mRNA_M-pyrifera_M_contig83232.19438.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83232.19438.1
Unique NamemRNA_M-pyrifera_M_contig83232.19438.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A4P9W577_9FUNG (Concanavalin A-like lectin/glucanase domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W577_9FUNG)

HSP 1 Score: 224 bits (570), Expect = 1.270e-69
Identity = 107/181 (59.12%), Postives = 127/181 (70.17%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTE-------PLYPTVGLRTPGEVVEANFGQRPFCFDI 525
            P+ W+ KDK   L L  S LRV Y G+ K + DAAAVRA+ PIPP  G+FY+EV +V KGRD +IGIG C  N  LGRLPGW+EHS+GYH DDG  F  SG G+ YGPT+ TGD +GCC+NF  N V +T+NG  LGVAFR I  +        LYP+VGLRTPGE+VEANFGQ  F FDI
Sbjct:    2 PTCWNPKDKAPTLDLSASSLRVVYSGTGKDDKDAAAVRANHPIPPQCGLFYYEVTVVSKGRDGYIGIGFCIQNVKLGRLPGWEEHSWGYHGDDGHTFSCSGTGKAYGPTYATGDVIGCCINFMTNEVSFTKNGVYLGVAFRDIFKDNKGQKSYQLYPSVGLRTPGEIVEANFGQSKFKFDI 182
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A2I4AKF3_9TELE (ran-binding protein 10 n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4AKF3_9TELE)

HSP 1 Score: 219 bits (557), Expect = 5.150e-69
Identity = 105/174 (60.34%), Postives = 128/174 (73.56%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDI 525
            P +WS KDK  ++ L ++ LRV YKG  K   DAA+VRA  PIP + GI+Y+EV IV KGRD ++GIGL A   ++ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGD +GCCVN  +N+  YT+NG  LGVAF   L   LYPTVGL+TPGE+V+ANFGQ+PF FDI
Sbjct:   46 PRSWSPKDKYSYIGLSQNNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGISLGVAFTD-LPPNLYPTVGLQTPGEIVDANFGQQPFVFDI 218
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A222AJ48_SPOLI (Ran-binding protein (Fragment) n=1 Tax=Spodoptera littoralis TaxID=7109 RepID=A0A222AJ48_SPOLI)

HSP 1 Score: 223 bits (567), Expect = 5.630e-69
Identity = 106/178 (59.55%), Postives = 131/178 (73.60%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDIAGLI 537
            P +WS KDK  ++ L ++ LRV YKG  K   DAA+VRA  PIP + G++Y+EV IV KGRD ++GIGL A   ++ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGD +GC VN  DN+  YT+NG  LG+AFRG L   LYPTVGL+TPGEVV+ANFGQ+PF FDI  ++
Sbjct:   40 PRSWSTKDKFSYIGLSQNNLRVHYKGHGKTHKDAASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIAFRG-LPPNLYPTVGLQTPGEVVDANFGQQPFVFDIEDML 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A212EK36_DANPL (Putative Ran-binding protein n=1 Tax=Danaus plexippus plexippus TaxID=278856 RepID=A0A212EK36_DANPL)

HSP 1 Score: 223 bits (567), Expect = 9.010e-69
Identity = 106/178 (59.55%), Postives = 131/178 (73.60%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDIAGLI 537
            P +WS KDK  ++ L ++ LRV YKG  K   DAA+VRA  PIP + G++Y+EV IV KGRD ++GIGL A   ++ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGD +GC VN  DN+  YT+NG  LG+AFRG L   LYPTVGL+TPGEVV+ANFGQ+PF FDI  ++
Sbjct:   40 PRSWSTKDKFSYIGLSQNNLRVHYKGHGKTHKDAASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIAFRG-LPPNLYPTVGLQTPGEVVDANFGQQPFVFDIEDML 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A0B6ZI30_9EUPU (B30.2/SPRY domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZI30_9EUPU)

HSP 1 Score: 218 bits (555), Expect = 1.000e-68
Identity = 106/174 (60.92%), Postives = 126/174 (72.41%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDI 525
            P +WS KDK   + L ++ LRV YKG  K   DAA+VRA   IP S GI+Y+EV ++ KGRD ++GIGL A   S+ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGDT+GCC+N  DN+  YT+NG  LG+AF   L   LYPTVGL+TPGEVVEANFGQ PF FDI
Sbjct:   39 PRSWSPKDKFNFIGLSQNNLRVHYKGVGKTHKDAASVRATHAIPASCGIYYFEVKVISKGRDGYMGIGLSAQVVSMNRLPGWDKHSYGYHGDDGNSFCSSGAGQPYGPTFTTGDTIGCCINLIDNTCFYTKNGINLGIAFTD-LPPNLYPTVGLQTPGEVVEANFGQMPFVFDI 211
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A2D4KJ24_9SAUR (B30.2/SPRY domain-containing protein (Fragment) n=1 Tax=Micrurus paraensis TaxID=1970185 RepID=A0A2D4KJ24_9SAUR)

HSP 1 Score: 219 bits (557), Expect = 1.120e-68
Identity = 105/174 (60.34%), Postives = 127/174 (72.99%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDI 525
            P +WS KDK  ++ L ++ LRV YKG  K   DAA+VRA  PIP + GI+Y+EV IV KGRD ++GIGL A   ++ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGD +GCCVN  +N+  YT+NG  LG+AF   L   LYPTVGL+TPGEVV+ANFGQ PF FDI
Sbjct:   47 PRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTD-LPPNLYPTVGLQTPGEVVDANFGQHPFVFDI 219
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A1E1WUT5_PECGO (Uncharacterized protein (Fragment) n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WUT5_PECGO)

HSP 1 Score: 222 bits (565), Expect = 1.330e-68
Identity = 106/178 (59.55%), Postives = 130/178 (73.03%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDIAGLI 537
            P +WS KDK  ++ L ++ LRV YKG  K   DAA+VRA  PIP + G++Y+EV IV KGRD ++GIGL A   ++ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGD +GC VN  DN+  YT+NG  LG+AFRG L   LYPTVGL+TPGEVV+ANFGQ PF FDI  ++
Sbjct:   40 PRSWSTKDKFSYIGLSQNNLRVHYKGHGKTHKDAASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHLGIAFRG-LPPNLYPTVGLQTPGEVVDANFGQAPFVFDIEDML 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A401NL07_SCYTO (Uncharacterized protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401NL07_SCYTO)

HSP 1 Score: 219 bits (558), Expect = 1.790e-68
Identity = 104/174 (59.77%), Postives = 128/174 (73.56%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDI 525
            P +WS KDK  ++ L ++ LRV YKG  K   DAA+VRA  PIP + GI+Y+EV IV KGRD ++GIGL A   ++ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGD +GCCVN  +N+  YT+NG  LG+AF   L   LYPTVGL+TPGE+V+ANFGQ+PF FDI
Sbjct:   40 PRSWSPKDKYNYIGLSQNNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTD-LPPNLYPTVGLQTPGEIVDANFGQQPFVFDI 212
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: UPI001C34B5C9 (Uncharacterized protein n=3 Tax=Manduca sexta TaxID=7130 RepID=UPI001C34B5C9)

HSP 1 Score: 221 bits (564), Expect = 2.550e-68
Identity = 106/178 (59.55%), Postives = 130/178 (73.03%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDIAGLI 537
            P +WS KDK  ++ L ++ LRV YKG  K   DAA+VRA  PIP + G++Y+EV IV KGRD ++GIGL A   ++ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGD +GC VN  DN+  YT+NG  LGVAFRG L   LYPTVGL+TPGEVV+ NFGQ+PF FDI  ++
Sbjct:   47 PRSWSTKDKFSYIGLSQNNLRVHYKGHGKTHRDAASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCGVNLVDNTCFYTKNGHHLGVAFRG-LPPNLYPTVGLQTPGEVVDTNFGQQPFVFDIEDML 223
[Close]
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Match: A0A0B6ZK90_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZK90_9EUPU)

HSP 1 Score: 219 bits (557), Expect = 5.160e-68
Identity = 106/174 (60.92%), Postives = 128/174 (73.56%), Query Frame = 1 
Query:    7 PSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAGIFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFKGSG-GECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLYPTVGLRTPGEVVEANFGQRPFCFDI 525
            P +WS KDK  ++ L ++ LRV YKG  K   DAA+VRA  PIP + GI+Y+EV I+ KGRD ++GIGL A   ++ RLPGWD+HSYGYH DDG  F  SG G+ YGPTFTTGDT+GCCVN  D++  YT+NG  LG+AF   L   LYPTVGL+TPGEVVEANFGQ PF FDI
Sbjct:   41 PRSWSPKDKFNYIGLSQNNLRVHYKGVGKTHKDAASVRATNPIPAACGIYYFEVKIISKGRDGYMGIGLSAQIVNMNRLPGWDKHSYGYHGDDGNSFCSSGAGQPYGPTFTTGDTIGCCVNMIDSTCFYTKNGVSLGIAFTD-LPPNLYPTVGLQTPGEVVEANFGQSPFVFDI 213
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83232.19438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4P9W577_9FUNG1.270e-6959.12Concanavalin A-like lectin/glucanase domain-contai... [more]
A0A2I4AKF3_9TELE5.150e-6960.34ran-binding protein 10 n=1 Tax=Austrofundulus limn... [more]
A0A222AJ48_SPOLI5.630e-6959.55Ran-binding protein (Fragment) n=1 Tax=Spodoptera ... [more]
A0A212EK36_DANPL9.010e-6959.55Putative Ran-binding protein n=1 Tax=Danaus plexip... [more]
A0A0B6ZI30_9EUPU1.000e-6860.92B30.2/SPRY domain-containing protein (Fragment) n=... [more]
A0A2D4KJ24_9SAUR1.120e-6860.34B30.2/SPRY domain-containing protein (Fragment) n=... [more]
A0A1E1WUT5_PECGO1.330e-6859.55Uncharacterized protein (Fragment) n=1 Tax=Pectino... [more]
A0A401NL07_SCYTO1.790e-6859.77Uncharacterized protein n=1 Tax=Scyliorhinus toraz... [more]
UPI001C34B5C92.550e-6859.55Uncharacterized protein n=3 Tax=Manduca sexta TaxI... [more]
A0A0B6ZK90_9EUPU5.160e-6860.92Uncharacterized protein (Fragment) n=1 Tax=Arion v... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83232contigM-pyrifera_M_contig83232:151..767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score225.3
Seed ortholog evalue2.2e-56
Seed eggNOG ortholog8364.ENSXETP00000004846
Preferred nameRANBP9
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000165,GO:0000226,GO:0000902,GO:0000904,GO:0001654,GO:0001932,GO:0001933,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005856,GO:0005875,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007154,GO:0007155,GO:0007165,GO:0007259,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007299,GO:0007304,GO:0007306,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007610,GO:0007631,GO:0008150,GO:0008152,GO:0008536,GO:0009605,GO:0009653,GO:0009888,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0010927,GO:0015630,GO:0016020,GO:0016043,GO:0016310,GO:0017016,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0022610,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030154,GO:0030182,GO:0030536,GO:0030537,GO:0030703,GO:0030707,GO:0030855,GO:0031109,GO:0031175,GO:0031267,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0032991,GO:0034622,GO:0035556,GO:0036211,GO:0040011,GO:0042221,GO:0042325,GO:0042326,GO:0042330,GO:0042592,GO:0043010,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043408,GO:0043409,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045936,GO:0046785,GO:0046843,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051258,GO:0051704,GO:0051716,GO:0060041,GO:0060249,GO:0060250,GO:0060255,GO:0060429,GO:0061564,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070372,GO:0070373,GO:0071704,GO:0071840,GO:0080090,GO:0090136,GO:0097435,GO:0097485,GO:0097696,GO:0098609,GO:0098772,GO:0120036,GO:0120039,GO:1901564,GO:1902531,GO:1902532
EggNOG free text desc.RAN binding protein 9
EggNOG OGs38DWC@33154,3BBKA@33208,3CRPE@33213,484CM@7711,4951C@7742,KOG1477@1,KOG1477@2759
COG Functional cat.S
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
Exons2
Model size537
Cds size537
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816739.1443026-CDS-M-pyrifera_M_contig83232:150..4981622816739.1443026-CDS-M-pyrifera_M_contig83232:150..498Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83232 151..498 -
1692278149.679507-CDS-M-pyrifera_M_contig83232:150..4981692278149.679507-CDS-M-pyrifera_M_contig83232:150..498Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83232 151..498 -
1622816739.156192-CDS-M-pyrifera_M_contig83232:578..7671622816739.156192-CDS-M-pyrifera_M_contig83232:578..767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83232 579..767 -
1692278149.690322-CDS-M-pyrifera_M_contig83232:578..7671692278149.690322-CDS-M-pyrifera_M_contig83232:578..767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83232 579..767 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83232.19438.1prot_M-pyrifera_M_contig83232.19438.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83232 151..767 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83232.19438.1

>prot_M-pyrifera_M_contig83232.19438.1 ID=prot_M-pyrifera_M_contig83232.19438.1|Name=mRNA_M-pyrifera_M_contig83232.19438.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
RRPSAWSQKDKCKHLTLDESLLRVSYKGSRKYENDAAAVRADCPIPPSAG
IFYWEVHIVDKGRDRHIGIGLCAANTSLGRLPGWDEHSYGYHADDGFLFK
GSGGECYGPTFTTGDTVGCCVNFRDNSVLYTRNGKRLGVAFRGILTEPLY
PTVGLRTPGEVVEANFGQRPFCFDIAGLI
back to top

mRNA from alignment at M-pyrifera_M_contig83232:151..767-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83232.19438.1 ID=mRNA_M-pyrifera_M_contig83232.19438.1|Name=mRNA_M-pyrifera_M_contig83232.19438.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=617bp|location=Sequence derived from alignment at M-pyrifera_M_contig83232:151..767- (Macrocystis pyrifera P11B4 male)
CGGAGGCCCTCGGCGTGGAGCCAGAAGGACAAGTGCAAGCACCTGACGCT
GGACGAGTCGCTGCTGCGCGTCTCCTACAAGGGCAGCCGCAAGTACGAAA
ACGACGCCGCCGCCGTGCGTGCCGACTGTCCCATCCCGCCCTCTGCAGGC
ATCTTCTACTGGGAAGTGCACATCGTGGACAAGGGCCGCGTTGGGTACGC
ACCTTCCTCAACCTCCCCCCTCCCCCCCCCTCCGCCGCCGCCGCCACGGC
CAGGGCAGGGGCTGACGAGGACAGACACATTGGCATCGGGCTGTGCGCGG
CGAATACGTCGCTGGGAAGGCTGCCAGGCTGGGACGAGCACTCGTACGGC
TACCACGCCGACGACGGCTTCCTCTTCAAGGGCAGCGGCGGCGAGTGCTA
CGGCCCCACCTTCACCACGGGCGATACTGTGGGCTGCTGCGTGAACTTCC
GCGACAACAGTGTGCTCTACACGCGCAACGGCAAGCGGCTGGGCGTCGCC
TTCCGCGGCATTCTCACCGAGCCCCTCTACCCCACCGTGGGCCTCCGCAC
GCCGGGCGAGGTGGTCGAGGCCAACTTCGGCCAGCGGCCCTTCTGCTTCG
ACATCGCCGGCCTCATC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig83232:151..767-

>mRNA_M-pyrifera_M_contig83232.19438.1 ID=mRNA_M-pyrifera_M_contig83232.19438.1|Name=mRNA_M-pyrifera_M_contig83232.19438.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig83232:151..767- (Macrocystis pyrifera P11B4 male)
CGGAGGCCCTCGGCGTGGAGCCAGAAGGACAAGTGCAAGCACCTGACGCT
GGACGAGTCGCTGCTGCGCGTCTCCTACAAGGGCAGCCGCAAGTACGAAA
ACGACGCCGCCGCCGTGCGTGCCGACTGTCCCATCCCGCCCTCTGCAGGC
ATCTTCTACTGGGAAGTGCACATCGTGGACAAGGGCCGCCGGAGGCCCTC
GGCGTGGAGCCAGAAGGACAAGTGCAAGCACCTGACGCTGGACGAGTCGC
TGCTGCGCGTCTCCTACAAGGGCAGCCGCAAGTACGAAAACGACGCCGCC
GCCGTGCGTGCCGACTGTCCCATCCCGCCCTCTGCAGGCATCTTCTACTG
GGAAGTGCACATCGTGGACAAGGGCCGCGACAGACACATTGGCATCGGGC
TGTGCGCGGCGAATACGTCGCTGGGAAGGCTGCCAGGCTGGGACGAGCAC
TCGTACGGCTACCACGCCGACGACGGCTTCCTCTTCAAGGGCAGCGGCGG
CGAGTGCTACGGCCCCACCTTCACCACGGGCGATACTGTGGGCTGCTGCG
TGAACTTCCGCGACAACAGTGTGCTCTACACGCGCAACGGCAAGCGGCTG
GGCGTCGCCTTCCGCGGCATTCTCACCGAGCCCCTCTACCCCACCGTGGG
CCTCCGCACGCCGGGCGAGGTGGTCGAGGCCAACTTCGGCCAGCGGCCCT
TCTGCTTCGACATCGCCGGCCTCATCGACAGACACATTGGCATCGGGCTG
TGCGCGGCGAATACGTCGCTGGGAAGGCTGCCAGGCTGGGACGAGCACTC
GTACGGCTACCACGCCGACGACGGCTTCCTCTTCAAGGGCAGCGGCGGCG
AGTGCTACGGCCCCACCTTCACCACGGGCGATACTGTGGGCTGCTGCGTG
AACTTCCGCGACAACAGTGTGCTCTACACGCGCAACGGCAAGCGGCTGGG
CGTCGCCTTCCGCGGCATTCTCACCGAGCCCCTCTACCCCACCGTGGGCC
TCCGCACGCCGGGCGAGGTGGTCGAGGCCAACTTCGGCCAGCGGCCCTTC
TGCTTCGACATCGCCGGCCTCATC
back to top