mRNA_M-pyrifera_M_contig83284.19450.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: A0A7Y3CTZ6_9ACTN (VWFA domain-containing protein (Fragment) n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7Y3CTZ6_9ACTN) HSP 1 Score: 258 bits (658), Expect = 2.130e-78 Identity = 143/274 (52.19%), Postives = 193/274 (70.44%), Query Frame = 1 Query: 7 SDRMFVRYEGSTDTSRIINTSIDVGSASVSYSHAGGVKLTKPVSFPAREIIEPSGFAFFRSDIGLYVALGLAFAAIGLAIFALGSLFAGGETSLEGLISRYSGDSIGDELDDDESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 SDR+ V Y+G TD + + ++ +G ASVS S+ GG +P++ EP F R+ +GL A + A++ALG++FA GE++LEG++ RYSG+ LD++E+AIVQTALV+RAVE+SESFAE+RGFL+++EE+LE+ ++PLR GEAMGL+A+ T+ VG + GG+ +F++RRR+RQFEQQLPD LQLLAGTLRAGYSLPQGLEAVSHEI++PMG+EL R MTEARLGR++EDAL ADRL Sbjct: 268 SDRLLVSYDGETDRTLRGDLTLTIGQASVSISYPGGRFTNQPLALTPIIDPEPGALGFVRTQMGLLATAVFAGLGVLAAVWALGNIFASGESTLEGMLRRYSGEE-DQPLDEEETAIVQTALVKRAVELSESFAEDRGFLVRIEEILEQGRIPLRAGEAMGLFALGTMAGFIVGFVFTGGIXXXXXXXXXXXXXXXXXXQFRARRRVRQFEQQLPDMLQLLAGTLRAGYSLPQGLEAVSHEIAEPMGYELTRAMTEARLGRDIEDALGGVADRL 540
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: A0A7Y2DP24_9ACTN (T2SSF domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DP24_9ACTN) HSP 1 Score: 246 bits (629), Expect = 9.620e-74 Identity = 138/275 (50.18%), Postives = 191/275 (69.45%), Query Frame = 1 Query: 10 DRMFVRYEGSTDTSRIINTSIDVGSASVSYSHAGGVKLTKPVSFPAREIIEPSGFAFFRSDIGLYVALGLAFAAIGL--AIFALGSLFAGGETSLEGLISRYSGDSIGDELDDDESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 DR+ V Y+G D + + S+ GG KP++ PS F RS GL A + F A+G+ A+++LG++FAGGE++LEG++ RYSG+ G+ELD++E+A+VQTALV++AVE++ESFAE+RGFL +VE++LE+ ++PLR GEAMG++ +IT+ A+G + G GLI + A ++ K+RRR++ FE QLPD LQLLAGTLRAGYSLPQGLEAVSHEI++PMG+EL R MTEARLGRE+E+AL A RL Sbjct: 267 DRLIVSYQGQVDLTERGDLXXXXXXXXXXXSYRGGRLTDKPLALEPIIDPPPSPLDFLRSSTGL--AATIVFTALGMLAAVWSLGNIFAGGESTLEGMLRRYSGEDDGEELDEEETALVQTALVKKAVELTESFAEDRGFLARVEDVLEQGRIPLRAGEAMGIFGMITMAGFALGFVFTGSFIRGLIVAGVAALGTTTGVQVKARRRIKAFEAQLPDMLQLLAGTLRAGYSLPQGLEAVSHEIAEPMGYELSRAMTEARLGREIEEALEGVATRL 539
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: A0A5Q2RF77_9ACTN (VWA domain-containing protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RF77_9ACTN) HSP 1 Score: 179 bits (455), Expect = 1.560e-48 Identity = 108/258 (41.86%), Postives = 160/258 (62.02%), Query Frame = 1 Query: 58 INTSIDVGSASVSYSHAGGVKLTKPVSFPAREIIEPSGFAFFRSDIGLYVALGLAFAAIGLAIFALGSLFAGGETSLEGLISRYSGDSIGDELDDD-ESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 ++ +DV AS S S G + EP G F R D GL + +GL A+ LAI+A+ SL SL+ ++ +Y+ + DD+ +S++ +TA ++RAV ++E FAE +G L K+E MLERA +PLR EA+ +A ++ + ++L L G ++ +IG + F + RR + FE QLPD LQLL+GTLRAGYSL QG+EAVS E+S+PMG ELRRV+TE+RLGR LE++L ++A+R+ Sbjct: 274 VDLELDVADASTSVSFVSGGVAEGAANLRPVTASEPGGVGFLR-DNGLLIGIGLVLLAVALAIYAVVSLLTPDAGSLDAVLEQYTEPAAPSPYDDEGDSSLAKTAFIQRAVSLTEGFAERQGLLAKIEAMLERANLPLRAAEALFFYAAGVGLLLLLALVLTRNLLGAVVVVLIGILIPPAVVNFLASRRQKAFESQLPDTLQLLSGTLRAGYSLMQGVEAVSREVSEPMGQELRRVVTESRLGRPLEESLEASAERM 530
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: A0A8F4FVH2_9ACTN (VWA domain-containing protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FVH2_9ACTN) HSP 1 Score: 176 bits (447), Expect = 2.320e-47 Identity = 116/270 (42.96%), Postives = 163/270 (60.37%), Query Frame = 1 Query: 19 FVRYEGSTDTSRIINTSIDVGSASVSYSHAGGVKLTKPVSFPAREIIEPSGFAFFRSDIGLYVALGLAFAAIGLAIFALGSLFAGGETSLEGLISRYSGDSIGDELDDDESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 +V ST T +N S+ VGS S G + + + + G + RS G +AL L A GL F++ +L +T L ++ Y + + D +SA+ QTAL++RAVE++E FA+ +G L KVE +LERA +PLR EA+ +A LVVG +G++ G + GGL+ +I A AL F + RR + F QLPD L LL+G+LRAGYSL QG+EAVS E+ +PMG ELRRV+TEARLGRE+EDA+ S A+R+ Sbjct: 269 YVATYASTATQGAVNVSVAVGSVEQQASFVVGSSVQGAATGQSVTADKAFGPEWLRSSGGALLALVLIGLAAGLGAFSIAALATKNDTGLSAMLRPYEEGGVSPD-DAGDSALAQTALLQRAVEITEDFAQRQGMLEKVENLLERADLPLRAAEALFFYAAGVLVVGLLGLVSFGPI-GGLVLLIIAALIPPAALSFIAGRRGKAFVGQLPDTLGLLSGSLRAGYSLMQGVEAVSQEVEEPMGKELRRVITEARLGREIEDAMDSVAERM 536
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: UPI001F171EC0 (type II secretion system F family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F171EC0) HSP 1 Score: 171 bits (432), Expect = 9.160e-46 Identity = 111/270 (41.11%), Postives = 161/270 (59.63%), Query Frame = 1 Query: 25 RYEGSTDTSRIINTSIDVGSASVSYSH-AGGVKLTKPVSFPAREIIEPSG-FAFFRSDIGLYVALGLAFAAIGLAIFALGSLFAGGETSLEGLISRYSGDSIGDELDDDESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 RY + +++VG S + +G + + KP PA + E SG AF + +GL V + LA A+G + + L ++ Y+ + +G++ D + ++V+T LV+RAVE++E A ERG L E LERA +PLR GEA+ + + +VV +G+ G L GGLI G + A + A+R + R ++F QLPD LQLL+GTL+AGYSL QG+EAVS E+ DPMG ELRRV+TEARLGR LE+AL A+R+ Sbjct: 178 RYRSEVPVGGVAELTLEVGGKSTAVDTVSGALTVGKPALQPA--VTESSGGIAFLQGGVGLAVGIVLALVAVGGXXXXXXXVVVK-DDGLSAVLRPYA-EPMGED-DAESDSLVRTPLVQRAVEITEQVAAERGLLATTENALERANLPLRAGEALFFYVALVVVVTVLGLAWFGSLVGGLILGALAAIIPVAAVRIMAGLRKKKFMSQLPDTLQLLSGTLKAGYSLMQGVEAVSQEVEDPMGTELRRVVTEARLGRPLEEALEGTAERM 442
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: A0A6I3C580_9ACTN (VWA domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A6I3C580_9ACTN) HSP 1 Score: 171 bits (432), Expect = 3.290e-45 Identity = 101/226 (44.69%), Postives = 144/226 (63.72%), Query Frame = 1 Query: 160 EPSGFAFFRSDIGLYVALGLAFAAIGLAIFALGSLFAGGETSLEGLISRYSGDSIGDELDDDE---SAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 + SG AFF+ G+ +A+ L A L FALGSLF E L+ L+ Y+ E+D D + + ++AL +RAV++ + AE +G L K E++LE+A +PLR EA+ + + L VG+L L GGL+ GVIGA L F ++RR ++F QLPD L LLAGTLRAGYS QG+EA S E+ +PMG ELRR++TEA+LGR LE+A+ ++A+R+ Sbjct: 322 DTSGLAFFQGGQGIAIAMILGAGAAALGAFALGSLFVKQEDRLQSLLQPYA------EVDPDAIKGNTLAKSALFQRAVKIMSNIAERQGVLDKAEKLLEQANLPLRAAEALMFYVGVVLASTVVGLLFQRSLLGGLVLGVIGALAPPAVLNFLAKRRRKRFMMQLPDTLTLLAGTLRAGYSFMQGVEATSREVEEPMGAELRRIITEAQLGRPLEEAMDASAERM 541
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: UPI001C62524A (type II secretion system F family protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C62524A) HSP 1 Score: 170 bits (430), Expect = 5.660e-45 Identity = 105/219 (47.95%), Postives = 148/219 (67.58%), Query Frame = 1 Query: 175 AFFRSDIGLYVALGLAFAAIGLAIFALGSLFAGGETSLEGLISRYSGDSIGDELDDDESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFA-LRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 +F R GL V G+ A+ LA+ A+ ++ + + SL+ ++ +Y+ D +DDD ++ QTA V+RAVE++E A ++G L+KVE+ LERA +PLR EA+ + LVV +G++L G + GL+FG + F A L F RR +QF QLPD LQLL+G+LRAGYSL QG++AVS E+ PMG ELRRVMTEARLGRELEDAL ++A+R+ Sbjct: 317 SFVRGTAGLIVVAGVGGLAVVLAVVAIATIASKEDHSLDRMLQQYTEPGHADLVDDD--SLAQTAFVQRAVELTEEIAAKQGLLVKVEKKLERADLPLRAAEAIFFYVAGALVVTVLGLVLMGLM--GLLFGALLGFGLPMAILNFLGGRRQKQFNTQLPDMLQLLSGSLRAGYSLVQGVDAVSAEVDGPMGRELRRVMTEARLGRELEDALEASAERV 531
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: A0A538JHA5_9ACTN (VWA domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JHA5_9ACTN) HSP 1 Score: 168 bits (425), Expect = 2.620e-44 Identity = 112/261 (42.91%), Postives = 154/261 (59.00%), Query Frame = 1 Query: 58 INTSIDVGSASVSYSHAGGVKLTKPVSFPAR-EIIEPSGFAFFRSDIGLYVALGLAFAAIGLAIFALGSLFAGGETSLEGLISRYSGDSIGDELDDD---ESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 I+ +D G SV G +T+ F AR +++E A F+ I ++ L AA GL +AL + ++LE + Y+ + G +++D + + +TA V+RAVEM+ FAEERG L VE LE+A +PLR EA+ W +V+ +G+ +FG L+ I A T L S RR R+F QLPD LQLL+G+LRAGYSL QG+EAVS E+SDPMG ELRRV+ EARLGR LED+LA A R+ Sbjct: 266 IDLEVDAGGLSVKAPSVGIGTVTE--GFSARPDVVESKTPALFKGAIAKWMVALLVLAAAGLLAYALILIVVRDMSTLENALQPYAAE--GPSMEEDGPSDVRMAETAFVKRAVEMTGRFAEERGLLQWVERQLEQADLPLRAAEAIFFWLSAIVVLTLLGLFSTRSIFGALVLLFIAAVTPAVVLSGLSSRRQRKFTSQLPDTLQLLSGSLRAGYSLLQGVEAVSQEVSDPMGQELRRVLAEARLGRPLEDSLADTAQRM 522
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: A0A7V9B6J2_9ACTN (Type II secretion system F family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9B6J2_9ACTN) HSP 1 Score: 168 bits (425), Expect = 2.890e-44 Identity = 107/267 (40.07%), Postives = 159/267 (59.55%), Query Frame = 1 Query: 37 STDTSR-IINTSIDVGSASVSYSHAGGVKLTKPVSFPAREIIEPSGFAFFRSDIGLYVALGLAFAAIGLAIFALGS--LFAGGETSLEGLISRYSGDSIGDELDDDESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 S+D +R I + S+ G S + S+ G L P R ++ G F ++D+ Y+A+ A A + A+FA G LF + L + YS + + D+ + Q+AL++RAV M+ESFA +RG L++VE+ LE+A +PLR GEAM + L+V + + L L + G+ L F + R+ ++F+ LPD LQLL+ TLRAGYS+ QG+EAVS E+S+PMG ELRRV+TEARLGR LE++L + ADR+ Sbjct: 267 SSDATRGIQDISVSAGEVSTAGSYVAGGSLEGPQRLAPRPTVDAGGIRFLQNDVAKYLAI--AAATLAAAMFAYGVILLFVRQDGDLTAALRPYSEEFVASGEDEGIQPMAQSALLQRAVAMTESFARQRGVLVRVEKALEKAGLPLRAGEAMFFYLATALLVIVLLLALTQNLMATAVLGLFAVLIPPAILNFFAERKKKKFQALLPDTLQLLSSTLRAGYSMMQGVEAVSQEVSEPMGAELRRVVTEARLGRPLEESLEAIADRM 531
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Match: UPI001E5D65C4 (type II secretion system F family protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E5D65C4) HSP 1 Score: 167 bits (423), Expect = 7.680e-44 Identity = 111/273 (40.66%), Postives = 165/273 (60.44%), Query Frame = 1 Query: 28 YEGSTDTSRIINTSIDVGSASVSYSHAGGVKLTKPVSFPAREIIEPSG-FAFFRSDIGLYVALGLAFAAIGLAIFALGSLFAGGETSLEGLISRYSG----DSIGDELDDD-ESAIVQTALVRRAVEMSESFAEERGFLLKVEEMLERAKVPLRPGEAMGLWAIITLVVGAVGMLLAGGLFGGLIFGVIGAFTQLFALRFKSRRRMRQFEQQLPDALQLLAGTLRAGYSLPQGLEAVSHEISDPMGFELRRVMTEARLGRELEDALASAADRL 828 Y+ D +++ +++VG S + S G + V+ EIIE SG + + ++GL + + A GL FA+ SLF E L ++ Y ++GD DDD ++++ +TA+V+RAV+++E A +RG L+KVE LERA +PLR GE + +A +++ + ++ G L GLI G+ A + F + RR +QF LPD L LL+GTLRAGYSL QG+EAVS E+++PMG ELRRV+TEARLGR LE+AL A R+ Sbjct: 294 YDAGVDPGTVVDLTLEVGGQSATASVVTGSSVQGEVALNP-EIIESSGGVSALQGNLGLIALVLVGLLAAGLFAFAIFSLFVR-EDRLAQVLQPYDDAMTTSALGDGADDDADTSLARTAIVQRAVQITEQVATDRGLLVKVENALERANLPLRAGEGLFFYAAGVVLLTILAFVVGGSLILGLIVGLFAAIVPPAVVNFLAARRRKQFMALLPDTLSLLSGTLRAGYSLMQGVEAVSQEVAEPMGTELRRVVTEARLGRPLEEALDYTAVRM 564 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83284.19450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83284.19450.1 >prot_M-pyrifera_M_contig83284.19450.1 ID=prot_M-pyrifera_M_contig83284.19450.1|Name=mRNA_M-pyrifera_M_contig83284.19450.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=271bp MFVRYEGSTDTSRIINTSIDVGSASVSYSHAGGVKLTKPVSFPAREIIEPback to top mRNA from alignment at M-pyrifera_M_contig83284:68..895+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83284.19450.1 ID=mRNA_M-pyrifera_M_contig83284.19450.1|Name=mRNA_M-pyrifera_M_contig83284.19450.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig83284:68..895+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83284:68..895+ >mRNA_M-pyrifera_M_contig83284.19450.1 ID=mRNA_M-pyrifera_M_contig83284.19450.1|Name=mRNA_M-pyrifera_M_contig83284.19450.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1626bp|location=Sequence derived from alignment at M-pyrifera_M_contig83284:68..895+ (Macrocystis pyrifera P11B4 male)back to top |