mRNA_M-pyrifera_M_contig83310.19459.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83310.19459.1
Unique NamemRNA_M-pyrifera_M_contig83310.19459.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: A0A0P4WDC3_SCYOL (Na_H_Exchanger domain-containing protein n=6 Tax=Portunidae TaxID=6757 RepID=A0A0P4WDC3_SCYOL)

HSP 1 Score: 159 bits (402), Expect = 6.310e-42
Identity = 91/207 (43.96%), Postives = 141/207 (68.12%), Query Frame = 1
Query:    1 NSMGLVVLYLSSILFGRICTNFGIPPLVGMILAGFVFGNVPGIDVARH-IDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWVALRGPVELILGSLYGVGVGYL 618
            N   L VLY++++L GR     G+PPL+G ++AG +F +VPGI+   H +D+ W  V++ + L +IL  AGL +D  +L +   ++  LA +P +VEA VAAL++  +L +P L  F+LG V+AAVSPA+VVP +L+LA +G+GVE GIP+L+I+AAS+DDV+A++ F V +   LA  +  + W   +GP+E++ G +YGV  G L
Sbjct:  230 NLFSLAVLYVAAVLSGRAAAAVGMPPLLGSLVAGILFESVPGINAVGHNVDVFWSSVIRNLVLVIILLRAGLGLDPTALRKLSCVVLRLAFLPCVVEAVVAALMAKLLLSLPWLWSFMLGFVVAAVSPAVVVPGLLKLAEEGYGVEAGIPTLVIAAASLDDVLAITGFSVMMG--LAFAEGSLVWTLAKGPLEVVAGLVYGVVFGAL 434          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: A0A8B7NG08_HYAAZ (mitochondrial sodium/hydrogen exchanger 9B2-like isoform X2 n=3 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NG08_HYAAZ)

HSP 1 Score: 157 bits (398), Expect = 8.180e-42
Identity = 92/207 (44.44%), Postives = 141/207 (68.12%), Query Frame = 1
Query:    1 NSMGLVVLYLSSILFGRICTNFGIPPLVGMILAGFVFGNVPGIDV-ARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWVALRGPVELILGSLYGVGVGYL 618
            N   L+V+++ S++ G+I    G+PPL+GM+LAG    + PGI +    +DL +   ++ IAL VIL  AGL +D  +L    +++  LA VP LVEA V A++S ++L  P L GF+LG VL+AVSPA+VVP +L+L+  G+GV+KGIP+L+I+AASIDDV+A+S FGV L +  +  +  + W  L GP+E+++G  YG  +G++
Sbjct:  131 NLFSLLVVFVCSVIGGKITEACGLPPLLGMLLAGIALRSFPGIRIIGESLDLNYSASIRNIALVVILLRAGLGLDPKALKAMSLVVFRLACVPCLVEAIVGAIVSHFLLGFPWLWGFMLGFVLSAVSPAVVVPCLLQLSQQGYGVDKGIPTLVIAAASIDDVIAISGFGVMLGMTFS--EGSLTWQILHGPLEVVMGLSYGAVMGFI 335          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: A0A3N0XMM0_ANAGA (Sodium/hydrogen exchanger 9B2 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XMM0_ANAGA)

HSP 1 Score: 156 bits (394), Expect = 9.100e-42
Identity = 95/212 (44.81%), Postives = 145/212 (68.40%), Query Frame = 1
Query:    1 NSMGLVVLYLSSI----LFGRI-CTNFG-IPPLVGMILAGFVFGNVPGIDVARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWV-ALRGPVELILGSLYGVGVGY 615
            N  G+V L++ S+    LFGRI   N   +PPL+GM+LAGF+  N+P +  A +ID+ W   L+ IALGVIL  AGL++D  +L + + +   L++ PL  EA+  A++S+ IL +P + GF+LG VL AVSPA+VVPS+L L  +G+G+E+GIP+LL++A S+DD++A++ F  CL I  A+      W+  LRGP+E++ G++ GV +GY
Sbjct:   22 NLFGIVTLFICSVAGGKLFGRIHLPNMPPLPPLLGMLLAGFILRNIPVVTDAVYIDIRWSSSLRNIALGVILVKAGLQLDGKALKKLKAVCLRLSMFPLTFEATTMAVVSYLILGLPWVWGFILGFVLGAVSPAVVVPSMLLLHKEGYGLEQGIPTLLMAACSVDDIIAITCFTTCLGIAFATGA---VWLNVLRGPLEVLGGAVTGVALGY 230          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: A0A5A9PJX2_9TELE (Sodium/hydrogen exchanger 9B2 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9PJX2_9TELE)

HSP 1 Score: 157 bits (398), Expect = 9.310e-42
Identity = 95/212 (44.81%), Postives = 144/212 (67.92%), Query Frame = 1
Query:    1 NSMGLVVLYLSSI----LFGRICTNF--GIPPLVGMILAGFVFGNVPGIDVARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWV-ALRGPVELILGSLYGVGVGY 615
            N  G+V L++ S+    LFGRI       +PPL+GM+LAGFV  N+P +  A +ID+ W   L+ IAL VIL  AGLE+D  +L + + +   L+++PL  EA+  A++S ++L +P + GF+LG VL AVSPA+VVPS+L L  +G+GVE+GIP+LLI+A S DD++A++ F  CL +  A+ +    W+  LRGP+E++ G++ GV +GY
Sbjct:  127 NLFGIVTLFICSVAGGKLFGRIHLPKLPPLPPLLGMLLAGFVLRNIPVVTDAVYIDVRWSSSLRNIALAVILVKAGLELDGKALRKLKAVCLRLSILPLTCEATTMAVVSHFLLGLPWVWGFILGFVLGAVSPAVVVPSMLLLQKEGYGVEQGIPTLLIAACSCDDIIAITFFTTCLGVAFATGN---VWINVLRGPLEVLGGAVTGVALGY 335          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: A0A8C2EYF5_CYPCA (Na_H_Exchanger domain-containing protein n=13 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2EYF5_CYPCA)

HSP 1 Score: 157 bits (396), Expect = 1.480e-41
Identity = 98/212 (46.23%), Postives = 143/212 (67.45%), Query Frame = 1
Query:    1 NSMGLVVLYLSSI----LFGRI-CTNFG-IPPLVGMILAGFVFGNVPGIDVARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWV-ALRGPVELILGSLYGVGVGY 615
            N  G+V L++ S+    LFGRI   N   +PPL+GM+LAGF+  N+P +  A +ID+ W   L+ IALGVIL  AGLE+D  +L + +     L++ PL  EA+  A++S+ IL +P + GF+LG VL AVSPA+VVPS+L L  +G+G+E+GIP+LL++A SIDD++A++ F  CL I  A+      WV  LRGP+E++ G+  GV +GY
Sbjct:   91 NLFGIVTLFICSVAGGKLFGRIHFPNMPPLPPLLGMLLAGFILRNIPVVTDAVYIDVRWSASLRNIALGVILVKAGLELDERALKKLKTACLRLSMFPLTCEATTTAVVSYLILGLPWVWGFILGFVLGAVSPAVVVPSMLLLHKEGYGLEQGIPTLLMAACSIDDIIAITCFTTCLGIAFATGT---VWVNILRGPLEVLGGAATGVALGY 299          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: UPI000359A5E5 (sodium/hydrogen exchanger 9B2 isoform X2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359A5E5)

HSP 1 Score: 155 bits (393), Expect = 5.220e-41
Identity = 94/207 (45.41%), Postives = 136/207 (65.70%), Query Frame = 1
Query:    1 NSMGLVVLYLSSILFGRICTNFGIPPLVGMILAGFVFGNVPGIDVARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWVALRGPVELILGSLYGVGVGYLV 621
            N   +++L+++    G +     +PPL+GM+L G V GN P I+VAR ID  W    ++IAL +IL  AGL +D  +L +   ++  LA  P LVE  V  + S  IL +P   GF+LG V+AAVSPA+VVPS+L L+  G+GV+KGIP+L+I+AASIDDV+A++ FGV L I  +S +  I W   +GP+E I+G LYG+  GY++
Sbjct:  112 NLFAMLILFMACWCGGYLVGLVRLPPLLGMLLVGGVLGNAPHINVARDIDPVWSSGCRQIALTIILIRAGLGLDPKALKKLSFVVVRLAFSPCLVETIVDGIASHLILGLPWSWGFMLGFVIAAVSPAVVVPSLLSLSERGYGVDKGIPTLVIAAASIDDVLAITGFGVLLGISFSSGN--IVWTLFKGPIEAIVGVLYGIVGGYII 316          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: UPI0003596D97 (sodium/hydrogen exchanger 9B2 isoform X1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003596D97)

HSP 1 Score: 155 bits (393), Expect = 5.610e-41
Identity = 94/207 (45.41%), Postives = 136/207 (65.70%), Query Frame = 1
Query:    1 NSMGLVVLYLSSILFGRICTNFGIPPLVGMILAGFVFGNVPGIDVARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWVALRGPVELILGSLYGVGVGYLV 621
            N   +++L+++    G +     +PPL+GM+L G V GN P I+VAR ID  W    ++IAL +IL  AGL +D  +L +   ++  LA  P LVE  V  + S  IL +P   GF+LG V+AAVSPA+VVPS+L L+  G+GV+KGIP+L+I+AASIDDV+A++ FGV L I  +S +  I W   +GP+E I+G LYG+  GY++
Sbjct:  112 NLFAMLILFMACWCGGYLVGLVRLPPLLGMLLVGGVLGNAPHINVARDIDPVWSSGCRQIALTIILIRAGLGLDPKALKKLSFVVVRLAFSPCLVETIVDGIASHLILGLPWSWGFMLGFVIAAVSPAVVVPSLLSLSERGYGVDKGIPTLVIAAASIDDVLAITGFGVLLGISFSSGN--IVWTLFKGPIEAIVGVLYGIVGGYII 316          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: A0A498ML40_LABRO (Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498ML40_LABRO)

HSP 1 Score: 158 bits (399), Expect = 5.730e-41
Identity = 97/214 (45.33%), Postives = 146/214 (68.22%), Query Frame = 1
Query:    1 NSMGLVVLYLSSI----LFGRI-CTNFG-IPPLVGMILAGFVFGNVPGIDVARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWV-ALRGPVELILGSLYGVGVGYLV 621
            N  G+V L++ S+    LFGRI   N   +PPL+GM+LAGF+  N+P +  A +ID+ W   L+ IALGVIL  AGLE+D  +L + + +   L++ PL  EA+  A++S+ IL +P + GF+LG VL AVSPA+VVPS+L L  +G+G+E+GIP+LL++A S+DD++A++ F  CL I  AS      W+  LRGP+E++ G++ GV +GY +
Sbjct:  313 NLFGIVTLFICSVAGGKLFGRIRFPNVPPLPPLLGMLLAGFILRNIPVVTDAVYIDVRWSASLRNIALGVILVKAGLELDGKALRKLKAVCLRLSMFPLTFEATTMAVVSYLILGLPWVWGFILGFVLGAVSPAVVVPSMLLLQKEGYGLEQGIPTLLMAACSVDDIIAITCFTTCLGIAFASGS---VWLNILRGPLEVLGGAVAGVALGYFI 523          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: A0A444SF68_ARMVU (Mitochondrial sodium/hydrogen exchanger 9B2 (Fragment) n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444SF68_ARMVU)

HSP 1 Score: 155 bits (392), Expect = 6.660e-41
Identity = 93/201 (46.27%), Postives = 133/201 (66.17%), Query Frame = 1
Query:   13 LVVLYLSSILFGRICTNFGIPPLVGMILAGFVFGNVPGID-VARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWVALRGPVELILGSLYGVGVG 612
            L++L +++ L G +     +PPL+GM+L G +F + P ID + + I  EW   L+ +AL VIL  AGL +D  +L +   ++  LAV P LVE +  A++S  +LD P    FLLG +LAAVSPA+VVP +L LA  GFGVEKGIP+L+I+AASIDDV+A+S FGVCL  + ++      W  L+GP+E+ +G  YG+ VG
Sbjct:  185 LLILIVTAQLGGMLVAKIHLPPLLGMLLVGILFRSAPFIDTIGKSISTEWSSSLRSMALVVILIRAGLGLDPVALKKLSYVVLRLAVCPCLVETTTVAVVSHLLLDFPWKWAFLLGFILAAVSPAVVVPCLLNLADQGFGVEKGIPTLVIAAASIDDVIAISGFGVCLGTIFSNGSS--LWQGLKGPMEIGMGIAYGLIVG 383          
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Match: A7S114_NEMVE (Predicted protein (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7S114_NEMVE)

HSP 1 Score: 150 bits (379), Expect = 1.440e-40
Identity = 91/207 (43.96%), Postives = 136/207 (65.70%), Query Frame = 1
Query:    1 NSMGLVVLYLSSILFGRICTNFG---IPPLVGMILAGFVFGNVPGIDVARHIDLEWREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAALLSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLLISAASIDDVVAVSMFGVCLSILLASPDEPIAWVALRGPVELILGSLYGVGVG 612
            N  G+ ++ + +   G I T      +P L+GM++ GF+  NVPGIDVA+HID +W   L+ IAL VILA +GLE+D  +L   +     LA  P + EA   A++  ++LD+P L GF LG VL+AVSPA+VVP +L L   G+GVE+GIP+L+++A+S DDV+A+S+FGV + I  +  +  + +   RGP+ELI+G + G+ VG
Sbjct:   36 NLFGIFIILMCAAFGGFITTRVSCGVLPSLLGMLIVGFLLRNVPGIDVAKHIDKKWSATLRSIALVVILARSGLELDPGALRRLKFTCVRLAFGPCITEAVTVAVVVRYVLDMPWLWGFQLGFVLSAVSPAVVVPQLLVLQAKGYGVEQGIPTLVMAASSCDDVLAISLFGVFVGIAFSKGN--LYFNIFRGPIELIMGIVIGILVG 240          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83310.19459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P4WDC3_SCYOL6.310e-4243.96Na_H_Exchanger domain-containing protein n=6 Tax=P... [more]
A0A8B7NG08_HYAAZ8.180e-4244.44mitochondrial sodium/hydrogen exchanger 9B2-like i... [more]
A0A3N0XMM0_ANAGA9.100e-4244.81Sodium/hydrogen exchanger 9B2 n=1 Tax=Anabarilius ... [more]
A0A5A9PJX2_9TELE9.310e-4244.81Sodium/hydrogen exchanger 9B2 n=1 Tax=Triplophysa ... [more]
A0A8C2EYF5_CYPCA1.480e-4146.23Na_H_Exchanger domain-containing protein n=13 Tax=... [more]
UPI000359A5E55.220e-4145.41sodium/hydrogen exchanger 9B2 isoform X2 n=1 Tax=A... [more]
UPI0003596D975.610e-4145.41sodium/hydrogen exchanger 9B2 isoform X1 n=1 Tax=A... [more]
A0A498ML40_LABRO5.730e-4145.33Succinate--CoA ligase [ADP/GDP-forming] subunit al... [more]
A0A444SF68_ARMVU6.660e-4146.27Mitochondrial sodium/hydrogen exchanger 9B2 (Fragm... [more]
A7S114_NEMVE1.440e-4043.96Predicted protein (Fragment) n=2 Tax=Nematostella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83310contigM-pyrifera_M_contig83310:54..775 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score153.3
Seed ortholog evalue1.3e-34
Seed eggNOG ortholog6500.XP_005112306.1
Preferred nameSLC9B2
Hectar predicted targeting categorysignal peptide
GOsGO:0002682,GO:0002684,GO:0002761,GO:0002763,GO:0002790,GO:0002791,GO:0003008,GO:0003014,GO:0003096,GO:0003674,GO:0005215,GO:0005451,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005768,GO:0005794,GO:0005886,GO:0005903,GO:0005929,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006820,GO:0006821,GO:0006873,GO:0006885,GO:0006897,GO:0006898,GO:0006928,GO:0008021,GO:0008104,GO:0008150,GO:0008324,GO:0008509,GO:0009306,GO:0009987,GO:0010008,GO:0010348,GO:0010646,GO:0010720,GO:0010817,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015103,GO:0015108,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0015698,GO:0015833,GO:0016020,GO:0016192,GO:0016323,GO:0019725,GO:0019866,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0023051,GO:0030001,GO:0030003,GO:0030004,GO:0030133,GO:0030317,GO:0030641,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031410,GO:0031514,GO:0031966,GO:0031967,GO:0031975,GO:0031982,GO:0032501,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0034220,GO:0035725,GO:0036126,GO:0040011,GO:0042592,GO:0042802,GO:0042886,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044433,GO:0044440,GO:0044441,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045202,GO:0045595,GO:0045597,GO:0045637,GO:0045639,GO:0045670,GO:0045672,GO:0046873,GO:0046883,GO:0046903,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0048878,GO:0050708,GO:0050789,GO:0050793,GO:0050794,GO:0050796,GO:0050801,GO:0051046,GO:0051049,GO:0051094,GO:0051179,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051453,GO:0051674,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0060284,GO:0060341,GO:0061178,GO:0065007,GO:0065008,GO:0070201,GO:0070382,GO:0071702,GO:0071705,GO:0071804,GO:0071805,GO:0071944,GO:0072583,GO:0090087,GO:0090276,GO:0097223,GO:0097228,GO:0097458,GO:0097708,GO:0097722,GO:0097729,GO:0098588,GO:0098590,GO:0098655,GO:0098656,GO:0098657,GO:0098660,GO:0098661,GO:0098662,GO:0098771,GO:0098793,GO:0098805,GO:0098862,GO:0099501,GO:0099503,GO:0099516,GO:0120025,GO:0120038,GO:1902105,GO:1902107,GO:1902476,GO:1902600,GO:1903010,GO:1903012,GO:1903530,GO:1903706,GO:1903708,GO:2000026,GO:2001204,GO:2001206
EggNOG free text desc.lithium:proton antiporter activity
EggNOG OGs38B6Z@33154,3BC52@33208,3CSMF@33213,COG0025@1,KOG3826@2759
COG Functional cat.P
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons2
Model size636
Cds size630
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83310.19459.1prot_M-pyrifera_M_contig83310.19459.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83310 54..769 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.1063836-CDS-M-pyrifera_M_contig83310:53..5931622816740.1063836-CDS-M-pyrifera_M_contig83310:53..593Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83310 54..593 -
1692278150.1866727-CDS-M-pyrifera_M_contig83310:53..5931692278150.1866727-CDS-M-pyrifera_M_contig83310:53..593Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83310 54..593 -
1622816740.120351-CDS-M-pyrifera_M_contig83310:679..7691622816740.120351-CDS-M-pyrifera_M_contig83310:679..769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83310 680..769 -
1692278150.1978629-CDS-M-pyrifera_M_contig83310:679..7691692278150.1978629-CDS-M-pyrifera_M_contig83310:679..769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83310 680..769 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.1331825-UTR-M-pyrifera_M_contig83310:769..7751622816740.1331825-UTR-M-pyrifera_M_contig83310:769..775Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83310 770..775 -
1692278150.2070107-UTR-M-pyrifera_M_contig83310:769..7751692278150.2070107-UTR-M-pyrifera_M_contig83310:769..775Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83310 770..775 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83310.19459.1

>prot_M-pyrifera_M_contig83310.19459.1 ID=prot_M-pyrifera_M_contig83310.19459.1|Name=mRNA_M-pyrifera_M_contig83310.19459.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
MGLVVLYLSSILFGRICTNFGIPPLVGMILAGFVFGNVPGIDVARHIDLE
WREVLQKIALGVILALAGLEIDVASLLEEEVLIALLAVVPLLVEASVAAL
LSWWILDVPILVGFLLGAVLAAVSPAIVVPSVLELAHDGFGVEKGIPSLL
ISAASIDDVVAVSMFGVCLSILLASPDEPIAWVALRGPVELILGSLYGVG
VGYLVPIILP
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mRNA from alignment at M-pyrifera_M_contig83310:54..775-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83310.19459.1 ID=mRNA_M-pyrifera_M_contig83310.19459.1|Name=mRNA_M-pyrifera_M_contig83310.19459.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=722bp|location=Sequence derived from alignment at M-pyrifera_M_contig83310:54..775- (Macrocystis pyrifera P11B4 male)
AATTCTATGGGCTTGGTCGTTCTCTACCTTTCTTCTATCTTGTTTGGTCG CATATGCACCAATTTCGGGATCCCACCTCTCGTTGGAATGATTTTGGTAC ATACCCATCCCCCCTCCATCTCTCTTTCCACTTCATTTTCCCCGTGATGT GACGTCACCCACCCAATCCCCAATTCCTACAGGCTGGATTCGTATTTGGC AACGTCCCAGGGATTGATGTAGCACGTCACATTGACTTGGAGTGGCGGGA AGTGTTGCAAAAAATCGCCTTGGGTGTAATCTTGGCCCTAGCTGGACTGG AGATCGATGTTGCCTCTTTGTTGGAGGAAGAGGTGCTGATTGCGCTCTTA GCAGTGGTTCCATTGTTAGTAGAAGCATCAGTGGCAGCATTATTGAGTTG GTGGATCTTGGATGTCCCCATTTTGGTGGGTTTTTTGCTCGGTGCAGTTT TGGCAGCAGTATCCCCAGCAATTGTGGTTCCTTCAGTGCTTGAATTGGCC CATGATGGATTTGGAGTAGAAAAAGGAATCCCTTCCCTATTGATTTCGGC CGCATCTATTGATGATGTCGTTGCTGTTTCTATGTTTGGTGTCTGCCTCA GCATTCTCCTTGCCAGTCCAGACGAACCGATTGCATGGGTAGCTCTCCGT GGTCCAGTAGAGCTTATTCTCGGATCACTTTATGGTGTCGGTGTTGGCTA TCTTGTTCCCATCATCCTCCCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83310:54..775-

>mRNA_M-pyrifera_M_contig83310.19459.1 ID=mRNA_M-pyrifera_M_contig83310.19459.1|Name=mRNA_M-pyrifera_M_contig83310.19459.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig83310:54..775- (Macrocystis pyrifera P11B4 male)
ATGGGCTTGGTCGTTCTCTACCTTTCTTCTATCTTGTTTGGTCGCATATG
CACCAATTTCGGGATCCCACCTCTCGTTGGAATGATTTTGATGGGCTTGG
TCGTTCTCTACCTTTCTTCTATCTTGTTTGGTCGCATATGCACCAATTTC
GGGATCCCACCTCTCGTTGGAATGATTTTGGCTGGATTCGTATTTGGCAA
CGTCCCAGGGATTGATGTAGCACGTCACATTGACTTGGAGTGGCGGGAAG
TGTTGCAAAAAATCGCCTTGGGTGTAATCTTGGCCCTAGCTGGACTGGAG
ATCGATGTTGCCTCTTTGTTGGAGGAAGAGGTGCTGATTGCGCTCTTAGC
AGTGGTTCCATTGTTAGTAGAAGCATCAGTGGCAGCATTATTGAGTTGGT
GGATCTTGGATGTCCCCATTTTGGTGGGTTTTTTGCTCGGTGCAGTTTTG
GCAGCAGTATCCCCAGCAATTGTGGTTCCTTCAGTGCTTGAATTGGCCCA
TGATGGATTTGGAGTAGAAAAAGGAATCCCTTCCCTATTGATTTCGGCCG
CATCTATTGATGATGTCGTTGCTGTTTCTATGTTTGGTGTCTGCCTCAGC
ATTCTCCTTGCCAGTCCAGACGAACCGATTGCATGGGTAGCTCTCCGTGG
TCCAGTAGAGCTTATTCTCGGATCACTTTATGGTGTCGGTGTTGGCTATC
TTGTTCCCATCATCCTCCCTGCTGGATTCGTATTTGGCAACGTCCCAGGG
ATTGATGTAGCACGTCACATTGACTTGGAGTGGCGGGAAGTGTTGCAAAA
AATCGCCTTGGGTGTAATCTTGGCCCTAGCTGGACTGGAGATCGATGTTG
CCTCTTTGTTGGAGGAAGAGGTGCTGATTGCGCTCTTAGCAGTGGTTCCA
TTGTTAGTAGAAGCATCAGTGGCAGCATTATTGAGTTGGTGGATCTTGGA
TGTCCCCATTTTGGTGGGTTTTTTGCTCGGTGCAGTTTTGGCAGCAGTAT
CCCCAGCAATTGTGGTTCCTTCAGTGCTTGAATTGGCCCATGATGGATTT
GGAGTAGAAAAAGGAATCCCTTCCCTATTGATTTCGGCCGCATCTATTGA
TGATGTCGTTGCTGTTTCTATGTTTGGTGTCTGCCTCAGCATTCTCCTTG
CCAGTCCAGACGAACCGATTGCATGGGTAGCTCTCCGTGGTCCAGTAGAG
CTTATTCTCGGATCACTTTATGGTGTCGGTGTTGGCTATCTTGTTCCCAT
CATCCTCCCT
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