV 219 LGEYGRLGHGN S S+P LV+SLV +R+ Q+A G+ A ++A+T +G ++WG G G LG G + C+ P V Sbjct: 3427 LGEYGRLGHGNTASQSKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLV 3501
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: A0A310SBC7_9HYME (HECT-type E3 ubiquitin transferase n=1 Tax=Eufriesea mexicana TaxID=516756 RepID=A0A310SBC7_9HYME) HSP 1 Score: 75.9 bits (185), Expect = 6.670e-11 Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 1 LGEYGRLGHGNGHSLSRPALVESLVNERITQIAAGA--AHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRV 219 LGEYGRLGHGN S S+P LV+SLV +R+ Q+A G+ A ++A+T +G ++WG G G LG G + C+ P V Sbjct: 2859 LGEYGRLGHGNTASQSKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLV 2933
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: A0A8K0KKI9_LADFU (Uncharacterized protein (Fragment) n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KKI9_LADFU) HSP 1 Score: 73.2 bits (178), Expect = 1.160e-10 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 7 EYGRLGHGNGHSLSR-PALVESLVNERITQIAAGAAHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRV 219 ++G++G G S P LVESL E I +I+AG HS+A+T +G+ +TWGWG G LGHG+ EDC PT V Sbjct: 188 QFGQIGVGMSSGQSPYPTLVESLCEEHIVEISAGQYHSMALTEDGRVYTWGWGVYGQLGHGDVEDCVVPTVV 259
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: A9TH59_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TH59_PHYPA) HSP 1 Score: 73.2 bits (178), Expect = 1.510e-10 Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 4 GEYGRLGHGNGHSLSRPALVESLVNERITQIAAGAAHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRVY 222 G+YG+LGHG+ ++ P V++LV+ + QIA G H++A+T +G+ F+WG G G GHG +ED P +V+ Sbjct: 220 GKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH 292
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: R1D8A8_EMIHU (Uncharacterized protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D8A8_EMIHU) HSP 1 Score: 68.2 bits (165), Expect = 1.740e-10 Identity = 29/68 (42.65%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 16 RLGHGNGHSLSRPALVESLVNERITQIAAGAAHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRV 219 RLGHG+ P VE+L +R+ ++AGA HS+A+T +G ++WGWG G LGHG+E++ + P ++ Sbjct: 39 RLGHGDEQRQLLPKKVEALTGQRVVAVSAGAYHSLAITADGAVWSWGWGASGRLGHGDEQNQWQPKKL 106
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Match: UPI001ED8BB4D (uncharacterized protein LOC124155755 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8BB4D) HSP 1 Score: 74.3 bits (181), Expect = 1.900e-10 Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 7 EYGRLGHG-NGHSLSRPALVESLVNERITQIAAGAAHSVAVTWEGKAFTWGWGFMGTLGHGNEEDCFDPTRV 219 ++G++G G + P LVESL E++ Q++AG HS+A+T +G+ +TWGWG G LGHGN EDC PT V Sbjct: 1025 QFGQIGIGMSSGQAPYPRLVESLCREQVVQVSAGQYHSMALTDDGRVYTWGWGVYGQLGHGNVEDCTVPTLV 1096 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8337.19470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8337.19470.1 >prot_M-pyrifera_M_contig8337.19470.1 ID=prot_M-pyrifera_M_contig8337.19470.1|Name=mRNA_M-pyrifera_M_contig8337.19470.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=413bp LGEYGRLGHGNGHSLSRPALVESLVNERITQIAAGAAHSVAVTWEGKAFTback to top mRNA from alignment at M-pyrifera_M_contig8337:9902..11518- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8337.19470.1 ID=mRNA_M-pyrifera_M_contig8337.19470.1|Name=mRNA_M-pyrifera_M_contig8337.19470.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1617bp|location=Sequence derived from alignment at M-pyrifera_M_contig8337:9902..11518- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8337:9902..11518- >mRNA_M-pyrifera_M_contig8337.19470.1 ID=mRNA_M-pyrifera_M_contig8337.19470.1|Name=mRNA_M-pyrifera_M_contig8337.19470.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2478bp|location=Sequence derived from alignment at M-pyrifera_M_contig8337:9902..11518- (Macrocystis pyrifera P11B4 male)back to top |