mRNA_M-pyrifera_M_contig83360.19468.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83360.19468.1
Unique NamemRNA_M-pyrifera_M_contig83360.19468.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: A0A3C1KL19_9GAMM (Long-chain fatty acid--CoA ligase n=8 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KL19_9GAMM)

HSP 1 Score: 563 bits (1450), Expect = 9.030e-199
Identity = 289/298 (96.98%), Postives = 294/298 (98.66%), Query Frame = 1
Query:    1 AGRHEALFTGLTMAPLATSAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR 894
            AGRHEALFTGLTMAPLATSAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGS+ILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELL+RVREGGLPVYEGYGLSECASVVSLNTP AD AGSSGRVLPHVKVSVRDGE+MVDGNRFLGYLGDPASW SGPVATGDLGQLDA+GFLTVSGRRK+LLISSYGRNISPEWVESELLADGCLL AVVLGDAR
Sbjct:  132 AGRHEALFTGLTMAPLATSAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSVILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLHRVREGGLPVYEGYGLSECASVVSLNTPAADHAGSSGRVLPHVKVSVRDGEIMVDGNRFLGYLGDPASWESGPVATGDLGQLDARGFLTVSGRRKHLLISSYGRNISPEWVESELLADGCLLQAVVLGDAR 429          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: A0A3C1NXF7_9GAMM (Long-chain fatty acid--CoA ligase (Fragment) n=2 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C1NXF7_9GAMM)

HSP 1 Score: 543 bits (1400), Expect = 7.690e-193
Identity = 278/286 (97.20%), Postives = 283/286 (98.95%), Query Frame = 1
Query:    1 AGRHEALFTGLTMAPLATSAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADG 858
            AGRHEALFTGLTMAPLAT+AGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGS+ILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELL+RVREGGLPVYEGYGLSECASVVSLNTP AD AGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLD +GFLTVSGRRK+LLISSYGRNISPEWVESELLADG
Sbjct:  120 AGRHEALFTGLTMAPLATNAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSVILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLHRVREGGLPVYEGYGLSECASVVSLNTPAADHAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDTRGFLTVSGRRKHLLISSYGRNISPEWVESELLADG 405          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: A0A2E7C5J9_9GAMM (AMP-binding domain-containing protein n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C5J9_9GAMM)

HSP 1 Score: 464 bits (1195), Expect = 2.830e-160
Identity = 242/298 (81.21%), Postives = 261/298 (87.58%), Query Frame = 1
Query:    1 AGRHEALFTGLTMAPLATSAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR 894
            AG  E L  GL++  L   AGGAIPPGTAKITFTSGSTG+PKGVCLSTQQCLRVAQSL A VGL+APRHLS+LPLSTLLENIAGVYMPLLAGGSI+LP P ELGLAGSSGVDA+RLL  ++R NP TLIVIPQLLTLFD+AL  GWQ PPALAFVAVGGARVAP+LL RVR+ GLPVYEGYGLSECASVVSLNTP AD+ G+SGRVLPHV+VSV  GEL+VDGNRFLGYL DP SW SGPVATGDLG +DA GFL VSGRRK+LLISS+GRNISPEWVESELLADGCL   VVLGD R
Sbjct:  116 AGEWEDLPFGLSVLRLDVGAGGAIPPGTAKITFTSGSTGNPKGVCLSTQQCLRVAQSLAAGVGLTAPRHLSLLPLSTLLENIAGVYMPLLAGGSIVLPPPAELGLAGSSGVDAKRLLGGLARINPQTLIVIPQLLTLFDQALGGGWQAPPALAFVAVGGARVAPDLLRRVRQAGLPVYEGYGLSECASVVSLNTPDADRPGTSGRVLPHVRVSVSAGELVVDGNRFLGYLDDPRSWQSGPVATGDLGHIDADGFLAVSGRRKHLLISSFGRNISPEWVESELLADGCLRQVVVLGDDR 413          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: UPI0019D39AE1 (AMP-binding protein n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D39AE1)

HSP 1 Score: 361 bits (927), Expect = 1.090e-119
Identity = 178/275 (64.73%), Postives = 215/275 (78.18%), Query Frame = 1
Query:   70 IPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR 894
            +P GT+KITFTSGSTG PKGVCLST QC+ VA+SL A  GL   RHL+ILPL+TLLENIAG+YMP+LAGG++ILP   E+GLAGS G+D  R+LSAI  W P++ I++P++L +   A  AGW PP +L F+AVGGARV+PE++ R RE GLPVYEGYGLSECASVVSLN P  D+ G+SGR+LPHV V   DGEL + GN FLGYLGD A W    +A+GDLG++   GFL + GRRKNLLI+S+GRN+SPEWVESELLA G L  AVV GD R
Sbjct:  140 LPRGTSKITFTSGSTGQPKGVCLSTSQCMAVAESLLARSGLRGARHLAILPLATLLENIAGLYMPILAGGTVILPGAREVGLAGSGGLDVPRMLSAIDHWQPNSAILVPEILRVLVAATGAGWTPPGSLRFLAVGGARVSPEIVLRARELGLPVYEGYGLSECASVVSLNAPGVDRPGTSGRILPHVSVREVDGELRISGNAFLGYLGDRAGWSPAEIASGDLGRVTEDGFLVIEGRRKNLLITSFGRNVSPEWVESELLAGGVLRQAVVFGDGR 414          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: A0A2D8IV12_9GAMM (AMP-binding domain-containing protein n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D8IV12_9GAMM)

HSP 1 Score: 358 bits (919), Expect = 1.940e-118
Identity = 187/275 (68.00%), Postives = 214/275 (77.82%), Query Frame = 1
Query:   70 IPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR 894
            +P  T KITFTSGSTG PKGVCLS  QCL VA SL  AV     RHLS+LPL+ LLENIAG+Y  LLAGG +ILP P +LGL+GSSGV     L A+ RW P TLI++P+ L   DRAL AGW+PP +L FVAVGGARVAP LL R+R+ GLPVYEGYGLSECASVVSLNTP AD+ GSSGR LPHV VSV DGEL+V GN FL YLG+       PV TGD+ +LDA+GF+ ++GRRK+LLISS+GRNISPEWVESELLA G L+ AVVLGDAR
Sbjct:  143 LPSATGKITFTSGSTGQPKGVCLSNAQCLAVAASLVDAVDCPGARHLSLLPLAVLLENIAGLYRTLLAGGVVILPDPADLGLSGSSGVHLPGFLWALERWQPETLILVPEWLQGLDRALAAGWRPPLSLRFVAVGGARVAPALLQRIRDRGLPVYEGYGLSECASVVSLNTPAADRPGSSGRPLPHVHVSVEDGELVVAGNTFLAYLGESPHPPHCPVRTGDIAELDAEGFVRIAGRRKHLLISSFGRNISPEWVESELLAGGGLMQAVVLGDAR 417          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: A0A3L7E2M7_9GAMM (AMP-binding domain-containing protein n=2 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7E2M7_9GAMM)

HSP 1 Score: 357 bits (916), Expect = 5.170e-118
Identity = 182/287 (63.41%), Postives = 217/287 (75.61%), Query Frame = 1
Query:   28 GLTMAPLATSAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGD 888
            GL + PL  +   A+PP TAK+TFTSGSTG PKGVCL+T QCLRVA+SL   + + +PRHL  LPLSTLLENIAG+Y+PLL GG  ++ +   +G+AGSSGV     L AI +  P T+I++PQLL+L D A+  GWQ P +L FVAVGG RVAP ++ R R  G PVYEGYGLSECASVVSLNTP A+QA +SGRVLPHV+V V  GEL+V GN FLGYL  P SWG+  V TGDLG+LD QG+L V GR KN+L+SSYGRNISPEWVESEL A G +  AVVLGD
Sbjct:  127 GLELRPLTVAGEAAMPPATAKLTFTSGSTGQPKGVCLATAQCLRVARSLGQVIDIRSPRHLCALPLSTLLENIAGIYLPLLMGGCSLVYSAASMGMAGSSGVQPAEFLRAIEQRQPETMILVPQLLSLIDSAISGGWQAPQSLRFVAVGGGRVAPAVVERCRAAGFPVYEGYGLSECASVVSLNTPRAEQAATSGRVLPHVQVEVDRGELLVSGNTFLGYLNQPESWGASQVRTGDLGRLDDQGYLRVEGRCKNVLVSSYGRNISPEWVESELQASGPIQQAVVLGD 413          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: UPI0019F17210 (AMP-binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F17210)

HSP 1 Score: 354 bits (909), Expect = 5.890e-117
Identity = 177/271 (65.31%), Postives = 214/271 (78.97%), Query Frame = 1
Query:   82 TAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR 894
            T KITFTSGSTG PKGVCLS +QCL VAQSL  A  L  PRHL +LPLSTLLENI G+YMPLL+GG  +L  P ELG+ GSS +D QRLL+AI R+ P+T+I++PQLL++ D A+++GW+PP +LAFVAVGGARVA E++ RVR  GLPVYEGYGLSE ASVVSLNT   ++ G+SG+VLPHV+V  + GEL V GN FLGY+G P SWG   + TGD+G LD+ G++TV GR KN+LISSYGRNISPEWVESEL+A G     +VLGD R
Sbjct:  144 TTKITFTSGSTGKPKGVCLSFEQCLTVAQSLAQATALRKPRHLCLLPLSTLLENIGGIYMPLLSGGCSVLVDPDELGMLGSSQLDPQRLLAAIDRYQPNTMILVPQLLSVLDSAMQSGWRPPQSLAFVAVGGARVAAEMVERVRANGLPVYEGYGLSESASVVSLNTATHNRPGTSGKVLPHVRVVSQQGELEVSGNTFLGYMGQPDSWGVQTIRTGDVGSLDSDGYVTVKGRSKNILISSYGRNISPEWVESELMASGVFHQVLVLGDGR 414          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: A0A5C9A4H2_9GAMM (Long-chain fatty acid--CoA ligase n=2 Tax=Parahaliea aestuarii TaxID=1852021 RepID=A0A5C9A4H2_9GAMM)

HSP 1 Score: 353 bits (905), Expect = 9.990e-116
Identity = 186/292 (63.70%), Postives = 224/292 (76.71%), Query Frame = 1
Query:   19 LFTGLTMAPLATSAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR 894
            L  GL+MA     A   +P  TAKITFTSGSTG PKGVCLST+QCL VA+SL     L+  RHL++LPL TLLENIAGVY+PLLAGG + +P   + GLAGSSG+DAQR L+ ++R  P +LI++P+LL +   A  AGW  P +L FVAVGGARVAP L+ R R  GLPVYEGYGLSECASVV+LN P  D+ G+ G+VLPH+ V V DGEL ++GN FLGYLGDP SW    VA+GDLG+L+ +GFL V+GRRK+LLI++YGRN+SPEWVESELLA G LL AVVLGDAR
Sbjct:  173 LLDGLSMAFRPAVAATPLPERTAKITFTSGSTGQPKGVCLSTEQCLVVARSLLQRTALTKVRHLALLPLPTLLENIAGVYLPLLAGGQVCVPGSADTGLAGSSGLDAQRFLALLARERPESLILVPELLRVLVGATAAGWVAPDSLRFVAVGGARVAPALVSRARAAGLPVYEGYGLSECASVVALNGPGNDRPGTCGQVLPHLVVHVNDGELQIEGNAFLGYLGDPESWYPERVASGDLGRLE-EGFLVVAGRRKHLLITAYGRNVSPEWVESELLASGALLQAVVLGDAR 463          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: A0A5C9A7G4_9GAMM (Long-chain fatty acid--CoA ligase n=2 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A7G4_9GAMM)

HSP 1 Score: 349 bits (895), Expect = 4.550e-114
Identity = 177/275 (64.36%), Postives = 214/275 (77.82%), Query Frame = 1
Query:   70 IPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR 894
            +P GT KITFTSGSTG P+GVCLST+QCL VA SL +  GL+  RHL++LPL+TLLENIAGVY+PLL+GG +I+P   + GL GSSG+DA R L+A+    P +LI++P+LL     A  +GWQ P +L FVAVGGARVAP L+ R R  GLPVYEGYGLSECASVV+LN P  D+ G+SG+VLPH+ V   DGEL+V+GN FLGYLG+P+SW    VATGDLG+LD +G+L V GRRKNLLI++YGRNISPEWVESELL    L  AVVLGD R
Sbjct:  197 LPAGTTKITFTSGSTGQPRGVCLSTEQCLAVAASLLSRTGLNRVRHLALLPLATLLENIAGVYLPLLSGGQVIVPGCAQTGLIGSSGLDAHRFLTALEVAQPQSLILVPELLRGLVEAAESGWQAPSSLRFVAVGGARVAPGLVERARRQGLPVYEGYGLSECASVVALNAPGRDRPGTSGQVLPHLAVQEEDGELVVEGNAFLGYLGEPSSWYPQRVATGDLGRLDDEGYLVVEGRRKNLLITAYGRNISPEWVESELLGSTVLQQAVVLGDGR 471          
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Match: A0A1B1YXJ1_9GAMM (AMP-binding domain-containing protein n=2 Tax=Immundisolibacter cernigliae TaxID=1810504 RepID=A0A1B1YXJ1_9GAMM)

HSP 1 Score: 337 bits (865), Expect = 2.080e-110
Identity = 172/275 (62.55%), Postives = 208/275 (75.64%), Query Frame = 1
Query:   70 IPPGTAKITFTSGSTGSPKGVCLSTQQCLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAPTELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPPALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQAGSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLDAQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR 894
            +P GTAKITFTSGSTG+PKGVCLS +  LRVAQSL   + L   RHL +LPL+TLLEN+ GVY PLL+ GS+++P   ELGL GSSGVDA  L +AI R  PH++I++PQLL     A++ GW+ P +L FVAVGGARV   L+   R GGLPVYEGYGLSECASVVSLNTP AD+ G++GR LPH+++ VRDGEL V G+ FLGYLG P SW    V TGDLG LDA GF+ V GRR NL+++S+GRN+SPEWVE+ELLA   L  AV+ G AR
Sbjct:  134 MPSGTAKITFTSGSTGTPKGVCLSAEHPLRVAQSLAEMIALPGVRHLCLLPLATLLENVGGVYAPLLSRGSVVVPGLAELGLHGSSGVDAAALTTAIDRHRPHSMILVPQLLQALVAAMQRGWRAPASLRFVAVGGARVPVSLIVAARRGGLPVYEGYGLSECASVVSLNTPAADRPGTAGRPLPHLRLGVRDGELTVSGSSFLGYLGAPESWRPERVHTGDLGGLDADGFVQVQGRRDNLIVTSFGRNLSPEWVEAELLAGPLLGQAVLFGSAR 408          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83360.19468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1KL19_9GAMM9.030e-19996.98Long-chain fatty acid--CoA ligase n=8 Tax=Halieace... [more]
A0A3C1NXF7_9GAMM7.690e-19397.20Long-chain fatty acid--CoA ligase (Fragment) n=2 T... [more]
A0A2E7C5J9_9GAMM2.830e-16081.21AMP-binding domain-containing protein n=1 Tax=Hali... [more]
UPI0019D39AE11.090e-11964.73AMP-binding protein n=1 Tax=Parahaliea mediterrane... [more]
A0A2D8IV12_9GAMM1.940e-11868.00AMP-binding domain-containing protein n=2 Tax=Hali... [more]
A0A3L7E2M7_9GAMM5.170e-11863.41AMP-binding domain-containing protein n=2 Tax=Seon... [more]
UPI0019F172105.890e-11765.31AMP-binding protein n=1 Tax=Proteobacteria bacteri... [more]
A0A5C9A4H2_9GAMM9.990e-11663.70Long-chain fatty acid--CoA ligase n=2 Tax=Parahali... [more]
A0A5C9A7G4_9GAMM4.550e-11464.36Long-chain fatty acid--CoA ligase n=2 Tax=Parahali... [more]
A0A1B1YXJ1_9GAMM2.080e-11062.55AMP-binding domain-containing protein n=2 Tax=Immu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83360contigM-pyrifera_M_contig83360:2..895 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score561.6
Seed ortholog evalue2.2e-157
Seed eggNOG ortholog1121937.AUHJ01000001_gene532
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.COG1022 Long-chain acyl-CoA synthetases (AMP-forming)
EggNOG OGs1MU4D@1224,1RPNE@1236,465UH@72275,COG1022@1,COG1022@2
COG Functional cat.I
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size894
Cds size894
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.582616-CDS-M-pyrifera_M_contig83360:1..8951622816740.582616-CDS-M-pyrifera_M_contig83360:1..895Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83360 2..895 +
1692278150.4223237-CDS-M-pyrifera_M_contig83360:1..8951692278150.4223237-CDS-M-pyrifera_M_contig83360:1..895Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83360 2..895 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83360.19468.1prot_M-pyrifera_M_contig83360.19468.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83360 2..895 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83360.19468.1

>prot_M-pyrifera_M_contig83360.19468.1 ID=prot_M-pyrifera_M_contig83360.19468.1|Name=mRNA_M-pyrifera_M_contig83360.19468.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=298bp
AGRHEALFTGLTMAPLATSAGGAIPPGTAKITFTSGSTGSPKGVCLSTQQ
CLRVAQSLQAAVGLSAPRHLSILPLSTLLENIAGVYMPLLAGGSIILPAP
TELGLAGSSGVDAQRLLSAISRWNPHTLIVIPQLLTLFDRALRAGWQPPP
ALAFVAVGGARVAPELLYRVREGGLPVYEGYGLSECASVVSLNTPVADQA
GSSGRVLPHVKVSVRDGELMVDGNRFLGYLGDPASWGSGPVATGDLGQLD
AQGFLTVSGRRKNLLISSYGRNISPEWVESELLADGCLLLAVVLGDAR
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mRNA from alignment at M-pyrifera_M_contig83360:2..895+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83360.19468.1 ID=mRNA_M-pyrifera_M_contig83360.19468.1|Name=mRNA_M-pyrifera_M_contig83360.19468.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig83360:2..895+ (Macrocystis pyrifera P11B4 male)
GCAGGCCGTCACGAAGCCCTGTTCACCGGTTTGACTATGGCACCGCTTGC CACGAGCGCCGGTGGCGCGATTCCGCCAGGTACGGCGAAAATCACCTTCA CCTCCGGCTCCACCGGTAGCCCCAAGGGTGTTTGCCTCTCGACGCAACAG TGCTTGCGCGTGGCGCAGTCGCTGCAGGCTGCCGTCGGGCTCTCAGCTCC TCGCCACCTGTCGATCCTGCCGCTGAGCACGCTGCTGGAGAATATTGCCG GCGTTTATATGCCCCTGCTCGCGGGTGGCAGCATCATCCTGCCTGCGCCC ACGGAGTTGGGGCTGGCGGGCAGTTCGGGTGTCGATGCACAGCGACTGCT GTCAGCAATATCGCGATGGAACCCGCACACGCTCATTGTGATTCCACAAT TGCTAACGCTGTTTGACCGGGCCTTGCGGGCCGGCTGGCAGCCTCCGCCT GCACTGGCTTTTGTCGCCGTGGGCGGCGCGCGGGTGGCGCCCGAACTGCT GTATCGGGTGCGCGAGGGCGGCCTGCCGGTGTACGAGGGCTATGGATTAT CTGAATGTGCCTCAGTGGTCAGCCTCAACACACCGGTTGCGGACCAGGCG GGAAGCAGTGGTCGCGTCCTGCCGCATGTAAAGGTCAGCGTGCGGGACGG TGAACTCATGGTCGACGGTAATCGCTTTCTGGGTTATCTGGGCGACCCTG CGAGTTGGGGGTCAGGGCCGGTGGCCACGGGTGACCTCGGTCAGCTGGAT GCCCAGGGCTTCCTGACGGTATCCGGTCGGCGCAAAAACCTGCTGATCAG CAGCTATGGACGTAATATTTCCCCGGAATGGGTGGAAAGCGAGCTACTTG CCGACGGTTGTCTGTTGCTGGCCGTGGTACTCGGTGACGCTCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83360:2..895+

>mRNA_M-pyrifera_M_contig83360.19468.1 ID=mRNA_M-pyrifera_M_contig83360.19468.1|Name=mRNA_M-pyrifera_M_contig83360.19468.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1788bp|location=Sequence derived from alignment at M-pyrifera_M_contig83360:2..895+ (Macrocystis pyrifera P11B4 male)
GCAGGCCGTCACGAAGCCCTGTTCACCGGTTTGACTATGGCACCGCTTGC
CACGAGCGCCGGTGGCGCGATTCCGCCAGGTACGGCGAAAATCACCTTCA
CCTCCGGCTCCACCGGTAGCCCCAAGGGTGTTTGCCTCTCGACGCAACAG
TGCTTGCGCGTGGCGCAGTCGCTGCAGGCTGCCGTCGGGCTCTCAGCTCC
TCGCCACCTGTCGATCCTGCCGCTGAGCACGCTGCTGGAGAATATTGCCG
GCGTTTATATGCCCCTGCTCGCGGGTGGCAGCATCATCCTGCCTGCGCCC
ACGGAGTTGGGGCTGGCGGGCAGTTCGGGTGTCGATGCACAGCGACTGCT
GTCAGCAATATCGCGATGGAACCCGCACACGCTCATTGTGATTCCACAAT
TGCTAACGCTGTTTGACCGGGCCTTGCGGGCCGGCTGGCAGCCTCCGCCT
GCACTGGCTTTTGTCGCCGTGGGCGGCGCGCGGGTGGCGCCCGAACTGCT
GTATCGGGTGCGCGAGGGCGGCCTGCCGGTGTACGAGGGCTATGGATTAT
CTGAATGTGCCTCAGTGGTCAGCCTCAACACACCGGTTGCGGACCAGGCG
GGAAGCAGTGGTCGCGTCCTGCCGCATGTAAAGGTCAGCGTGCGGGACGG
TGAACTCATGGTCGACGGTAATCGCTTTCTGGGTTATCTGGGCGACCCTG
CGAGTTGGGGGTCAGGGCCGGTGGCCACGGGTGACCTCGGTCAGCTGGAT
GCCCAGGGCTTCCTGACGGTATCCGGTCGGCGCAAAAACCTGCTGATCAG
CAGCTATGGACGTAATATTTCCCCGGAATGGGTGGAAAGCGAGCTACTTG
CCGACGGTTGTCTGTTGCTGGCCGTGGTACTCGGTGACGCTCGTGCAGGC
CGTCACGAAGCCCTGTTCACCGGTTTGACTATGGCACCGCTTGCCACGAG
CGCCGGTGGCGCGATTCCGCCAGGTACGGCGAAAATCACCTTCACCTCCG
GCTCCACCGGTAGCCCCAAGGGTGTTTGCCTCTCGACGCAACAGTGCTTG
CGCGTGGCGCAGTCGCTGCAGGCTGCCGTCGGGCTCTCAGCTCCTCGCCA
CCTGTCGATCCTGCCGCTGAGCACGCTGCTGGAGAATATTGCCGGCGTTT
ATATGCCCCTGCTCGCGGGTGGCAGCATCATCCTGCCTGCGCCCACGGAG
TTGGGGCTGGCGGGCAGTTCGGGTGTCGATGCACAGCGACTGCTGTCAGC
AATATCGCGATGGAACCCGCACACGCTCATTGTGATTCCACAATTGCTAA
CGCTGTTTGACCGGGCCTTGCGGGCCGGCTGGCAGCCTCCGCCTGCACTG
GCTTTTGTCGCCGTGGGCGGCGCGCGGGTGGCGCCCGAACTGCTGTATCG
GGTGCGCGAGGGCGGCCTGCCGGTGTACGAGGGCTATGGATTATCTGAAT
GTGCCTCAGTGGTCAGCCTCAACACACCGGTTGCGGACCAGGCGGGAAGC
AGTGGTCGCGTCCTGCCGCATGTAAAGGTCAGCGTGCGGGACGGTGAACT
CATGGTCGACGGTAATCGCTTTCTGGGTTATCTGGGCGACCCTGCGAGTT
GGGGGTCAGGGCCGGTGGCCACGGGTGACCTCGGTCAGCTGGATGCCCAG
GGCTTCCTGACGGTATCCGGTCGGCGCAAAAACCTGCTGATCAGCAGCTA
TGGACGTAATATTTCCCCGGAATGGGTGGAAAGCGAGCTACTTGCCGACG
GTTGTCTGTTGCTGGCCGTGGTACTCGGTGACGCTCGT
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